RNA–Protein interactions for RNA: ENST00000498594.5

CRAMP1-208, Transcript of cramped chromatin regulator homolog 1, human

TSL 4

Gene CRAMP1, Length 559 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRAMP1-208	ENST00000498594	IDH3B	O43837	385 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	CTNND1	O60716	968 aa	Known RBP	4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	USO1	O60763	962 aa	Known RBP	4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	RNF40	O75150	1001 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	PEX14	O75381	377 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	CDC45	O75419	566 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	SEC31A	O94979	1220 aa	Known RBP	4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	CD2BP2	O95400	341 aa	Known RBP	4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	BAG3	O95817	575 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	GSTA1	P08263	222 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	PDGFRB	P09619	1106 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	LINGO3	P0C6S8	592 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	COL6A1	P12109	1028 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	MYCLP1	P12525	358 aa	Predicted RBP	4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	SLC5A1	P13866	664 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	CCND1	P24385	295 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	ERCC5	P28715	1186 aa	Predicted RBP	4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	HSPA4	P34932	840 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	MATR3	P43243	847 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	BTD	P43251	543 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	CD97	P48960	835 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	TIMM10	P62072	90 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	CDK17	Q00537	523 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	MAP3K10	Q02779	954 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	FAM160A1	Q05DH4	1040 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	LRMP	Q12912	555 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	CASP8	Q14790	479 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	NONO	Q15233	471 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	SHH	Q15465	462 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	NDUFA5	Q16718	116 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	FAM110C	Q1W6H9	321 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	TSR1	Q2NL82	804 aa	Known RBP	4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594		Q3C1V9	767 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	C9orf50	Q5SZB4	431 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	MAP3K21	Q5TCX8	1036 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	ANO1	Q5XXA6	986 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	NCAPH2	Q6IBW4	605 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	C6orf89	Q6UWU4	347 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	TBC1D9	Q6ZT07	1266 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	ZNF365	Q70YC5	407 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	NLRP9	Q7RTR0	991 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	NANOGNB	Q7Z5D8	188 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	SRGAP1	Q7Z6B7	1085 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	C11orf74	Q86VG3	221 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	TTC30A	Q86WT1	665 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	LURAP1L	Q8IV03	231 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	SLC15A3	Q8IY34	581 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	FAM186B	Q8IYM0	893 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	ALDH16A1	Q8IZ83	802 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	SYCP3	Q8IZU3	236 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	MRPL50	Q8N5N7	158 aa	Known RBP	4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	ARL10	Q8N8L6	244 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	SLC43A3	Q8NBI5	491 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	RASSF8	Q8NHQ8	419 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	GDAP1	Q8TB36	358 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	CCDC110	Q8TBZ0	833 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	NSMCE1	Q8WV22	266 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	MYLIP	Q8WY64	445 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	LPIN2	Q92539	896 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	SNF8	Q96H20	258 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	EPSTI1	Q96J88	318 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	RPGRIP1	Q96KN7	1286 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	PPP1R13B	Q96KQ4	1090 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	CDX2	Q99626	313 aa	Predicted RBP	4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	IDI2	Q9BXS1	227 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	YIPF3	Q9GZM5	350 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	SENP6	Q9GZR1	1112 aa	Predicted RBP	4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	PORCN	Q9H237	461 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	VRTN	Q9H8Y1	702 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	4.07	□□□□□ -1.76	4e-9	■■■■■ 45.4
CRAMP1-208	ENST00000498594	PARVB	Q9HBI1	364 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	PRDM6	Q9NQX0	595 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	SLC5A4	Q9NY91	659 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	RTEL1	Q9NZ71	1219 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	FLRT1	Q9NZU1	646 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	MYO1A	Q9UBC5	1043 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	HESX1	Q9UBX0	185 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	HERC5	Q9UII4	1024 aa	Known RBP	4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	MAFF	Q9ULX9	164 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	PA2G4	Q9UQ80	394 aa	Known RBP	4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	R3HDM2	Q9Y2K5	976 aa	Known RBP	4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	SLC45A1	Q9Y2W3	748 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	NOSIP	Q9Y314	301 aa	Known RBP	4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	PCDHB15	Q9Y5E8	787 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	SPO11	Q9Y5K1	396 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	USP34	Q70CQ2	3546 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	TET1	Q8NFU7	2136 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	MYH6	P13533	1939 aa		4.07	□□□□□ -1.76
CRAMP1-208	ENST00000498594	CACNA1A	O00555	2505 aa		4.06	□□□□□ -1.76
CRAMP1-208	ENST00000498594	GAK	O14976	1311 aa		4.06	□□□□□ -1.76
CRAMP1-208	ENST00000498594	CCDC69	A6NI79	296 aa		4.06	□□□□□ -1.76
CRAMP1-208	ENST00000498594	AP5Z1	O43299	807 aa		4.06	□□□□□ -1.76
CRAMP1-208	ENST00000498594	SGTA	O43765	313 aa		4.06	□□□□□ -1.76
CRAMP1-208	ENST00000498594	ENTPD3	O75355	529 aa		4.06	□□□□□ -1.76
CRAMP1-208	ENST00000498594	MTA2	O94776	668 aa		4.06	□□□□□ -1.76
CRAMP1-208	ENST00000498594	ANP32D	O95626	131 aa		4.06	□□□□□ -1.76
CRAMP1-208	ENST00000498594	ALDH2	P05091	517 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms