RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 NXF1Q9UBU9 619 aaKnown RBP10.32□□□□□ -0.76
GAPVD1-219ENST00000495955 MYH13Q9UKX3 1938 aa10.32□□□□□ -0.76
GAPVD1-219ENST00000495955 FAM170AA1A519 330 aa10.32□□□□□ -0.76
GAPVD1-219ENST00000495955 LACTBP83111 547 aaPredicted RBP10.32□□□□□ -0.76
GAPVD1-219ENST00000495955 MYO1EQ12965 1108 aa10.32□□□□□ -0.76
GAPVD1-219ENST00000495955 BFSP2Q13515 415 aa10.32□□□□□ -0.76
GAPVD1-219ENST00000495955 KNOP1Q1ED39 458 aaKnown RBP10.32□□□□□ -0.76
GAPVD1-219ENST00000495955 ALS2CR12Q96Q35 445 aa10.32□□□□□ -0.76
GAPVD1-219ENST00000495955 NACA2Q9H009 215 aa10.32□□□□□ -0.76
GAPVD1-219ENST00000495955 TMEM110-MUSTN1A8MSY1 372 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 VTNP04004 478 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 INSRRP14616 1297 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 PSEN2P49810 448 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 GRIK4Q16099 956 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 SIAH1Q8IUQ4 282 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 HPS3Q969F9 1004 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 SAAL1Q96ER3 474 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 MAML3Q96JK9 1138 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 TUBGCP2Q9BSJ2 902 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 ZNF214Q9UL59 606 aaPredicted RBP10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 MYMKA6NI61 221 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 GJC1P36383 396 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 ZNF445P59923 1031 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 LRRC63Q05C16 580 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 FUT2Q10981 343 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 TRIM14Q14142 442 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 DSTYKQ6XUX3 929 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 PPP4R3CPQ6ZMV5 832 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 PPP1R13LQ8WUF5 828 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 TRIM9Q9C026 710 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 TXNRD2Q9NNW7 524 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 AFPP02771 609 aaKnown RBP10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 NR3C1P04150 777 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 LGALS2P05162 132 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 IFRD2Q12894 506 aaPredicted RBP10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 C11orf57Q6ZUT1 292 aaPredicted RBP10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 OTOP1Q7RTM1 612 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 XXYLT1Q8NBI6 393 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 SNX25Q9H3E2 840 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 UBIAD1Q9Y5Z9 338 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 CTCFP49711 727 aaPredicted RBP10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 EXOC3L4Q17RC7 722 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 METTL16Q86W50 562 aaKnown RBP10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 SH3TC2Q8TF17 1288 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 ATP8B4Q8TF62 1192 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 PPP1R12CQ9BZL4 782 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 TMEM39AQ9NV64 488 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 TNS1Q9HBL0 1735 aaKnown RBP10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 GPC3P51654 580 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 GRB10Q13322 594 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 KIZQ2M2Z5 673 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 CST9Q5W186 159 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 NFRKBQ6P4R8 1299 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 RRAGAQ7L523 313 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 ZNF354CQ86Y25 554 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 JAKMIP2Q96AA8 810 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 NT5C1BQ96P26 610 aa10.31□□□□□ -0.76
GAPVD1-219ENST00000495955 IGF2BP3O00425 579 aaKnown RBP eCLIP10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 CTNNA2P26232 953 aa10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 PRCPP42785 496 aa10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 BFSP1Q12934 665 aa10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 PTPAQ15257 358 aa10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 PTGISQ16647 500 aa10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 IFI16Q16666 785 aaKnown RBP10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 REPS2Q8NFH8 660 aa10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 CLEC4DQ8WXI8 215 aa10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 KIAA1586Q9HCI6 787 aa10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 GPRC5CQ9NQ84 441 aa10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 CCDC88AQ3V6T2 1871 aa10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 TRIM49BA6NDI0 452 aa10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 INHAP05111 366 aa10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 SNX16P57768 344 aa10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 CCDC112Q8NEF3 446 aa10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 PRPF31Q8WWY3 499 aaKnown RBP10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 RUSC1Q9BVN2 902 aa10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 ST7Q9NRC1 585 aa10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 AGO2Q9UKV8 859 aaKnown RBP10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 ZBTB22O15209 634 aa10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 CYP11B2P19099 503 aa10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 NAALADL2Q58DX5 795 aa10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 C4orf19Q8IY42 314 aa10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 ABRAQ8N0Z2 381 aa10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 TRAPPC12Q8WVT3 735 aa10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 CTNNBL1Q8WYA6 563 aaPredicted RBP10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 RNF34Q969K3 372 aa10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 KIFC3Q9BVG8 833 aa10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 COL2A1P02458 1487 aaPredicted RBP10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 GAS2O43903 313 aaKnown RBP10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 ABL1P00519 1130 aa10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 ACTN1P12814 892 aa10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 CIITAP33076 1130 aa10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 MXI1P50539 228 aa10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 PRMT2P55345 433 aa10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 POLR2FP61218 127 aaKnown RBP10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 PPP2R5CQ13362 524 aa10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 SFMBT2Q5VUG0 894 aa10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 DEFB128Q7Z7B8 93 aa10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 KCTD17Q8N5Z5 321 aa10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 SYT2Q8N9I0 419 aaPredicted RBP10.3□□□□□ -0.76
GAPVD1-219ENST00000495955 TYW1Q9NV66 732 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms