RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 DARSP14868 501 aaKnown RBP13.4□□□□□ -0.26
CCHCR1-215ENST00000488920 ZSCAN20P17040 1043 aaPredicted RBP13.4□□□□□ -0.26
CCHCR1-215ENST00000488920 QARSP47897 775 aaKnown RBP13.4□□□□□ -0.26
CCHCR1-215ENST00000488920 DNM2P50570 870 aa13.4□□□□□ -0.26
CCHCR1-215ENST00000488920 CAMK1Q14012 370 aa13.4□□□□□ -0.26
CCHCR1-215ENST00000488920 PLA2G4FQ68DD2 849 aa13.4□□□□□ -0.26
CCHCR1-215ENST00000488920 POTEDQ86YR6 584 aa13.4□□□□□ -0.26
CCHCR1-215ENST00000488920 SPPL3Q8TCT6 385 aa13.4□□□□□ -0.26
CCHCR1-215ENST00000488920 TNFRSF25Q93038 417 aa13.4□□□□□ -0.26
CCHCR1-215ENST00000488920 P2RX5Q93086 422 aa13.4□□□□□ -0.26
CCHCR1-215ENST00000488920 PABPC5Q96DU9 382 aaKnown RBP13.4□□□□□ -0.26
CCHCR1-215ENST00000488920 NAP1L4Q99733 375 aaKnown RBP13.4□□□□□ -0.26
CCHCR1-215ENST00000488920 IGFLR1Q9H665 355 aa13.4□□□□□ -0.26
CCHCR1-215ENST00000488920 TYW1Q9NV66 732 aaKnown RBP13.4□□□□□ -0.26
CCHCR1-215ENST00000488920 TMEM161AQ9NX61 479 aa13.4□□□□□ -0.26
CCHCR1-215ENST00000488920 CLDND1Q9NY35 253 aa13.4□□□□□ -0.26
CCHCR1-215ENST00000488920 SUCLA2Q9P2R7 463 aaPredicted RBP13.4□□□□□ -0.26
CCHCR1-215ENST00000488920 HCSTQ9UBK5 93 aa13.4□□□□□ -0.26
CCHCR1-215ENST00000488920 IGKV6-21A0A0C4DH24 114 aa13.39□□□□□ -0.27
CCHCR1-215ENST00000488920 BTBD18B2RXH4 712 aa13.39□□□□□ -0.27
CCHCR1-215ENST00000488920 TBX3O15119 743 aa13.39□□□□□ -0.27
CCHCR1-215ENST00000488920 MAFO75444 373 aaPredicted RBP13.39□□□□□ -0.27
CCHCR1-215ENST00000488920 MMP1P03956 469 aa13.39□□□□□ -0.27
CCHCR1-215ENST00000488920 P4HBP07237 508 aaKnown RBP13.39□□□□□ -0.27
CCHCR1-215ENST00000488920 GTF2F1P35269 517 aaKnown RBP eCLIP13.39□□□□□ -0.27
CCHCR1-215ENST00000488920 NPEPPSP55786 919 aa13.39□□□□□ -0.27
CCHCR1-215ENST00000488920 HYAL1Q12794 435 aa13.39□□□□□ -0.27
CCHCR1-215ENST00000488920 NAALADL2Q58DX5 795 aa13.39□□□□□ -0.27
CCHCR1-215ENST00000488920 NCAPH2Q6IBW4 605 aa13.39□□□□□ -0.27
CCHCR1-215ENST00000488920 PTCRAQ6ISU1 281 aaPredicted RBP13.39□□□□□ -0.27
CCHCR1-215ENST00000488920 KSR1Q8IVT5 923 aa13.39□□□□□ -0.27
CCHCR1-215ENST00000488920 ZNF579Q8NAF0 562 aaKnown RBP13.39□□□□□ -0.27
CCHCR1-215ENST00000488920 RNF169Q8NCN4 708 aa13.39□□□□□ -0.27
CCHCR1-215ENST00000488920 NEK9Q8TD19 979 aa13.39□□□□□ -0.27
CCHCR1-215ENST00000488920 GCOM2Q9BZD3 368 aaPredicted RBP13.39□□□□□ -0.27
CCHCR1-215ENST00000488920 ELAC1Q9H777 363 aaKnown RBP13.39□□□□□ -0.27
CCHCR1-215ENST00000488920 BRMS1Q9HCU9 246 aa13.39□□□□□ -0.27
CCHCR1-215ENST00000488920 RGL1Q9NZL6 768 aa13.39□□□□□ -0.27
CCHCR1-215ENST00000488920 WRAP73Q9P2S5 460 aaPredicted RBP13.39□□□□□ -0.27
CCHCR1-215ENST00000488920 TCF20Q9UGU0 1960 aaKnown RBP13.38□□□□□ -0.27
CCHCR1-215ENST00000488920 A0A087WZ62 844 aa13.38□□□□□ -0.27
CCHCR1-215ENST00000488920 GRXCR2A6NFK2 248 aa13.38□□□□□ -0.27
CCHCR1-215ENST00000488920 BAG4O95429 457 aaKnown RBP13.38□□□□□ -0.27
CCHCR1-215ENST00000488920 IRS1P35568 1242 aa13.38□□□□□ -0.27
CCHCR1-215ENST00000488920 CDC42EP1Q00587 391 aa13.38□□□□□ -0.27
CCHCR1-215ENST00000488920 ST3GAL1Q11201 340 aa13.38□□□□□ -0.27
CCHCR1-215ENST00000488920 TRIM29Q14134 588 aa13.38□□□□□ -0.27
CCHCR1-215ENST00000488920 COL19A1Q14993 1142 aa13.38□□□□□ -0.27
CCHCR1-215ENST00000488920 EPHA7Q15375 998 aa13.38□□□□□ -0.27
CCHCR1-215ENST00000488920 ECHDC2Q86YB7 292 aa13.38□□□□□ -0.27
CCHCR1-215ENST00000488920 RHPN2Q8IUC4 686 aa13.38□□□□□ -0.27
CCHCR1-215ENST00000488920 POF1BQ8WVV4 589 aa13.38□□□□□ -0.27
CCHCR1-215ENST00000488920 CEP170P1Q96L14 293 aa13.38□□□□□ -0.27
CCHCR1-215ENST00000488920 FDXACB1Q9BRP7 624 aaPredicted RBP13.38□□□□□ -0.27
CCHCR1-215ENST00000488920 CD320Q9NPF0 282 aa13.38□□□□□ -0.27
CCHCR1-215ENST00000488920 CYP26B1Q9NR63 512 aa13.38□□□□□ -0.27
CCHCR1-215ENST00000488920 AAASQ9NRG9 546 aa13.38□□□□□ -0.27
CCHCR1-215ENST00000488920 RNF19AQ9NV58 838 aa13.38□□□□□ -0.27
CCHCR1-215ENST00000488920 LIMCH1Q9UPQ0 1083 aa13.38□□□□□ -0.27
CCHCR1-215ENST00000488920 PCDHB12Q9Y5F1 795 aa13.38□□□□□ -0.27
CCHCR1-215ENST00000488920 ZBTB39O15060 712 aa13.37□□□□□ -0.27
CCHCR1-215ENST00000488920 LINC01565O15544 149 aa13.37□□□□□ -0.27
CCHCR1-215ENST00000488920 NCK2O43639 380 aa13.37□□□□□ -0.27
CCHCR1-215ENST00000488920 DKC1O60832 514 aaKnown RBP eCLIP13.37□□□□□ -0.27
CCHCR1-215ENST00000488920 IL9P15248 144 aa13.37□□□□□ -0.27
CCHCR1-215ENST00000488920 LTBRP36941 435 aa13.37□□□□□ -0.27
CCHCR1-215ENST00000488920 DLX2Q07687 328 aaPredicted RBP13.37□□□□□ -0.27
CCHCR1-215ENST00000488920 CTTNQ14247 550 aaKnown RBP13.37□□□□□ -0.27
CCHCR1-215ENST00000488920 CTC1Q2NKJ3 1217 aa13.37□□□□□ -0.27
CCHCR1-215ENST00000488920 LRRC55Q6ZSA7 311 aa13.37□□□□□ -0.27
CCHCR1-215ENST00000488920 ADGRD2Q7Z7M1 963 aa13.37□□□□□ -0.27
CCHCR1-215ENST00000488920 DIS3L2Q8IYB7 885 aaKnown RBP13.37□□□□□ -0.27
CCHCR1-215ENST00000488920 SLFN12Q8IYM2 578 aa13.37□□□□□ -0.27
CCHCR1-215ENST00000488920 MICAL1Q8TDZ2 1067 aa13.37□□□□□ -0.27
CCHCR1-215ENST00000488920 TMEM143Q96AN5 459 aa13.37□□□□□ -0.27
CCHCR1-215ENST00000488920 DYDC2Q96IM9 177 aa13.37□□□□□ -0.27
CCHCR1-215ENST00000488920 NLRP4Q96MN2 994 aa13.37□□□□□ -0.27
CCHCR1-215ENST00000488920 CASD1Q96PB1 797 aa13.37□□□□□ -0.27
CCHCR1-215ENST00000488920 TMEM117Q9H0C3 514 aa13.37□□□□□ -0.27
CCHCR1-215ENST00000488920 CWH43Q9H720 699 aa13.37□□□□□ -0.27
CCHCR1-215ENST00000488920 PCDHGC5Q9Y5F6 944 aa13.37□□□□□ -0.27
CCHCR1-215ENST00000488920 EVPLQ92817 2033 aa13.37□□□□□ -0.27
CCHCR1-215ENST00000488920 A0A0U1RQF3 1178 aa13.36□□□□□ -0.27
CCHCR1-215ENST00000488920 WNT7AO00755 349 aa13.36□□□□□ -0.27
CCHCR1-215ENST00000488920 FGF18O76093 207 aa13.36□□□□□ -0.27
CCHCR1-215ENST00000488920 YWHABP31946 246 aaKnown RBP13.36□□□□□ -0.27
CCHCR1-215ENST00000488920 GUCY1B3Q02153 619 aa13.36□□□□□ -0.27
CCHCR1-215ENST00000488920 CYP4A11Q02928 519 aa13.36□□□□□ -0.27
CCHCR1-215ENST00000488920 SPIRE1Q08AE8 756 aa13.36□□□□□ -0.27
CCHCR1-215ENST00000488920 CLUL1Q15846 466 aa13.36□□□□□ -0.27
CCHCR1-215ENST00000488920 CALCRLQ16602 461 aa13.36□□□□□ -0.27
CCHCR1-215ENST00000488920 PUS10Q3MIT2 529 aaKnown RBP13.36□□□□□ -0.27
CCHCR1-215ENST00000488920 RBM23Q86U06 439 aaKnown RBP13.36□□□□□ -0.27
CCHCR1-215ENST00000488920 CCDC83Q8IWF9 413 aa13.36□□□□□ -0.27
CCHCR1-215ENST00000488920 TPH2Q8IWU9 490 aa13.36□□□□□ -0.27
CCHCR1-215ENST00000488920 FAM178BQ8IXR5 827 aa13.36□□□□□ -0.27
CCHCR1-215ENST00000488920 C4orf19Q8IY42 314 aa13.36□□□□□ -0.27
CCHCR1-215ENST00000488920 THNSL1Q8IYQ7 743 aa13.36□□□□□ -0.27
CCHCR1-215ENST00000488920 ABI1Q8IZP0 508 aa13.36□□□□□ -0.27
CCHCR1-215ENST00000488920 COLGALT1Q8NBJ5 622 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms