RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 ZNF484Q5JVG2 852 aa8.72□□□□□ -1.01
PDPN-205ENST00000487038 TMC5Q6UXY8 1006 aa8.72□□□□□ -1.01
PDPN-205ENST00000487038 C15orf39Q6ZRI6 1047 aa8.72□□□□□ -1.01
PDPN-205ENST00000487038 LRRC55Q6ZSA7 311 aa8.72□□□□□ -1.01
PDPN-205ENST00000487038 CYB5R4Q7L1T6 521 aa8.72□□□□□ -1.01
PDPN-205ENST00000487038 GPR149Q86SP6 731 aa8.72□□□□□ -1.01
PDPN-205ENST00000487038 VPS52Q8N1B4 723 aa8.72□□□□□ -1.01
PDPN-205ENST00000487038 ZNF710Q8N1W2 664 aa8.72□□□□□ -1.01
PDPN-205ENST00000487038 GPR161Q8N6U8 529 aaKnown RBP8.72□□□□□ -1.01
PDPN-205ENST00000487038 C12orf76Q8N812 135 aaPredicted RBP8.72□□□□□ -1.01
PDPN-205ENST00000487038 RIN2Q8WYP3 895 aaPredicted RBP8.72□□□□□ -1.01
PDPN-205ENST00000487038 STAMQ92783 540 aa8.72□□□□□ -1.01
PDPN-205ENST00000487038 SECISBP2LQ93073 1101 aaKnown RBP8.72□□□□□ -1.01
PDPN-205ENST00000487038 MAP3K14Q99558 947 aa8.72□□□□□ -1.01
PDPN-205ENST00000487038 LZTS2Q9BRK4 669 aa8.72□□□□□ -1.01
PDPN-205ENST00000487038 EMILIN2Q9BXX0 1053 aa8.72□□□□□ -1.01
PDPN-205ENST00000487038 ZBP1Q9H171 429 aa8.72□□□□□ -1.01
PDPN-205ENST00000487038 PSTPIP2Q9H939 334 aa8.72□□□□□ -1.01
PDPN-205ENST00000487038 KCNK12Q9HB15 430 aa8.72□□□□□ -1.01
PDPN-205ENST00000487038 KCNH7Q9NS40 1196 aa8.72□□□□□ -1.01
PDPN-205ENST00000487038 CEP131Q9UPN4 1083 aa8.72□□□□□ -1.01
PDPN-205ENST00000487038 TDRD15B5MCY1 1934 aaKnown RBP8.72□□□□□ -1.01
PDPN-205ENST00000487038 DDAH1O94760 285 aa8.71□□□□□ -1.02
PDPN-205ENST00000487038 CFHP08603 1231 aa8.71□□□□□ -1.02
PDPN-205ENST00000487038 CTSAP10619 480 aa8.71□□□□□ -1.02
PDPN-205ENST00000487038 EPCAMP16422 314 aa8.71□□□□□ -1.02
PDPN-205ENST00000487038 SMARCA1P28370 1054 aa8.71□□□□□ -1.02
PDPN-205ENST00000487038 BCAR1P56945 870 aa8.71□□□□□ -1.02
PDPN-205ENST00000487038 DSC3Q14574 896 aa8.71□□□□□ -1.02
PDPN-205ENST00000487038 RSPO4Q2I0M5 234 aaPredicted RBP8.71□□□□□ -1.02
PDPN-205ENST00000487038 ECHDC2Q86YB7 292 aa8.71□□□□□ -1.02
PDPN-205ENST00000487038 CKAP2LQ8IYA6 745 aa8.71□□□□□ -1.02
PDPN-205ENST00000487038 KIAA0319LQ8IZA0 1049 aa8.71□□□□□ -1.02
PDPN-205ENST00000487038 METTL13Q8N6R0 699 aa8.71□□□□□ -1.02
PDPN-205ENST00000487038 RNF169Q8NCN4 708 aa8.71□□□□□ -1.02
PDPN-205ENST00000487038 NCOA7Q8NI08 942 aa8.71□□□□□ -1.02
PDPN-205ENST00000487038 NXPE3Q969Y0 559 aa8.71□□□□□ -1.02
PDPN-205ENST00000487038 MAP7D2Q96T17 732 aa8.71□□□□□ -1.02
PDPN-205ENST00000487038 PPP1R16BQ96T49 567 aa8.71□□□□□ -1.02
PDPN-205ENST00000487038 MXRA8Q9BRK3 442 aa8.71□□□□□ -1.02
PDPN-205ENST00000487038 ZNF302Q9NR11 478 aa8.71□□□□□ -1.02
PDPN-205ENST00000487038 DACT1Q9NYF0 836 aa8.71□□□□□ -1.02
PDPN-205ENST00000487038 NCDNQ9UBB6 729 aa8.71□□□□□ -1.02
PDPN-205ENST00000487038 DPP7Q9UHL4 492 aa8.71□□□□□ -1.02
PDPN-205ENST00000487038 TCEAL9Q9UHQ7 104 aa8.71□□□□□ -1.02
PDPN-205ENST00000487038 PCDHA6Q9UN73 950 aa8.71□□□□□ -1.02
PDPN-205ENST00000487038 PCDHA8Q9Y5H6 950 aa8.71□□□□□ -1.02
PDPN-205ENST00000487038 CNOT1A5YKK6 2376 aaKnown RBP8.7□□□□□ -1.02
PDPN-205ENST00000487038 SPTLC1O15269 473 aa8.7□□□□□ -1.02
PDPN-205ENST00000487038 ZC3H11AO75152 810 aaKnown RBP eCLIP8.7□□□□□ -1.02
PDPN-205ENST00000487038 VTNP04004 478 aa8.7□□□□□ -1.02
PDPN-205ENST00000487038 SP9P0CG40 484 aa8.7□□□□□ -1.02
PDPN-205ENST00000487038 SRFP11831 508 aa8.7□□□□□ -1.02
PDPN-205ENST00000487038 TMOD1P28289 359 aa8.7□□□□□ -1.02
PDPN-205ENST00000487038 GBP2P32456 591 aaPredicted RBP8.7□□□□□ -1.02
PDPN-205ENST00000487038 GNAQP50148 359 aa8.7□□□□□ -1.02
PDPN-205ENST00000487038 UBE2SQ16763 222 aa8.7□□□□□ -1.02
PDPN-205ENST00000487038 ST3GAL2Q16842 350 aa8.7□□□□□ -1.02
PDPN-205ENST00000487038 CLLU1OSQ5K130 101 aa8.7□□□□□ -1.02
PDPN-205ENST00000487038 SPECC1Q5M775 1068 aa8.7□□□□□ -1.02
PDPN-205ENST00000487038 KIAA0319Q5VV43 1072 aa8.7□□□□□ -1.02
PDPN-205ENST00000487038 MIS18BP1Q6P0N0 1132 aa8.7□□□□□ -1.02
PDPN-205ENST00000487038 C1orf210Q8IVY1 113 aa8.7□□□□□ -1.02
PDPN-205ENST00000487038 HELQQ8TDG4 1101 aa8.7□□□□□ -1.02
PDPN-205ENST00000487038 BBXQ8WY36 941 aaPredicted RBP8.7□□□□□ -1.02
PDPN-205ENST00000487038 SCLT1Q96NL6 688 aa8.7□□□□□ -1.02
PDPN-205ENST00000487038 TBC1D17Q9HA65 648 aa8.7□□□□□ -1.02
PDPN-205ENST00000487038 CDHR5Q9HBB8 845 aa8.7□□□□□ -1.02
PDPN-205ENST00000487038 RNF19AQ9NV58 838 aa8.7□□□□□ -1.02
PDPN-205ENST00000487038 CDV3Q9UKY7 258 aaKnown RBP8.7□□□□□ -1.02
PDPN-205ENST00000487038 CA14Q9ULX7 337 aa8.7□□□□□ -1.02
PDPN-205ENST00000487038 AKT3Q9Y243 479 aa8.7□□□□□ -1.02
PDPN-205ENST00000487038 SIT1Q9Y3P8 196 aa8.7□□□□□ -1.02
PDPN-205ENST00000487038 U3KPZ7 1027 aaPredicted RBP8.7□□□□□ -1.02
PDPN-205ENST00000487038 DOCK8Q8NF50 2099 aa8.69□□□□□ -1.02
PDPN-205ENST00000487038 IGKV6D-21A0A0A0MT36 114 aa8.69□□□□□ -1.02
PDPN-205ENST00000487038 A0A0U1RQF3 1178 aa8.69□□□□□ -1.02
PDPN-205ENST00000487038 PRR5-ARHGAP8B1AHC4 643 aa8.69□□□□□ -1.02
PDPN-205ENST00000487038 NT5C1B-RDH14C9J2C7 533 aa8.69□□□□□ -1.02
PDPN-205ENST00000487038 DDX39AO00148 427 aaKnown RBP8.69□□□□□ -1.02
PDPN-205ENST00000487038 MAGEB2O15479 319 aa8.69□□□□□ -1.02
PDPN-205ENST00000487038 NARSO43776 548 aaKnown RBP8.69□□□□□ -1.02
PDPN-205ENST00000487038 ATG7O95352 703 aa8.69□□□□□ -1.02
PDPN-205ENST00000487038 C22orf31O95567 290 aa8.69□□□□□ -1.02
PDPN-205ENST00000487038 SKIP12755 728 aa8.69□□□□□ -1.02
PDPN-205ENST00000487038 KLRC2P26717 231 aa8.69□□□□□ -1.02
PDPN-205ENST00000487038 ARHGAP8P85298 464 aa8.69□□□□□ -1.02
PDPN-205ENST00000487038 LMNB2Q03252 620 aa8.69□□□□□ -1.02
PDPN-205ENST00000487038 PHLDB3Q6NSJ2 640 aa8.69□□□□□ -1.02
PDPN-205ENST00000487038 PDXDC2PQ6P474 469 aa8.69□□□□□ -1.02
PDPN-205ENST00000487038 CYP26C1Q6V0L0 522 aa8.69□□□□□ -1.02
PDPN-205ENST00000487038 DDX53Q86TM3 631 aaKnown RBP8.69□□□□□ -1.02
PDPN-205ENST00000487038 CCDC60Q8IWA6 550 aaPredicted RBP8.69□□□□□ -1.02
PDPN-205ENST00000487038 TEX2Q8IWB9 1127 aa8.69□□□□□ -1.02
PDPN-205ENST00000487038 ZNF654Q8IZM8 581 aa8.69□□□□□ -1.02
PDPN-205ENST00000487038 SLC22A17Q8WUG5 538 aa8.69□□□□□ -1.02
PDPN-205ENST00000487038 AUTS2Q8WXX7 1259 aa8.69□□□□□ -1.02
PDPN-205ENST00000487038 LNPKQ9C0E8 428 aa8.69□□□□□ -1.02
PDPN-205ENST00000487038 AGO4Q9HCK5 861 aaKnown RBP8.69□□□□□ -1.02
PDPN-205ENST00000487038 ARHGEF3Q9NR81 526 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms