RNA–Protein interactions for RNA: ENST00000474658.6

APTX-219, Transcript of aprataxin, humanhuman

TSL 5

Gene APTX, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-219ENST00000474658 FAM109BQ6ICB4 259 aaPredicted RBP10.59□□□□□ -0.71
APTX-219ENST00000474658 CABP7Q86V35 215 aa10.59□□□□□ -0.71
APTX-219ENST00000474658 RHPN2Q8IUC4 686 aa10.59□□□□□ -0.71
APTX-219ENST00000474658 KSR1Q8IVT5 923 aa10.59□□□□□ -0.71
APTX-219ENST00000474658 EXOC8Q8IYI6 725 aa10.59□□□□□ -0.71
APTX-219ENST00000474658 USP38Q8NB14 1042 aa10.59□□□□□ -0.71
APTX-219ENST00000474658 TMEM40Q8WWA1 233 aa10.59□□□□□ -0.71
APTX-219ENST00000474658 AK8Q96MA6 479 aa10.59□□□□□ -0.71
APTX-219ENST00000474658 CLIC6Q96NY7 704 aa10.59□□□□□ -0.71
APTX-219ENST00000474658 PNMA5Q96PV4 448 aa10.59□□□□□ -0.71
APTX-219ENST00000474658 PLIN2Q99541 437 aa10.59□□□□□ -0.71
APTX-219ENST00000474658 MTRQ99707 1265 aa10.59□□□□□ -0.71
APTX-219ENST00000474658 IFIH1Q9BYX4 1025 aaKnown RBP10.59□□□□□ -0.71
APTX-219ENST00000474658 CSRNP2Q9H175 543 aa10.59□□□□□ -0.71
APTX-219ENST00000474658 XPNPEP1Q9NQW7 623 aa10.59□□□□□ -0.71
APTX-219ENST00000474658 PADI3Q9ULW8 664 aa10.59□□□□□ -0.71
APTX-219ENST00000474658 DNM3Q9UQ16 869 aa10.59□□□□□ -0.71
APTX-219ENST00000474658 NOC2LQ9Y3T9 749 aaKnown RBP10.59□□□□□ -0.71
APTX-219ENST00000474658 SRPRBQ9Y5M8 271 aaKnown RBP10.59□□□□□ -0.71
APTX-219ENST00000474658 SLC4A7Q9Y6M7 1214 aa10.59□□□□□ -0.71
APTX-219ENST00000474658 SQORQ9Y6N5 450 aa10.59□□□□□ -0.71
APTX-219ENST00000474658 LAMA2P24043 3122 aaKnown RBP10.59□□□□□ -0.71
APTX-219ENST00000474658 LOXHD1Q8IVV2 1947 aa10.58□□□□□ -0.72
APTX-219ENST00000474658 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.58□□□□□ -0.72
APTX-219ENST00000474658 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.58□□□□□ -0.72
APTX-219ENST00000474658 ARHGEF35A5YM69 484 aa10.58□□□□□ -0.72
APTX-219ENST00000474658 GRXCR1A8MXD5 290 aa10.58□□□□□ -0.72
APTX-219ENST00000474658 GAS2O43903 313 aaKnown RBP10.58□□□□□ -0.72
APTX-219ENST00000474658 USO1O60763 962 aaKnown RBP10.58□□□□□ -0.72
APTX-219ENST00000474658 RPS6KA5O75582 802 aa10.58□□□□□ -0.72
APTX-219ENST00000474658 DGAT1O75907 488 aa10.58□□□□□ -0.72
APTX-219ENST00000474658 UBA7P41226 1012 aa10.58□□□□□ -0.72
APTX-219ENST00000474658 WDR5P61964 334 aaKnown RBP10.58□□□□□ -0.72
APTX-219ENST00000474658 NFX1Q12986 1120 aaKnown RBP10.58□□□□□ -0.72
APTX-219ENST00000474658 PAK2Q13177 524 aa10.58□□□□□ -0.72
APTX-219ENST00000474658 GRB10Q13322 594 aa10.58□□□□□ -0.72
APTX-219ENST00000474658 SPECC1Q5M775 1068 aa10.58□□□□□ -0.72
APTX-219ENST00000474658 HYIQ5T013 277 aa10.58□□□□□ -0.72
APTX-219ENST00000474658 PADI6Q6TGC4 694 aa10.58□□□□□ -0.72
APTX-219ENST00000474658 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.58□□□□□ -0.72
APTX-219ENST00000474658 MAEAQ7L5Y9 396 aa10.58□□□□□ -0.72
APTX-219ENST00000474658 KCNK18Q7Z418 384 aa10.58□□□□□ -0.72
APTX-219ENST00000474658 ZNF710Q8N1W2 664 aa10.58□□□□□ -0.72
APTX-219ENST00000474658 LINC00301Q8NCQ3 95 aa10.58□□□□□ -0.72
APTX-219ENST00000474658 TCP11Q8WWU5 503 aa10.58□□□□□ -0.72
APTX-219ENST00000474658 PRPF31Q8WWY3 499 aaKnown RBP10.58□□□□□ -0.72
APTX-219ENST00000474658 NLRP7Q8WX94 980 aa10.58□□□□□ -0.72
APTX-219ENST00000474658 PSPC1Q8WXF1 523 aaKnown RBP10.58□□□□□ -0.72
APTX-219ENST00000474658 APBB2Q92870 758 aa10.58□□□□□ -0.72
APTX-219ENST00000474658 LRCH3Q96II8 777 aa10.58□□□□□ -0.72
APTX-219ENST00000474658 SCLT1Q96NL6 688 aa10.58□□□□□ -0.72
APTX-219ENST00000474658 BHMT2Q9H2M3 363 aa10.58□□□□□ -0.72
APTX-219ENST00000474658 ATP6V0A4Q9HBG4 840 aa10.58□□□□□ -0.72
APTX-219ENST00000474658 ERVK-5Q9HDB9 667 aa10.58□□□□□ -0.72
APTX-219ENST00000474658 ST3GAL5Q9UNP4 418 aa10.58□□□□□ -0.72
APTX-219ENST00000474658 MORC2Q9Y6X9 1032 aaPredicted RBP10.58□□□□□ -0.72
APTX-219ENST00000474658 LAMA3Q16787 3333 aa10.58□□□□□ -0.72
APTX-219ENST00000474658 A0A087WZ62 844 aa10.57□□□□□ -0.72
APTX-219ENST00000474658 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.57□□□□□ -0.72
APTX-219ENST00000474658 SPTLC2O15270 562 aa10.57□□□□□ -0.72
APTX-219ENST00000474658 EFCAB14O75071 495 aa10.57□□□□□ -0.72
APTX-219ENST00000474658 CSDE1O75534 798 aaKnown RBP10.57□□□□□ -0.72
APTX-219ENST00000474658 YEATS4O95619 227 aa10.57□□□□□ -0.72
APTX-219ENST00000474658 EYA4O95677 639 aa10.57□□□□□ -0.72
APTX-219ENST00000474658 DARSP14868 501 aaKnown RBP10.57□□□□□ -0.72
APTX-219ENST00000474658 ATP2A2P16615 1042 aaKnown RBP10.57□□□□□ -0.72
APTX-219ENST00000474658 CYP11B2P19099 503 aa10.57□□□□□ -0.72
APTX-219ENST00000474658 EIF4BP23588 611 aaKnown RBP10.57□□□□□ -0.72
APTX-219ENST00000474658 ARL2P36404 184 aa10.57□□□□□ -0.72
APTX-219ENST00000474658 KCNJ6P48051 423 aa10.57□□□□□ -0.72
APTX-219ENST00000474658 FXR1P51114 621 aaKnown RBP eCLIP10.57□□□□□ -0.72
APTX-219ENST00000474658 DEFB103AP81534 67 aa10.57□□□□□ -0.72
APTX-219ENST00000474658 CDC42EP1Q00587 391 aa10.57□□□□□ -0.72
APTX-219ENST00000474658 DNM1Q05193 864 aaKnown RBP10.57□□□□□ -0.72
APTX-219ENST00000474658 LAMTOR4Q0VGL1 99 aa10.57□□□□□ -0.72
APTX-219ENST00000474658 USP49Q70CQ1 688 aa10.57□□□□□ -0.72
APTX-219ENST00000474658 TMCO2Q7Z6W1 182 aaPredicted RBP10.57□□□□□ -0.72
APTX-219ENST00000474658 FAM228AQ86W67 206 aa10.57□□□□□ -0.72
APTX-219ENST00000474658 KRI1Q8N9T8 703 aaKnown RBP10.57□□□□□ -0.72
APTX-219ENST00000474658 EPSTI1Q96J88 318 aa10.57□□□□□ -0.72
APTX-219ENST00000474658 CDK5RAP3Q96JB5 506 aa10.57□□□□□ -0.72
APTX-219ENST00000474658 CHAMP1Q96JM3 812 aa10.57□□□□□ -0.72
APTX-219ENST00000474658 NLRP4Q96MN2 994 aa10.57□□□□□ -0.72
APTX-219ENST00000474658 FDXACB1Q9BRP7 624 aaPredicted RBP10.57□□□□□ -0.72
APTX-219ENST00000474658 NT5C3AQ9H0P0 336 aa10.57□□□□□ -0.72
APTX-219ENST00000474658 TMX1Q9H3N1 280 aa10.57□□□□□ -0.72
APTX-219ENST00000474658 GPRC5CQ9NQ84 441 aa10.57□□□□□ -0.72
APTX-219ENST00000474658 COL4A3BPQ9Y5P4 624 aa10.57□□□□□ -0.72
APTX-219ENST00000474658 ENPP3O14638 875 aa10.56□□□□□ -0.72
APTX-219ENST00000474658 GPR182O15218 404 aa10.56□□□□□ -0.72
APTX-219ENST00000474658 ASAP2O43150 1006 aa10.56□□□□□ -0.72
APTX-219ENST00000474658 SLC26A4O43511 780 aa10.56□□□□□ -0.72
APTX-219ENST00000474658 PPP6R2O75170 966 aa10.56□□□□□ -0.72
APTX-219ENST00000474658 SRGAP2CP0DJJ0 459 aa10.56□□□□□ -0.72
APTX-219ENST00000474658 FGFR4P22455 802 aa10.56□□□□□ -0.72
APTX-219ENST00000474658 GLRA2P23416 452 aa10.56□□□□□ -0.72
APTX-219ENST00000474658 DDIT3P35638 169 aa10.56□□□□□ -0.72
APTX-219ENST00000474658 PBX2P40425 430 aa10.56□□□□□ -0.72
APTX-219ENST00000474658 RABGGTBP53611 331 aa10.56□□□□□ -0.72
APTX-219ENST00000474658 SMAD3P84022 425 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 261.1 ms