RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 ARHGEF35A5YM69 484 aa25.93■■□□□ 1.74
SUMO3-205ENST00000466861 SOX1O00570 391 aaPredicted RBP25.93■■□□□ 1.74
SUMO3-205ENST00000466861 YEATS4O95619 227 aa25.93■■□□□ 1.74
SUMO3-205ENST00000466861 EYA4O95677 639 aa25.93■■□□□ 1.74
SUMO3-205ENST00000466861 DARSP14868 501 aaKnown RBP25.93■■□□□ 1.74
SUMO3-205ENST00000466861 CD52P31358 61 aa25.93■■□□□ 1.74
SUMO3-205ENST00000466861 TMEM40Q8WWA1 233 aa25.93■■□□□ 1.74
SUMO3-205ENST00000466861 XPNPEP1Q9NQW7 623 aa25.93■■□□□ 1.74
SUMO3-205ENST00000466861 NOC2LQ9Y3T9 749 aaKnown RBP25.93■■□□□ 1.74
SUMO3-205ENST00000466861 COL4A3BPQ9Y5P4 624 aa25.93■■□□□ 1.74
SUMO3-205ENST00000466861 TTC3P53804 2025 aa25.93■■□□□ 1.74
SUMO3-205ENST00000466861 PP2D1A8MPX8 630 aa25.92■■□□□ 1.74
SUMO3-205ENST00000466861 BRD1O95696 1058 aa25.92■■□□□ 1.74
SUMO3-205ENST00000466861 CYP11B2P19099 503 aa25.92■■□□□ 1.74
SUMO3-205ENST00000466861 UBA7P41226 1012 aa25.92■■□□□ 1.74
SUMO3-205ENST00000466861 RHPN2Q8IUC4 686 aa25.92■■□□□ 1.74
SUMO3-205ENST00000466861 LINC00301Q8NCQ3 95 aa25.92■■□□□ 1.74
SUMO3-205ENST00000466861 NLRP7Q8WX94 980 aa25.92■■□□□ 1.74
SUMO3-205ENST00000466861 SCLT1Q96NL6 688 aa25.92■■□□□ 1.74
SUMO3-205ENST00000466861 CCSER1Q9C0I3 900 aa25.92■■□□□ 1.74
SUMO3-205ENST00000466861 RNF216Q9NWF9 866 aaPredicted RBP25.92■■□□□ 1.74
SUMO3-205ENST00000466861 FBXO2Q9UK22 296 aaPredicted RBP25.92■■□□□ 1.74
SUMO3-205ENST00000466861 PCDHA11Q9Y5I1 949 aa25.92■■□□□ 1.74
SUMO3-205ENST00000466861 PTPRSQ13332 1948 aa25.92■■□□□ 1.74
SUMO3-205ENST00000466861 PPP6R2O75170 966 aa25.91■■□□□ 1.74
SUMO3-205ENST00000466861 CDC25AP30304 524 aa25.91■■□□□ 1.74
SUMO3-205ENST00000466861 CABP7Q86V35 215 aa25.91■■□□□ 1.74
SUMO3-205ENST00000466861 FAM228AQ86W67 206 aa25.91■■□□□ 1.74
SUMO3-205ENST00000466861 HERC6Q8IVU3 1022 aa25.91■■□□□ 1.74
SUMO3-205ENST00000466861 PRPF31Q8WWY3 499 aaKnown RBP25.91■■□□□ 1.74
SUMO3-205ENST00000466861 TMEM143Q96AN5 459 aa25.91■■□□□ 1.74
SUMO3-205ENST00000466861 CALML4Q96GE6 196 aa25.91■■□□□ 1.74
SUMO3-205ENST00000466861 CDK5RAP3Q96JB5 506 aa25.91■■□□□ 1.74
SUMO3-205ENST00000466861 CFAP45Q9UL16 551 aa25.91■■□□□ 1.74
SUMO3-205ENST00000466861 ST3GAL5Q9UNP4 418 aa25.91■■□□□ 1.74
SUMO3-205ENST00000466861 USO1O60763 962 aaKnown RBP25.9■■□□□ 1.74
SUMO3-205ENST00000466861 ARL2P36404 184 aa25.9■■□□□ 1.74
SUMO3-205ENST00000466861 LAMTOR4Q0VGL1 99 aa25.9■■□□□ 1.74
SUMO3-205ENST00000466861 PKP1Q13835 747 aa25.9■■□□□ 1.74
SUMO3-205ENST00000466861 TFDP1Q14186 410 aa25.9■■□□□ 1.74
SUMO3-205ENST00000466861 STK38Q15208 465 aa25.9■■□□□ 1.74
SUMO3-205ENST00000466861 PCBP1Q15365 356 aaKnown RBP eCLIP25.9■■□□□ 1.74
SUMO3-205ENST00000466861 PADI6Q6TGC4 694 aa25.9■■□□□ 1.74
SUMO3-205ENST00000466861 SRGAP1Q7Z6B7 1085 aa25.9■■□□□ 1.74
SUMO3-205ENST00000466861 IFNLR1Q8IU57 520 aaPredicted RBP25.9■■□□□ 1.74
SUMO3-205ENST00000466861 KRI1Q8N9T8 703 aaKnown RBP25.9■■□□□ 1.74
SUMO3-205ENST00000466861 TSPYL2Q9H2G4 693 aaPredicted RBP25.9■■□□□ 1.74
SUMO3-205ENST00000466861 BHMT2Q9H2M3 363 aa25.9■■□□□ 1.74
SUMO3-205ENST00000466861 MSRAQ9UJ68 235 aa25.9■■□□□ 1.74
SUMO3-205ENST00000466861 GBF1Q92538 1859 aa25.89■■□□□ 1.74
SUMO3-205ENST00000466861 A0A087WZ62 844 aa25.89■■□□□ 1.74
SUMO3-205ENST00000466861 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.89■■□□□ 1.74
SUMO3-205ENST00000466861 ENPP3O14638 875 aa25.89■■□□□ 1.74
SUMO3-205ENST00000466861 MARCKSP29966 332 aaPredicted RBP25.89■■□□□ 1.74
SUMO3-205ENST00000466861 NFX1Q12986 1120 aaKnown RBP25.89■■□□□ 1.74
SUMO3-205ENST00000466861 GRB10Q13322 594 aa25.89■■□□□ 1.74
SUMO3-205ENST00000466861 TMEM119Q4V9L6 283 aa25.89■■□□□ 1.74
SUMO3-205ENST00000466861 LRCH3Q96II8 777 aa25.89■■□□□ 1.74
SUMO3-205ENST00000466861 PNMA5Q96PV4 448 aa25.89■■□□□ 1.74
SUMO3-205ENST00000466861 FDXACB1Q9BRP7 624 aaPredicted RBP25.89■■□□□ 1.74
SUMO3-205ENST00000466861 TIPINQ9BVW5 301 aa25.89■■□□□ 1.74
SUMO3-205ENST00000466861 NFKBIZQ9BYH8 718 aa25.89■■□□□ 1.74
SUMO3-205ENST00000466861 C1orf112Q9NSG2 853 aa25.89■■□□□ 1.74
SUMO3-205ENST00000466861 ATP6V1DQ9Y5K8 247 aa25.89■■□□□ 1.74
SUMO3-205ENST00000466861 LAMA3Q16787 3333 aa25.89■■□□□ 1.73
SUMO3-205ENST00000466861 GJB5O95377 273 aa25.88■■□□□ 1.73
SUMO3-205ENST00000466861 SFPQP23246 707 aaKnown RBP eCLIP25.88■■□□□ 1.73
SUMO3-205ENST00000466861 DNAJB2P25686 324 aa25.88■■□□□ 1.73
SUMO3-205ENST00000466861 DEFB103AP81534 67 aa25.88■■□□□ 1.73
SUMO3-205ENST00000466861 CEBPZQ03701 1054 aaKnown RBP25.88■■□□□ 1.73
SUMO3-205ENST00000466861 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.88■■□□□ 1.73
SUMO3-205ENST00000466861 TOP1MTQ969P6 601 aa25.88■■□□□ 1.73
SUMO3-205ENST00000466861 NLRP4Q96MN2 994 aa25.88■■□□□ 1.73
SUMO3-205ENST00000466861 PPP1R16BQ96T49 567 aa25.88■■□□□ 1.73
SUMO3-205ENST00000466861 PBX4Q9BYU1 374 aa25.88■■□□□ 1.73
SUMO3-205ENST00000466861 CSRNP2Q9H175 543 aa25.88■■□□□ 1.73
SUMO3-205ENST00000466861 IFT122Q9HBG6 1241 aa25.88■■□□□ 1.73
SUMO3-205ENST00000466861 KCND2Q9NZV8 630 aa25.88■■□□□ 1.73
SUMO3-205ENST00000466861 A0A087WWV3 80 aa25.87■■□□□ 1.73
SUMO3-205ENST00000466861 GRXCR1A8MXD5 290 aa25.87■■□□□ 1.73
SUMO3-205ENST00000466861 SPTLC2O15270 562 aa25.87■■□□□ 1.73
SUMO3-205ENST00000466861 GRIN1Q05586 938 aa25.87■■□□□ 1.73
SUMO3-205ENST00000466861 FOXD4L5Q5VV16 416 aaPredicted RBP25.87■■□□□ 1.73
SUMO3-205ENST00000466861 KCNG4Q8TDN1 519 aa25.87■■□□□ 1.73
SUMO3-205ENST00000466861 FOXD4L4Q8WXT5 416 aaPredicted RBP25.87■■□□□ 1.73
SUMO3-205ENST00000466861 KIFAP3Q92845 792 aa25.87■■□□□ 1.73
SUMO3-205ENST00000466861 TMX1Q9H3N1 280 aa25.87■■□□□ 1.73
SUMO3-205ENST00000466861 CHST12Q9NRB3 414 aa25.87■■□□□ 1.73
SUMO3-205ENST00000466861 E9PMD0 336 aa25.86■■□□□ 1.73
SUMO3-205ENST00000466861 TXLNAP40222 546 aa25.86■■□□□ 1.73
SUMO3-205ENST00000466861 PHKA2P46019 1235 aa25.86■■□□□ 1.73
SUMO3-205ENST00000466861 PTENP60484 403 aa25.86■■□□□ 1.73
SUMO3-205ENST00000466861 KSR1Q8IVT5 923 aa25.86■■□□□ 1.73
SUMO3-205ENST00000466861 MYOCDQ8IZQ8 938 aa25.86■■□□□ 1.73
SUMO3-205ENST00000466861 SYT2Q8N9I0 419 aaPredicted RBP25.86■■□□□ 1.73
SUMO3-205ENST00000466861 RNF149Q8NC42 400 aa25.86■■□□□ 1.73
SUMO3-205ENST00000466861 TIFAQ96CG3 184 aa25.86■■□□□ 1.73
SUMO3-205ENST00000466861 RAD9AQ99638 391 aa25.86■■□□□ 1.73
SUMO3-205ENST00000466861 POLR3FQ9H1D9 316 aaPredicted RBP25.86■■□□□ 1.73
SUMO3-205ENST00000466861 RGS18Q9NS28 235 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms