RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 TIGD5Q53EQ6 642 aa21.22■□□□□ 0.99
COL5A1-203ENST00000460264 NCAPH2Q6IBW4 605 aa21.22■□□□□ 0.99
COL5A1-203ENST00000460264 ADAMTS19Q8TE59 1207 aa21.22■□□□□ 0.99
COL5A1-203ENST00000460264 ZSCAN31Q96LW9 406 aaPredicted RBP21.22■□□□□ 0.99
COL5A1-203ENST00000460264 SCLT1Q96NL6 688 aa21.22■□□□□ 0.99
COL5A1-203ENST00000460264 PCDHB7Q9Y5E2 793 aa21.22■□□□□ 0.99
COL5A1-203ENST00000460264 MYO7AQ13402 2215 aa21.22■□□□□ 0.99
COL5A1-203ENST00000460264 DKC1O60832 514 aaKnown RBP eCLIP21.21■□□□□ 0.99
COL5A1-203ENST00000460264 MAFO75444 373 aaPredicted RBP21.21■□□□□ 0.99
COL5A1-203ENST00000460264 KCNQ1P51787 676 aa21.21■□□□□ 0.99
COL5A1-203ENST00000460264 GUCY1B3Q02153 619 aa21.21■□□□□ 0.99
COL5A1-203ENST00000460264 EPHA7Q15375 998 aa21.21■□□□□ 0.99
COL5A1-203ENST00000460264 CALCRLQ16602 461 aa21.21■□□□□ 0.99
COL5A1-203ENST00000460264 IL27Q8NEV9 243 aa21.21■□□□□ 0.99
COL5A1-203ENST00000460264 NLRP7Q8WX94 980 aa21.21■□□□□ 0.99
COL5A1-203ENST00000460264 LXNQ9BS40 222 aa21.21■□□□□ 0.99
COL5A1-203ENST00000460264 PLVAPQ9BX97 442 aa21.21■□□□□ 0.99
COL5A1-203ENST00000460264 CYP26B1Q9NR63 512 aa21.21■□□□□ 0.99
COL5A1-203ENST00000460264 SH2B1Q9NRF2 756 aaPredicted RBP21.21■□□□□ 0.99
COL5A1-203ENST00000460264 RNF216Q9NWF9 866 aaPredicted RBP21.21■□□□□ 0.99
COL5A1-203ENST00000460264 PLXNA4Q9HCM2 1894 aa21.21■□□□□ 0.99
COL5A1-203ENST00000460264 BDP1A6H8Y1 2624 aa21.21■□□□□ 0.99
COL5A1-203ENST00000460264 NEMFO60524 1076 aa21.2■□□□□ 0.98
COL5A1-203ENST00000460264 BMP1P13497 986 aa21.2■□□□□ 0.98
COL5A1-203ENST00000460264 DNM2P50570 870 aa21.2■□□□□ 0.98
COL5A1-203ENST00000460264 NPEPPSP55786 919 aa21.2■□□□□ 0.98
COL5A1-203ENST00000460264 C4orf19Q8IY42 314 aa21.2■□□□□ 0.98
COL5A1-203ENST00000460264 C8orf76Q96K31 380 aa21.2■□□□□ 0.98
COL5A1-203ENST00000460264 TMEM161AQ9NX61 479 aa21.2■□□□□ 0.98
COL5A1-203ENST00000460264 RGL1Q9NZL6 768 aa21.2■□□□□ 0.98
COL5A1-203ENST00000460264 GRM6O15303 877 aa21.19■□□□□ 0.98
COL5A1-203ENST00000460264 FAM189BP81408 668 aa21.19■□□□□ 0.98
COL5A1-203ENST00000460264 HMGN5P82970 282 aaKnown RBP21.19■□□□□ 0.98
COL5A1-203ENST00000460264 CDC42EP1Q00587 391 aa21.19■□□□□ 0.98
COL5A1-203ENST00000460264 SAFBQ15424 915 aaKnown RBP eCLIP21.19■□□□□ 0.98
COL5A1-203ENST00000460264 ZNF579Q8NAF0 562 aaKnown RBP21.19■□□□□ 0.98
COL5A1-203ENST00000460264 P2RX5Q93086 422 aa21.19■□□□□ 0.98
COL5A1-203ENST00000460264 DYDC2Q96IM9 177 aa21.19■□□□□ 0.98
COL5A1-203ENST00000460264 JPH2Q9BR39 696 aaPredicted RBP21.19■□□□□ 0.98
COL5A1-203ENST00000460264 LMAN2LQ9H0V9 348 aa21.19■□□□□ 0.98
COL5A1-203ENST00000460264 ELAC1Q9H777 363 aaKnown RBP21.19■□□□□ 0.98
COL5A1-203ENST00000460264 SUCLA2Q9P2R7 463 aaPredicted RBP21.19■□□□□ 0.98
COL5A1-203ENST00000460264 CSDE1O75534 798 aaKnown RBP21.18■□□□□ 0.98
COL5A1-203ENST00000460264 FGFR4P22455 802 aa21.18■□□□□ 0.98
COL5A1-203ENST00000460264 CYP4A11Q02928 519 aa21.18■□□□□ 0.98
COL5A1-203ENST00000460264 FAM102BQ5T8I3 360 aa21.18■□□□□ 0.98
COL5A1-203ENST00000460264 ZNF410Q86VK4 478 aa21.18■□□□□ 0.98
COL5A1-203ENST00000460264 SLC7A3Q8WY07 619 aa21.18■□□□□ 0.98
COL5A1-203ENST00000460264 CEP170P1Q96L14 293 aa21.18■□□□□ 0.98
COL5A1-203ENST00000460264 GCOM2Q9BZD3 368 aaPredicted RBP21.18■□□□□ 0.98
COL5A1-203ENST00000460264 NSUN3Q9H649 340 aaKnown RBP21.18■□□□□ 0.98
COL5A1-203ENST00000460264 ZSWIM4Q9H7M6 989 aa21.18■□□□□ 0.98
COL5A1-203ENST00000460264 UBE2ZQ9H832 354 aaPredicted RBP21.18■□□□□ 0.98
COL5A1-203ENST00000460264 PCDHA12Q9UN75 941 aa21.18■□□□□ 0.98
COL5A1-203ENST00000460264 PPME1Q9Y570 386 aa21.18■□□□□ 0.98
COL5A1-203ENST00000460264 A0A087WZ62 844 aa21.17■□□□□ 0.98
COL5A1-203ENST00000460264 TBKBP1A7MCY6 615 aa21.17■□□□□ 0.98
COL5A1-203ENST00000460264 FGFR1P11362 822 aa21.17■□□□□ 0.98
COL5A1-203ENST00000460264 ZSCAN20P17040 1043 aaPredicted RBP21.17■□□□□ 0.98
COL5A1-203ENST00000460264 YWHABP31946 246 aaKnown RBP21.17■□□□□ 0.98
COL5A1-203ENST00000460264 CTTNQ14247 550 aaKnown RBP21.17■□□□□ 0.98
COL5A1-203ENST00000460264 RABEP1Q15276 862 aa21.17■□□□□ 0.98
COL5A1-203ENST00000460264 TCEAL5Q5H9L2 206 aa21.17■□□□□ 0.98
COL5A1-203ENST00000460264 RHPN2Q8IUC4 686 aa21.17■□□□□ 0.98
COL5A1-203ENST00000460264 MTMR9Q96QG7 549 aa21.17■□□□□ 0.98
COL5A1-203ENST00000460264 UHRF1Q96T88 793 aaPredicted RBP21.17■□□□□ 0.98
COL5A1-203ENST00000460264 EIF2AK1Q9BQI3 630 aaKnown RBP21.17■□□□□ 0.98
COL5A1-203ENST00000460264 FDXACB1Q9BRP7 624 aaPredicted RBP21.17■□□□□ 0.98
COL5A1-203ENST00000460264 DHX33Q9H6R0 707 aaKnown RBP21.17■□□□□ 0.98
COL5A1-203ENST00000460264 TTC12Q9H892 705 aaPredicted RBP21.17■□□□□ 0.98
COL5A1-203ENST00000460264 ATP6V0A4Q9HBG4 840 aa21.17■□□□□ 0.98
COL5A1-203ENST00000460264 PLAGL2Q9UPG8 496 aa21.17■□□□□ 0.98
COL5A1-203ENST00000460264 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.16■□□□□ 0.98
COL5A1-203ENST00000460264 RFC5P40937 340 aa21.16■□□□□ 0.98
COL5A1-203ENST00000460264 POLGP54098 1239 aaPredicted RBP21.16■□□□□ 0.98
COL5A1-203ENST00000460264 NAALADL2Q58DX5 795 aa21.16■□□□□ 0.98
COL5A1-203ENST00000460264 ECHDC2Q86YB7 292 aa21.16■□□□□ 0.98
COL5A1-203ENST00000460264 KSR1Q8IVT5 923 aa21.16■□□□□ 0.98
COL5A1-203ENST00000460264 FBXO18Q8NFZ0 1043 aa21.16■□□□□ 0.98
COL5A1-203ENST00000460264 NLRP4Q96MN2 994 aa21.16■□□□□ 0.98
COL5A1-203ENST00000460264 TMEM60Q9H2L4 133 aa21.16■□□□□ 0.98
COL5A1-203ENST00000460264 ALG13Q9NP73 1137 aaKnown RBP21.16■□□□□ 0.98
COL5A1-203ENST00000460264 RNF19AQ9NV58 838 aa21.16■□□□□ 0.98
COL5A1-203ENST00000460264 ZBTB39O15060 712 aa21.15■□□□□ 0.98
COL5A1-203ENST00000460264 SLITRK3O94933 977 aa21.15■□□□□ 0.98
COL5A1-203ENST00000460264 ITGB1P05556 798 aa21.15■□□□□ 0.98
COL5A1-203ENST00000460264 SFPQP23246 707 aaKnown RBP eCLIP21.15■□□□□ 0.98
COL5A1-203ENST00000460264 MCM7P33993 719 aa21.15■□□□□ 0.98
COL5A1-203ENST00000460264 TXKP42681 527 aa21.15■□□□□ 0.98
COL5A1-203ENST00000460264 COL19A1Q14993 1142 aa21.15■□□□□ 0.98
COL5A1-203ENST00000460264 OTUD6AQ7L8S5 288 aa21.15■□□□□ 0.98
COL5A1-203ENST00000460264 TPH2Q8IWU9 490 aa21.15■□□□□ 0.98
COL5A1-203ENST00000460264 EXOC8Q8IYI6 725 aa21.15■□□□□ 0.98
COL5A1-203ENST00000460264 KLHL23Q8NBE8 558 aa21.15■□□□□ 0.98
COL5A1-203ENST00000460264 NEK9Q8TD19 979 aa21.15■□□□□ 0.98
COL5A1-203ENST00000460264 NECAB3Q96P71 396 aaPredicted RBP21.15■□□□□ 0.98
COL5A1-203ENST00000460264 HSD17B14Q9BPX1 270 aa21.15■□□□□ 0.98
COL5A1-203ENST00000460264 FOXP1Q9H334 677 aaPredicted RBP21.15■□□□□ 0.98
COL5A1-203ENST00000460264 BMP2KQ9NSY1 1161 aaPredicted RBP21.15■□□□□ 0.98
COL5A1-203ENST00000460264 HCSTQ9UBK5 93 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms