RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 EXOC4Q96A65 974 aa16.15■□□□□ 0.18
CHTOP-206ENST00000495554 SIX2Q9NPC8 291 aa16.15■□□□□ 0.18
CHTOP-206ENST00000495554 ZNF112Q9UJU3 913 aa16.15■□□□□ 0.18
CHTOP-206ENST00000495554 PPP1R9AQ9ULJ8 1098 aa16.15■□□□□ 0.18
CHTOP-206ENST00000495554 FZD1Q9UP38 647 aa16.15■□□□□ 0.18
CHTOP-206ENST00000495554 MYH10P35580 1976 aa16.15■□□□□ 0.18
CHTOP-206ENST00000495554 DHX15O43143 795 aaKnown RBP16.14■□□□□ 0.17
CHTOP-206ENST00000495554 FLOT1O75955 427 aa16.14■□□□□ 0.17
CHTOP-206ENST00000495554 TNNT3P45378 269 aaPredicted RBP16.14■□□□□ 0.17
CHTOP-206ENST00000495554 JAM2P57087 298 aa16.14■□□□□ 0.17
CHTOP-206ENST00000495554 MRPS9P82933 396 aaKnown RBP16.14■□□□□ 0.17
CHTOP-206ENST00000495554 SPP2Q13103 211 aa16.14■□□□□ 0.17
CHTOP-206ENST00000495554 RBM46Q8TBY0 533 aaKnown RBP16.14■□□□□ 0.17
CHTOP-206ENST00000495554 FAM71BQ8TC56 605 aa16.14■□□□□ 0.17
CHTOP-206ENST00000495554 SYTL5Q8TDW5 730 aaPredicted RBP16.14■□□□□ 0.17
CHTOP-206ENST00000495554 LRRC1Q9BTT6 524 aa16.14■□□□□ 0.17
CHTOP-206ENST00000495554 PACSIN1Q9BY11 444 aa16.14■□□□□ 0.17
CHTOP-206ENST00000495554 KCNH7Q9NS40 1196 aa16.14■□□□□ 0.17
CHTOP-206ENST00000495554 ARHGEF35A5YM69 484 aa16.14■□□□□ 0.17
CHTOP-206ENST00000495554 MEI1Q5TIA1 1274 aa16.14■□□□□ 0.17
CHTOP-206ENST00000495554 MCF2L2Q86YR7 1114 aa16.14■□□□□ 0.17
CHTOP-206ENST00000495554 GOLGA5Q8TBA6 731 aa16.14■□□□□ 0.17
CHTOP-206ENST00000495554 ZKSCAN4Q969J2 545 aaPredicted RBP16.14■□□□□ 0.17
CHTOP-206ENST00000495554 N4BP1O75113 896 aaKnown RBP16.13■□□□□ 0.17
CHTOP-206ENST00000495554 AARSP49588 968 aaKnown RBP eCLIP16.13■□□□□ 0.17
CHTOP-206ENST00000495554 NIPA1Q7RTP0 329 aa16.13■□□□□ 0.17
CHTOP-206ENST00000495554 VPS36Q86VN1 386 aa16.13■□□□□ 0.17
CHTOP-206ENST00000495554 BANK1Q8NDB2 785 aa16.13■□□□□ 0.17
CHTOP-206ENST00000495554 WNK4Q96J92 1243 aa16.13■□□□□ 0.17
CHTOP-206ENST00000495554 TAAR1Q96RJ0 339 aa16.13■□□□□ 0.17
CHTOP-206ENST00000495554 RPAP3Q9H6T3 665 aaPredicted RBP16.13■□□□□ 0.17
CHTOP-206ENST00000495554 AGPAT3Q9NRZ7 376 aa16.13■□□□□ 0.17
CHTOP-206ENST00000495554 HOMER2Q9NSB8 354 aa16.13■□□□□ 0.17
CHTOP-206ENST00000495554 PSD3Q9NYI0 1048 aa16.13■□□□□ 0.17
CHTOP-206ENST00000495554 VPS18Q9P253 973 aa16.13■□□□□ 0.17
CHTOP-206ENST00000495554 NAGPAQ9UK23 515 aa16.13■□□□□ 0.17
CHTOP-206ENST00000495554 FRMD4BQ9Y2L6 1034 aa16.13■□□□□ 0.17
CHTOP-206ENST00000495554 UBIAD1Q9Y5Z9 338 aa16.13■□□□□ 0.17
CHTOP-206ENST00000495554 MYBL2P10244 700 aa16.13■□□□□ 0.17
CHTOP-206ENST00000495554 MATR3P43243 847 aaKnown RBP eCLIP16.13■□□□□ 0.17
CHTOP-206ENST00000495554 IFI16Q16666 785 aaKnown RBP16.13■□□□□ 0.17
CHTOP-206ENST00000495554 GLE1Q53GS7 698 aaKnown RBP16.13■□□□□ 0.17
CHTOP-206ENST00000495554 NLGN2Q8NFZ4 835 aa16.13■□□□□ 0.17
CHTOP-206ENST00000495554 DMAC2Q9NW81 257 aa16.13■□□□□ 0.17
CHTOP-206ENST00000495554 HPCAL4Q9UM19 191 aa16.13■□□□□ 0.17
CHTOP-206ENST00000495554 ATP8B3O60423 1300 aa16.12■□□□□ 0.17
CHTOP-206ENST00000495554 CCDC66A2RUB6 948 aa16.12■□□□□ 0.17
CHTOP-206ENST00000495554 FTCDO95954 541 aa16.12■□□□□ 0.17
CHTOP-206ENST00000495554 BACE1P56817 501 aa16.12■□□□□ 0.17
CHTOP-206ENST00000495554 RPS6P62753 249 aaKnown RBP16.12■□□□□ 0.17
CHTOP-206ENST00000495554 ALKBH5Q6P6C2 394 aaKnown RBP16.12■□□□□ 0.17
CHTOP-206ENST00000495554 ZBTB9Q96C00 473 aa16.12■□□□□ 0.17
CHTOP-206ENST00000495554 SELENOOQ9BVL4 669 aa16.12■□□□□ 0.17
CHTOP-206ENST00000495554 IKZF4Q9H2S9 585 aa16.12■□□□□ 0.17
CHTOP-206ENST00000495554 DMGDHQ9UI17 866 aaKnown RBP16.12■□□□□ 0.17
CHTOP-206ENST00000495554 P4HBP07237 508 aaKnown RBP16.12■□□□□ 0.17
CHTOP-206ENST00000495554 FERP16591 822 aa16.12■□□□□ 0.17
CHTOP-206ENST00000495554 GYS2P54840 703 aa16.12■□□□□ 0.17
CHTOP-206ENST00000495554 ITGB3BPQ13352 177 aaPredicted RBP16.12■□□□□ 0.17
CHTOP-206ENST00000495554 COG2Q14746 738 aa16.12■□□□□ 0.17
CHTOP-206ENST00000495554 PPP2R5AQ15172 486 aa16.12■□□□□ 0.17
CHTOP-206ENST00000495554 TKFCQ3LXA3 575 aa16.12■□□□□ 0.17
CHTOP-206ENST00000495554 ANGEL2Q5VTE6 544 aaKnown RBP16.12■□□□□ 0.17
CHTOP-206ENST00000495554 PCNX4Q63HM2 1172 aa16.12■□□□□ 0.17
CHTOP-206ENST00000495554 MIER3Q7Z3K6 550 aa16.12■□□□□ 0.17
CHTOP-206ENST00000495554 KSR1Q8IVT5 923 aa16.12■□□□□ 0.17
CHTOP-206ENST00000495554 SCYL3Q8IZE3 742 aa16.12■□□□□ 0.17
CHTOP-206ENST00000495554 AENQ8WTP8 325 aaKnown RBP16.12■□□□□ 0.17
CHTOP-206ENST00000495554 HDAC7Q8WUI4 952 aa16.12■□□□□ 0.17
CHTOP-206ENST00000495554 STRA6Q9BX79 667 aa16.12■□□□□ 0.17
CHTOP-206ENST00000495554 SMARCAL1Q9NZC9 954 aa16.12■□□□□ 0.17
CHTOP-206ENST00000495554 EHD2Q9NZN4 543 aa16.12■□□□□ 0.17
CHTOP-206ENST00000495554 STIM2Q9P246 746 aa16.12■□□□□ 0.17
CHTOP-206ENST00000495554 GRID2IPA4D2P6 1211 aa16.11■□□□□ 0.17
CHTOP-206ENST00000495554 ERICH4A6NGS2 130 aa16.11■□□□□ 0.17
CHTOP-206ENST00000495554 DDX39AO00148 427 aaKnown RBP16.11■□□□□ 0.17
CHTOP-206ENST00000495554 VWA5AO00534 786 aa16.11■□□□□ 0.17
CHTOP-206ENST00000495554 HIP1RO75146 1068 aa16.11■□□□□ 0.17
CHTOP-206ENST00000495554 PTPRAP18433 802 aa16.11■□□□□ 0.17
CHTOP-206ENST00000495554 FMO5P49326 533 aa16.11■□□□□ 0.17
CHTOP-206ENST00000495554 PADI6Q6TGC4 694 aa16.11■□□□□ 0.17
CHTOP-206ENST00000495554 SLC9A9Q8IVB4 645 aa16.11■□□□□ 0.17
CHTOP-206ENST00000495554 TRPM4Q8TD43 1214 aa16.11■□□□□ 0.17
CHTOP-206ENST00000495554 RBM12Q9NTZ6 932 aaKnown RBP16.11■□□□□ 0.17
CHTOP-206ENST00000495554 MAP3K20Q9NYL2 800 aaKnown RBP16.11■□□□□ 0.17
CHTOP-206ENST00000495554 PKD2L1Q9P0L9 805 aa16.11■□□□□ 0.17
CHTOP-206ENST00000495554 RIPK3Q9Y572 518 aa16.11■□□□□ 0.17
CHTOP-206ENST00000495554 PPP1R37O75864 691 aa16.11■□□□□ 0.17
CHTOP-206ENST00000495554 STAT1P42224 750 aa16.11■□□□□ 0.17
CHTOP-206ENST00000495554 MAPK7Q13164 816 aa16.11■□□□□ 0.17
CHTOP-206ENST00000495554 MYBPC2Q14324 1141 aa16.11■□□□□ 0.17
CHTOP-206ENST00000495554 C8orf74Q6P047 294 aa16.11■□□□□ 0.17
CHTOP-206ENST00000495554 ATG4CQ96DT6 458 aa16.11■□□□□ 0.17
CHTOP-206ENST00000495554 MS4A14Q96JA4 679 aa16.11■□□□□ 0.17
CHTOP-206ENST00000495554 AGO4Q9HCK5 861 aaKnown RBP16.11■□□□□ 0.17
CHTOP-206ENST00000495554 AJAP1Q9UKB5 411 aaPredicted RBP16.11■□□□□ 0.17
CHTOP-206ENST00000495554 FAN1Q9Y2M0 1017 aa16.11■□□□□ 0.17
CHTOP-206ENST00000495554 TTC36A6NLP5 189 aa16.1■□□□□ 0.17
CHTOP-206ENST00000495554 GFPT2O94808 682 aa16.1■□□□□ 0.17
CHTOP-206ENST00000495554 CYP2J2P51589 502 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms