RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 P4HBP07237 508 aaKnown RBP11.4□□□□□ -0.58
SF3A3-204ENST00000462258 DARSP14868 501 aaKnown RBP11.4□□□□□ -0.58
SF3A3-204ENST00000462258 EIF4BP23588 611 aaKnown RBP11.4□□□□□ -0.58
SF3A3-204ENST00000462258 GATMP50440 423 aa11.4□□□□□ -0.58
SF3A3-204ENST00000462258 MRPS5P82675 430 aaKnown RBP11.4□□□□□ -0.58
SF3A3-204ENST00000462258 CYP4A11Q02928 519 aa11.4□□□□□ -0.58
SF3A3-204ENST00000462258 TFF2Q03403 129 aa11.4□□□□□ -0.58
SF3A3-204ENST00000462258 EPHA7Q15375 998 aa11.4□□□□□ -0.58
SF3A3-204ENST00000462258 SLC24A5Q71RS6 500 aa11.4□□□□□ -0.58
SF3A3-204ENST00000462258 FAM184AQ8NB25 1140 aa11.4□□□□□ -0.58
SF3A3-204ENST00000462258 IL27Q8NEV9 243 aa11.4□□□□□ -0.58
SF3A3-204ENST00000462258 CLP1Q92989 425 aaKnown RBP11.4□□□□□ -0.58
SF3A3-204ENST00000462258 MRPL38Q96DV4 380 aaKnown RBP11.4□□□□□ -0.58
SF3A3-204ENST00000462258 ASB2Q96Q27 587 aa11.4□□□□□ -0.58
SF3A3-204ENST00000462258 JPH2Q9BR39 696 aaPredicted RBP11.4□□□□□ -0.58
SF3A3-204ENST00000462258 C11orf84Q9BUA3 381 aaPredicted RBP11.4□□□□□ -0.58
SF3A3-204ENST00000462258 UPF2Q9HAU5 1272 aaKnown RBP11.4□□□□□ -0.58
SF3A3-204ENST00000462258 CYP26B1Q9NR63 512 aa11.4□□□□□ -0.58
SF3A3-204ENST00000462258 RGS18Q9NS28 235 aa11.4□□□□□ -0.58
SF3A3-204ENST00000462258 WRAP73Q9P2S5 460 aaPredicted RBP11.4□□□□□ -0.58
SF3A3-204ENST00000462258 COG5Q9UP83 839 aa11.4□□□□□ -0.58
SF3A3-204ENST00000462258 MRPL42Q9Y6G3 142 aaKnown RBP11.4□□□□□ -0.58
SF3A3-204ENST00000462258 TCF20Q9UGU0 1960 aaKnown RBP11.39□□□□□ -0.59
SF3A3-204ENST00000462258 C9IYK1 514 aa11.39□□□□□ -0.59
SF3A3-204ENST00000462258 ST18O60284 1047 aa11.39□□□□□ -0.59
SF3A3-204ENST00000462258 MAFO75444 373 aaPredicted RBP11.39□□□□□ -0.59
SF3A3-204ENST00000462258 YWHABP31946 246 aaKnown RBP11.39□□□□□ -0.59
SF3A3-204ENST00000462258 BMPR1AP36894 532 aa11.39□□□□□ -0.59
SF3A3-204ENST00000462258 DNM2P50570 870 aa11.39□□□□□ -0.59
SF3A3-204ENST00000462258 POLGP54098 1239 aaPredicted RBP11.39□□□□□ -0.59
SF3A3-204ENST00000462258 NPEPPSP55786 919 aa11.39□□□□□ -0.59
SF3A3-204ENST00000462258 DSC3Q14574 896 aa11.39□□□□□ -0.59
SF3A3-204ENST00000462258 AAK1Q2M2I8 961 aa11.39□□□□□ -0.59
SF3A3-204ENST00000462258 C4orf19Q8IY42 314 aa11.39□□□□□ -0.59
SF3A3-204ENST00000462258 SLC7A3Q8WY07 619 aa11.39□□□□□ -0.59
SF3A3-204ENST00000462258 DYDC2Q96IM9 177 aa11.39□□□□□ -0.59
SF3A3-204ENST00000462258 CEP170P1Q96L14 293 aa11.39□□□□□ -0.59
SF3A3-204ENST00000462258 BMP2KQ9NSY1 1161 aaPredicted RBP11.39□□□□□ -0.59
SF3A3-204ENST00000462258 TMEM161AQ9NX61 479 aa11.39□□□□□ -0.59
SF3A3-204ENST00000462258 PPME1Q9Y570 386 aa11.39□□□□□ -0.59
SF3A3-204ENST00000462258 PCDHB7Q9Y5E2 793 aa11.39□□□□□ -0.59
SF3A3-204ENST00000462258 RB1P06400 928 aa11.38□□□□□ -0.59
SF3A3-204ENST00000462258 ZSCAN20P17040 1043 aaPredicted RBP11.38□□□□□ -0.59
SF3A3-204ENST00000462258 ATP2B1P20020 1258 aa11.38□□□□□ -0.59
SF3A3-204ENST00000462258 FGFR4P22455 802 aa11.38□□□□□ -0.59
SF3A3-204ENST00000462258 SFPQP23246 707 aaKnown RBP eCLIP11.38□□□□□ -0.59
SF3A3-204ENST00000462258 MCM7P33993 719 aa11.38□□□□□ -0.59
SF3A3-204ENST00000462258 RFC5P40937 340 aa11.38□□□□□ -0.59
SF3A3-204ENST00000462258 GNL2Q13823 731 aaKnown RBP11.38□□□□□ -0.59
SF3A3-204ENST00000462258 CTTNQ14247 550 aaKnown RBP11.38□□□□□ -0.59
SF3A3-204ENST00000462258 ZNF410Q86VK4 478 aa11.38□□□□□ -0.59
SF3A3-204ENST00000462258 RHPN2Q8IUC4 686 aa11.38□□□□□ -0.59
SF3A3-204ENST00000462258 FBXO18Q8NFZ0 1043 aa11.38□□□□□ -0.59
SF3A3-204ENST00000462258 NEK9Q8TD19 979 aa11.38□□□□□ -0.59
SF3A3-204ENST00000462258 HLA-CQ95604 372 aa11.38□□□□□ -0.59
SF3A3-204ENST00000462258 NLRP4Q96MN2 994 aa11.38□□□□□ -0.59
SF3A3-204ENST00000462258 PLVAPQ9BX97 442 aa11.38□□□□□ -0.59
SF3A3-204ENST00000462258 GCOM2Q9BZD3 368 aaPredicted RBP11.38□□□□□ -0.59
SF3A3-204ENST00000462258 LMAN2LQ9H0V9 348 aa11.38□□□□□ -0.59
SF3A3-204ENST00000462258 FOXP1Q9H334 677 aaPredicted RBP11.38□□□□□ -0.59
SF3A3-204ENST00000462258 NSUN3Q9H649 340 aaKnown RBP11.38□□□□□ -0.59
SF3A3-204ENST00000462258 ZSWIM4Q9H7M6 989 aa11.38□□□□□ -0.59
SF3A3-204ENST00000462258 TTC12Q9H892 705 aaPredicted RBP11.38□□□□□ -0.59
SF3A3-204ENST00000462258 ATP6V0A4Q9HBG4 840 aa11.38□□□□□ -0.59
SF3A3-204ENST00000462258 RGL1Q9NZL6 768 aa11.38□□□□□ -0.59
SF3A3-204ENST00000462258 SUCLA2Q9P2R7 463 aaPredicted RBP11.38□□□□□ -0.59
SF3A3-204ENST00000462258 PCDHA12Q9UN75 941 aa11.38□□□□□ -0.59
SF3A3-204ENST00000462258 A0A087WZ62 844 aa11.37□□□□□ -0.59
SF3A3-204ENST00000462258 POTEMA6NI47 508 aa11.37□□□□□ -0.59
SF3A3-204ENST00000462258 TBKBP1A7MCY6 615 aa11.37□□□□□ -0.59
SF3A3-204ENST00000462258 GRM6O15303 877 aa11.37□□□□□ -0.59
SF3A3-204ENST00000462258 CSPG5O95196 566 aa11.37□□□□□ -0.59
SF3A3-204ENST00000462258 FGFR1P11362 822 aa11.37□□□□□ -0.59
SF3A3-204ENST00000462258 TXKP42681 527 aa11.37□□□□□ -0.59
SF3A3-204ENST00000462258 KCNQ1P51787 676 aa11.37□□□□□ -0.59
SF3A3-204ENST00000462258 CDC42EP1Q00587 391 aa11.37□□□□□ -0.59
SF3A3-204ENST00000462258 ORC2Q13416 577 aaPredicted RBP11.37□□□□□ -0.59
SF3A3-204ENST00000462258 EMC2Q15006 297 aa11.37□□□□□ -0.59
SF3A3-204ENST00000462258 OTUD6AQ7L8S5 288 aa11.37□□□□□ -0.59
SF3A3-204ENST00000462258 EXOC8Q8IYI6 725 aa11.37□□□□□ -0.59
SF3A3-204ENST00000462258 ZNF579Q8NAF0 562 aaKnown RBP11.37□□□□□ -0.59
SF3A3-204ENST00000462258 ADAMTS19Q8TE59 1207 aa11.37□□□□□ -0.59
SF3A3-204ENST00000462258 PSPC1Q8WXF1 523 aaKnown RBP11.37□□□□□ -0.59
SF3A3-204ENST00000462258 P2RX5Q93086 422 aa11.37□□□□□ -0.59
SF3A3-204ENST00000462258 CCDC43Q96MW1 224 aaKnown RBP11.37□□□□□ -0.59
SF3A3-204ENST00000462258 MTMR9Q96QG7 549 aa11.37□□□□□ -0.59
SF3A3-204ENST00000462258 EIF2AK1Q9BQI3 630 aaKnown RBP11.37□□□□□ -0.59
SF3A3-204ENST00000462258 FDXACB1Q9BRP7 624 aaPredicted RBP11.37□□□□□ -0.59
SF3A3-204ENST00000462258 TMEM60Q9H2L4 133 aa11.37□□□□□ -0.59
SF3A3-204ENST00000462258 DHX33Q9H6R0 707 aaKnown RBP11.37□□□□□ -0.59
SF3A3-204ENST00000462258 ELAC1Q9H777 363 aaKnown RBP11.37□□□□□ -0.59
SF3A3-204ENST00000462258 UBE2ZQ9H832 354 aaPredicted RBP11.37□□□□□ -0.59
SF3A3-204ENST00000462258 COL4A3BPQ9Y5P4 624 aa11.37□□□□□ -0.59
SF3A3-204ENST00000462258 HOXA2O43364 376 aa11.36□□□□□ -0.59
SF3A3-204ENST00000462258 GAS2O43903 313 aaKnown RBP11.36□□□□□ -0.59
SF3A3-204ENST00000462258 CSDE1O75534 798 aaKnown RBP11.36□□□□□ -0.59
SF3A3-204ENST00000462258 XKR9Q5GH70 373 aa11.36□□□□□ -0.59
SF3A3-204ENST00000462258 TCEAL5Q5H9L2 206 aa11.36□□□□□ -0.59
SF3A3-204ENST00000462258 TTC38Q5R3I4 469 aa11.36□□□□□ -0.59
SF3A3-204ENST00000462258 SPOUT1Q5T280 376 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms