RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-208ENST00000475912 BOCQ9BWV1 1114 aa6.88□□□□□ -1.31
PRKD3-208ENST00000475912 BTBD2Q9BX70 525 aa6.88□□□□□ -1.31
PRKD3-208ENST00000475912 VWDEQ8N2E2 1590 aa6.87□□□□□ -1.31
PRKD3-208ENST00000475912 KCNQ1P51787 676 aa6.87□□□□□ -1.31
PRKD3-208ENST00000475912 CD83Q01151 205 aa6.87□□□□□ -1.31
PRKD3-208ENST00000475912 PABPC4Q13310 644 aaKnown RBP eCLIP6.87□□□□□ -1.31
PRKD3-208ENST00000475912 PIK3R6Q5UE93 754 aa6.87□□□□□ -1.31
PRKD3-208ENST00000475912 CXXC5Q7LFL8 322 aaKnown RBP6.87□□□□□ -1.31
PRKD3-208ENST00000475912 CIR1Q86X95 450 aaPredicted RBP6.87□□□□□ -1.31
PRKD3-208ENST00000475912 TTC9BQ8N6N2 239 aa6.87□□□□□ -1.31
PRKD3-208ENST00000475912 CHST14Q8NCH0 376 aa6.87□□□□□ -1.31
PRKD3-208ENST00000475912 CHST13Q8NET6 341 aa6.87□□□□□ -1.31
PRKD3-208ENST00000475912 WDR48Q8TAF3 677 aa6.87□□□□□ -1.31
PRKD3-208ENST00000475912 KRTAP3-1Q9BYR8 98 aa6.87□□□□□ -1.31
PRKD3-208ENST00000475912 ASB1Q9Y576 335 aa6.87□□□□□ -1.31
PRKD3-208ENST00000475912 TRAF5O00463 557 aa6.86□□□□□ -1.31
PRKD3-208ENST00000475912 ETV4P43268 484 aa6.86□□□□□ -1.31
PRKD3-208ENST00000475912 ICAM4Q14773 271 aa6.86□□□□□ -1.31
PRKD3-208ENST00000475912 KANK2Q63ZY3 851 aa6.86□□□□□ -1.31
PRKD3-208ENST00000475912 OTOP2Q7RTS6 562 aa6.86□□□□□ -1.31
PRKD3-208ENST00000475912 LRRC37BQ96QE4 947 aa6.86□□□□□ -1.31
PRKD3-208ENST00000475912 ZDHHC5Q9C0B5 715 aa6.86□□□□□ -1.31
PRKD3-208ENST00000475912 OR10A5Q9H207 317 aa6.86□□□□□ -1.31
PRKD3-208ENST00000475912 CDC42EP3Q9UKI2 254 aa6.86□□□□□ -1.31
PRKD3-208ENST00000475912 CD2APQ9Y5K6 639 aa6.86□□□□□ -1.31
PRKD3-208ENST00000475912 DNMT1P26358 1616 aaKnown RBP6.86□□□□□ -1.31
PRKD3-208ENST00000475912 ABCC1P33527 1531 aa6.86□□□□□ -1.31
PRKD3-208ENST00000475912 KIDINS220Q9ULH0 1771 aa6.85□□□□□ -1.31
PRKD3-208ENST00000475912 SETD1AO15047 1707 aaKnown RBP6.85□□□□□ -1.31
PRKD3-208ENST00000475912 SUPT6HQ7KZ85 1726 aaKnown RBP6.85□□□□□ -1.31
PRKD3-208ENST00000475912 PTPDC1A2A3K4 754 aa6.85□□□□□ -1.31
PRKD3-208ENST00000475912 GOLGA6L22H0YM25 854 aa6.85□□□□□ -1.31
PRKD3-208ENST00000475912 DVL2O14641 736 aa6.85□□□□□ -1.31
PRKD3-208ENST00000475912 RFPL3O75679 317 aa6.85□□□□□ -1.31
PRKD3-208ENST00000475912 HMGCRP04035 888 aa6.85□□□□□ -1.31
PRKD3-208ENST00000475912 JMJD7P0C870 316 aa6.85□□□□□ -1.31
PRKD3-208ENST00000475912 ZNF20P17024 532 aa6.85□□□□□ -1.31
PRKD3-208ENST00000475912 KIF11P52732 1056 aa6.85□□□□□ -1.31
PRKD3-208ENST00000475912 ARHGAP44Q17R89 818 aa6.85□□□□□ -1.31
PRKD3-208ENST00000475912 C21orf62-AS1Q17RA5 79 aa6.85□□□□□ -1.31
PRKD3-208ENST00000475912 ZNF568Q3ZCX4 644 aa6.85□□□□□ -1.31
PRKD3-208ENST00000475912 CC2D1AQ6P1N0 951 aaPredicted RBP6.85□□□□□ -1.31
PRKD3-208ENST00000475912 GGNQ86UU5 652 aa6.85□□□□□ -1.31
PRKD3-208ENST00000475912 GNRHR2Q96P88 292 aa6.85□□□□□ -1.31
PRKD3-208ENST00000475912 LMF1Q96S06 567 aa6.85□□□□□ -1.31
PRKD3-208ENST00000475912 GPR20Q99678 358 aa6.85□□□□□ -1.31
PRKD3-208ENST00000475912 KIAA1683Q9H0B3 1180 aa6.85□□□□□ -1.31
PRKD3-208ENST00000475912 SEC61A2Q9H9S3 476 aa6.85□□□□□ -1.31
PRKD3-208ENST00000475912 CABP5Q9NP86 173 aa6.85□□□□□ -1.31
PRKD3-208ENST00000475912 FBXO10Q9UK96 956 aa6.85□□□□□ -1.31
PRKD3-208ENST00000475912 A2ML1A8K2U0 1454 aa6.85□□□□□ -1.31
PRKD3-208ENST00000475912 CLTCQ00610 1675 aaKnown RBP6.84□□□□□ -1.31
PRKD3-208ENST00000475912 MOGSQ13724 837 aa6.84□□□□□ -1.31
PRKD3-208ENST00000475912 NOLC1Q14978 699 aaKnown RBP eCLIP6.84□□□□□ -1.31
PRKD3-208ENST00000475912 TCEA2Q15560 299 aa6.84□□□□□ -1.31
PRKD3-208ENST00000475912 RNF151Q2KHN1 245 aa6.84□□□□□ -1.31
PRKD3-208ENST00000475912 DBX2Q6ZNG2 339 aa6.84□□□□□ -1.31
PRKD3-208ENST00000475912 LARP4Q71RC2 724 aaKnown RBP eCLIP6.84□□□□□ -1.31
PRKD3-208ENST00000475912 RTN4RL1Q86UN2 441 aaPredicted RBP6.84□□□□□ -1.31
PRKD3-208ENST00000475912 FOXRED1Q96CU9 486 aaPredicted RBP6.84□□□□□ -1.31
PRKD3-208ENST00000475912 LRRC7Q96NW7 1537 aa6.83□□□□□ -1.32
PRKD3-208ENST00000475912 A0A0G2JNJ9 132 aa6.83□□□□□ -1.32
PRKD3-208ENST00000475912 INSRRP14616 1297 aa6.83□□□□□ -1.32
PRKD3-208ENST00000475912 FLT3P36888 993 aa6.83□□□□□ -1.32
PRKD3-208ENST00000475912 EIF4HQ15056 248 aaKnown RBP6.83□□□□□ -1.32
PRKD3-208ENST00000475912 TKFCQ3LXA3 575 aa6.83□□□□□ -1.32
PRKD3-208ENST00000475912 ZMAT1Q5H9K5 638 aa6.83□□□□□ -1.32
PRKD3-208ENST00000475912 CDCA2Q69YH5 1023 aaPredicted RBP6.83□□□□□ -1.32
PRKD3-208ENST00000475912 TMEM200BQ69YZ2 307 aa6.83□□□□□ -1.32
PRKD3-208ENST00000475912 UBE2R2Q712K3 238 aaPredicted RBP6.83□□□□□ -1.32
PRKD3-208ENST00000475912 HOMER1Q86YM7 354 aa6.83□□□□□ -1.32
PRKD3-208ENST00000475912 DNERQ8NFT8 737 aa6.83□□□□□ -1.32
PRKD3-208ENST00000475912 NEIL1Q96FI4 390 aaPredicted RBP6.83□□□□□ -1.32
PRKD3-208ENST00000475912 SCYL1Q96KG9 808 aa6.83□□□□□ -1.32
PRKD3-208ENST00000475912 CD248Q9HCU0 757 aa6.83□□□□□ -1.32
PRKD3-208ENST00000475912 FANCLQ9NW38 375 aa6.83□□□□□ -1.32
PRKD3-208ENST00000475912 MAGEC2Q9UBF1 373 aaPredicted RBP6.83□□□□□ -1.32
PRKD3-208ENST00000475912 Q9UFV3 132 aa6.83□□□□□ -1.32
PRKD3-208ENST00000475912 ITSN2Q9NZM3 1697 aa6.83□□□□□ -1.32
PRKD3-208ENST00000475912 RNF17Q9BXT8 1623 aaKnown RBP6.83□□□□□ -1.32
PRKD3-208ENST00000475912 POLR1AO95602 1720 aaPredicted RBP6.82□□□□□ -1.32
PRKD3-208ENST00000475912 CDC42BPBQ9Y5S2 1711 aa6.82□□□□□ -1.32
PRKD3-208ENST00000475912 H7C1D1 291 aa6.82□□□□□ -1.32
PRKD3-208ENST00000475912 CBX4O00257 560 aa6.82□□□□□ -1.32
PRKD3-208ENST00000475912 ALDH6A1Q02252 535 aaKnown RBP6.82□□□□□ -1.32
PRKD3-208ENST00000475912 TBR1Q16650 682 aa6.82□□□□□ -1.32
PRKD3-208ENST00000475912 CFAP100Q494V2 611 aa6.82□□□□□ -1.32
PRKD3-208ENST00000475912 GRAMD4Q6IC98 578 aa6.82□□□□□ -1.32
PRKD3-208ENST00000475912 ZNF585AQ6P3V2 769 aa6.82□□□□□ -1.32
PRKD3-208ENST00000475912 FILIP1Q7Z7B0 1213 aa6.82□□□□□ -1.32
PRKD3-208ENST00000475912 SYNPOQ8N3V7 929 aa6.82□□□□□ -1.32
PRKD3-208ENST00000475912 CALML6Q8TD86 181 aa6.82□□□□□ -1.32
PRKD3-208ENST00000475912 C1QTNF3Q9BXJ4 246 aa6.82□□□□□ -1.32
PRKD3-208ENST00000475912 PCIF1Q9H4Z3 704 aa6.82□□□□□ -1.32
PRKD3-208ENST00000475912 B4GALT6Q9UBX8 382 aa6.82□□□□□ -1.32
PRKD3-208ENST00000475912 MRPL42Q9Y6G3 142 aaKnown RBP6.82□□□□□ -1.32
PRKD3-208ENST00000475912 TROQ12816 1431 aaPredicted RBP6.82□□□□□ -1.32
PRKD3-208ENST00000475912 PLXNC1O60486 1568 aa6.82□□□□□ -1.32
PRKD3-208ENST00000475912 SAMD9LQ8IVG5 1584 aa6.82□□□□□ -1.32
PRKD3-208ENST00000475912 PATE3B3GLJ2 98 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms