RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 CSPG5O95196 566 aa10.13□□□□□ -0.79
USF1-204ENST00000472217 MMP1P03956 469 aa10.13□□□□□ -0.79
USF1-204ENST00000472217 ITGB1P05556 798 aa10.13□□□□□ -0.79
USF1-204ENST00000472217 FGFR1P11362 822 aa10.13□□□□□ -0.79
USF1-204ENST00000472217 DARSP14868 501 aaKnown RBP10.13□□□□□ -0.79
USF1-204ENST00000472217 FGFR4P22455 802 aa10.13□□□□□ -0.79
USF1-204ENST00000472217 KCNA5P22460 613 aa10.13□□□□□ -0.79
USF1-204ENST00000472217 FOSBP53539 338 aa10.13□□□□□ -0.79
USF1-204ENST00000472217 PSMC5P62195 406 aa10.13□□□□□ -0.79
USF1-204ENST00000472217 SPIRE1Q08AE8 756 aa10.13□□□□□ -0.79
USF1-204ENST00000472217 FAM102BQ5T8I3 360 aa10.13□□□□□ -0.79
USF1-204ENST00000472217 PLA2G4FQ68DD2 849 aa10.13□□□□□ -0.79
USF1-204ENST00000472217 ZNF710Q8N1W2 664 aa10.13□□□□□ -0.79
USF1-204ENST00000472217 TMEM161AQ9NX61 479 aa10.13□□□□□ -0.79
USF1-204ENST00000472217 WRAP73Q9P2S5 460 aaPredicted RBP10.13□□□□□ -0.79
USF1-204ENST00000472217 HCSTQ9UBK5 93 aa10.13□□□□□ -0.79
USF1-204ENST00000472217 PLXNA4Q9HCM2 1894 aa10.13□□□□□ -0.79
USF1-204ENST00000472217 ARID2Q68CP9 1835 aa10.12□□□□□ -0.79
USF1-204ENST00000472217 VCANP13611 3396 aa10.12□□□□□ -0.79
USF1-204ENST00000472217 TBKBP1A7MCY6 615 aa10.12□□□□□ -0.79
USF1-204ENST00000472217 BTBD18B2RXH4 712 aa10.12□□□□□ -0.79
USF1-204ENST00000472217 MARCH6O60337 910 aa10.12□□□□□ -0.79
USF1-204ENST00000472217 MAFO75444 373 aaPredicted RBP10.12□□□□□ -0.79
USF1-204ENST00000472217 CSDE1O75534 798 aaKnown RBP10.12□□□□□ -0.79
USF1-204ENST00000472217 P4HBP07237 508 aaKnown RBP10.12□□□□□ -0.79
USF1-204ENST00000472217 DNAJB1P25685 340 aa10.12□□□□□ -0.79
USF1-204ENST00000472217 QARSP47897 775 aaKnown RBP10.12□□□□□ -0.79
USF1-204ENST00000472217 DNM2P50570 870 aa10.12□□□□□ -0.79
USF1-204ENST00000472217 NPEPPSP55786 919 aa10.12□□□□□ -0.79
USF1-204ENST00000472217 FAM189BP81408 668 aa10.12□□□□□ -0.79
USF1-204ENST00000472217 CAMK1Q14012 370 aa10.12□□□□□ -0.79
USF1-204ENST00000472217 COL19A1Q14993 1142 aa10.12□□□□□ -0.79
USF1-204ENST00000472217 LEXMQ3ZCV2 418 aa10.12□□□□□ -0.79
USF1-204ENST00000472217 NAALADL2Q58DX5 795 aa10.12□□□□□ -0.79
USF1-204ENST00000472217 NCAPH2Q6IBW4 605 aa10.12□□□□□ -0.79
USF1-204ENST00000472217 DIS3L2Q8IYB7 885 aaKnown RBP10.12□□□□□ -0.79
USF1-204ENST00000472217 ZNF579Q8NAF0 562 aaKnown RBP10.12□□□□□ -0.79
USF1-204ENST00000472217 KLHL23Q8NBE8 558 aa10.12□□□□□ -0.79
USF1-204ENST00000472217 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.12□□□□□ -0.79
USF1-204ENST00000472217 NLRP7Q8WX94 980 aa10.12□□□□□ -0.79
USF1-204ENST00000472217 PABPC5Q96DU9 382 aaKnown RBP10.12□□□□□ -0.79
USF1-204ENST00000472217 LXNQ9BS40 222 aa10.12□□□□□ -0.79
USF1-204ENST00000472217 ELAC1Q9H777 363 aaKnown RBP10.12□□□□□ -0.79
USF1-204ENST00000472217 ATP6V0A4Q9HBG4 840 aa10.12□□□□□ -0.79
USF1-204ENST00000472217 CYP26B1Q9NR63 512 aa10.12□□□□□ -0.79
USF1-204ENST00000472217 RGL1Q9NZL6 768 aa10.12□□□□□ -0.79
USF1-204ENST00000472217 PLAGL2Q9UPG8 496 aa10.12□□□□□ -0.79
USF1-204ENST00000472217 A0A087WZ62 844 aa10.11□□□□□ -0.79
USF1-204ENST00000472217 H3BQ06 376 aaPredicted RBP10.11□□□□□ -0.79
USF1-204ENST00000472217 WNT7AO00755 349 aa10.11□□□□□ -0.79
USF1-204ENST00000472217 DKC1O60832 514 aaKnown RBP eCLIP10.11□□□□□ -0.79
USF1-204ENST00000472217 BAG4O95429 457 aaKnown RBP10.11□□□□□ -0.79
USF1-204ENST00000472217 ZSCAN20P17040 1043 aaPredicted RBP10.11□□□□□ -0.79
USF1-204ENST00000472217 HYAL1Q12794 435 aa10.11□□□□□ -0.79
USF1-204ENST00000472217 TRIM29Q14134 588 aa10.11□□□□□ -0.79
USF1-204ENST00000472217 EPHA7Q15375 998 aa10.11□□□□□ -0.79
USF1-204ENST00000472217 C8orf34Q49A92 452 aa10.11□□□□□ -0.79
USF1-204ENST00000472217 SPOUT1Q5T280 376 aaKnown RBP10.11□□□□□ -0.79
USF1-204ENST00000472217 EP400NLQ6ZTU2 488 aa10.11□□□□□ -0.79
USF1-204ENST00000472217 RHPN2Q8IUC4 686 aa10.11□□□□□ -0.79
USF1-204ENST00000472217 CCDC83Q8IWF9 413 aa10.11□□□□□ -0.79
USF1-204ENST00000472217 C4orf19Q8IY42 314 aa10.11□□□□□ -0.79
USF1-204ENST00000472217 SLFN12Q8IYM2 578 aa10.11□□□□□ -0.79
USF1-204ENST00000472217 SPPL3Q8TCT6 385 aa10.11□□□□□ -0.79
USF1-204ENST00000472217 NEK9Q8TD19 979 aa10.11□□□□□ -0.79
USF1-204ENST00000472217 DYDC2Q96IM9 177 aa10.11□□□□□ -0.79
USF1-204ENST00000472217 KIF2CQ99661 725 aa10.11□□□□□ -0.79
USF1-204ENST00000472217 FDXACB1Q9BRP7 624 aaPredicted RBP10.11□□□□□ -0.79
USF1-204ENST00000472217 GCOM2Q9BZD3 368 aaPredicted RBP10.11□□□□□ -0.79
USF1-204ENST00000472217 RNF19AQ9NV58 838 aa10.11□□□□□ -0.79
USF1-204ENST00000472217 SUCLA2Q9P2R7 463 aaPredicted RBP10.11□□□□□ -0.79
USF1-204ENST00000472217 LIMCH1Q9UPQ0 1083 aa10.11□□□□□ -0.79
USF1-204ENST00000472217 TTC28Q96AY4 2481 aa10.11□□□□□ -0.79
USF1-204ENST00000472217 NEMFO60524 1076 aa10.1□□□□□ -0.79
USF1-204ENST00000472217 ATXN8OSP0DMR3 200 aa10.1□□□□□ -0.79
USF1-204ENST00000472217 IL9P15248 144 aa10.1□□□□□ -0.79
USF1-204ENST00000472217 YWHABP31946 246 aaKnown RBP10.1□□□□□ -0.79
USF1-204ENST00000472217 GTF2F1P35269 517 aaKnown RBP eCLIP10.1□□□□□ -0.79
USF1-204ENST00000472217 IRS1P35568 1242 aa10.1□□□□□ -0.79
USF1-204ENST00000472217 POLGP54098 1239 aaPredicted RBP10.1□□□□□ -0.79
USF1-204ENST00000472217 CDC42EP1Q00587 391 aa10.1□□□□□ -0.79
USF1-204ENST00000472217 GUCY1B3Q02153 619 aa10.1□□□□□ -0.79
USF1-204ENST00000472217 CYP4A11Q02928 519 aa10.1□□□□□ -0.79
USF1-204ENST00000472217 CTTNQ14247 550 aaKnown RBP10.1□□□□□ -0.79
USF1-204ENST00000472217 CALCRLQ16602 461 aa10.1□□□□□ -0.79
USF1-204ENST00000472217 PTCRAQ6ISU1 281 aaPredicted RBP10.1□□□□□ -0.79
USF1-204ENST00000472217 ADGRD2Q7Z7M1 963 aa10.1□□□□□ -0.79
USF1-204ENST00000472217 ZNF410Q86VK4 478 aa10.1□□□□□ -0.79
USF1-204ENST00000472217 ECHDC2Q86YB7 292 aa10.1□□□□□ -0.79
USF1-204ENST00000472217 KSR1Q8IVT5 923 aa10.1□□□□□ -0.79
USF1-204ENST00000472217 COLGALT1Q8NBJ5 622 aa10.1□□□□□ -0.79
USF1-204ENST00000472217 RNF169Q8NCN4 708 aa10.1□□□□□ -0.79
USF1-204ENST00000472217 POF1BQ8WVV4 589 aa10.1□□□□□ -0.79
USF1-204ENST00000472217 SLC7A3Q8WY07 619 aa10.1□□□□□ -0.79
USF1-204ENST00000472217 CEP170P1Q96L14 293 aa10.1□□□□□ -0.79
USF1-204ENST00000472217 NLRP4Q96MN2 994 aa10.1□□□□□ -0.79
USF1-204ENST00000472217 CASD1Q96PB1 797 aa10.1□□□□□ -0.79
USF1-204ENST00000472217 JPH2Q9BR39 696 aaPredicted RBP10.1□□□□□ -0.79
USF1-204ENST00000472217 TMEM117Q9H0C3 514 aa10.1□□□□□ -0.79
USF1-204ENST00000472217 DHX33Q9H6R0 707 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms