RNA–Protein interactions for RNA: ENST00000459249.1

RNU6ATAC28P-201, Transcript of RNA, U6atac small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6ATAC28P, Length 118 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC28P-201ENST00000459249 TRPV1Q8NER1 839 aa5.33□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 DNERQ8NFT8 737 aa5.33□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 NUP133Q8WUM0 1156 aa5.33□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 CHMP4CQ96CF2 233 aa5.33□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 KATNBL1Q9H079 304 aa5.33□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 EPN3Q9H201 632 aa5.33□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 ALDH8A1Q9H2A2 487 aaPredicted RBP5.33□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 CPVLQ9H3G5 476 aa5.33□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 LIN7BQ9HAP6 207 aa5.33□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 CNPY2Q9Y2B0 182 aa5.33□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 USP20Q9Y2K6 914 aa5.33□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 ZNFX1Q9P2E3 1918 aaKnown RBP5.33□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 PLXNA1Q9UIW2 1896 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 LRRC37A2A6NM11 1700 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 ASTN1O14525 1302 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 CNTNAP5Q8WYK1 1306 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 KLF18A0A0U1RQI7 1052 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 CCDC196A0A1B0GTZ2 297 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 E2F8A0AVK6 867 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 PTPDC1A2A3K4 754 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 FAM205CA6NFA0 338 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 B4DLN1 442 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 SPATA31C2B4DYI2 1134 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 hCG_1984214I3L0E3 225 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 DNM1LO00429 736 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 ENC1O14682 589 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 ZBTB43O43298 467 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 DHX16O60231 1041 aaKnown RBP5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 DUSP11O75319 330 aaKnown RBP5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 RASGRP1O95267 797 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 PLEKHA8P1O95397 391 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 CELA3AP09093 270 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 COL6A1P12109 1028 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 AKR1A1P14550 325 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 TAL1P17542 331 aaPredicted RBP5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 CASTP20810 708 aaKnown RBP5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 PAX3P23760 479 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 GRNP28799 593 aaKnown RBP5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 MCM4P33991 863 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 RNF144AP50876 292 aaPredicted RBP5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 ALDH5A1P51649 535 aaPredicted RBP5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 MRPL12P52815 198 aaKnown RBP5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 RPS6P62753 249 aaKnown RBP5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 NKX3-2P78367 333 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 CNTN2Q02246 1040 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 ACVR2BQ13705 512 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 SEPT6Q14141 434 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 USH1GQ495M9 461 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 LARP1BQ659C4 914 aaKnown RBP5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 SCARA3Q6AZY7 606 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 NSMFQ6X4W1 530 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 SLC30A10Q6XR72 485 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 RNF207Q6ZRF8 634 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 Q6ZUG5 572 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 LSRQ86X29 649 aaPredicted RBP5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 MICU3Q86XE3 530 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 WDR75Q8IWA0 830 aaKnown RBP5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 FAM178BQ8IXR5 827 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 CCDC144CPQ8IYA2 1237 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 SRBD1Q8N5C6 995 aaKnown RBP5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 ZNF713Q8N859 430 aaPredicted RBP5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 SYTL5Q8TDW5 730 aaPredicted RBP5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 RRP36Q96EU6 259 aaKnown RBP5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 PIGSQ96S52 555 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 MPHOSPH6Q99547 160 aaKnown RBP5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 KIF2CQ99661 725 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 MYL10Q9BUA6 226 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 SPATA9Q9BWV2 254 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 FAM126AQ9BYI3 521 aaPredicted RBP5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 LRRC2Q9BYS8 371 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 UPF3AQ9H1J1 476 aaKnown RBP5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 VTA1Q9NP79 307 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 PCDHA1Q9Y5I3 950 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 CYP46A1Q9Y6A2 500 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 LCTP09848 1927 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 FRMPD3Q5JV73 1810 aa5.32□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 FRMPD4Q14CM0 1322 aa5.31□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 GOLGA8AA7E2F4 631 aa5.31□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 GOLGA8BA8MQT2 603 aa5.31□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 GCOM1H8Y6P7 765 aaPredicted RBP5.31□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 ADAMTS4O75173 837 aa5.31□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 LDHAP00338 332 aaKnown RBP5.31□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 TFRCP02786 760 aaKnown RBP5.31□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 FAM153BP0C7A2 387 aa5.31□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 POLR2MP0CAP2 368 aa5.31□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 RARBP10826 455 aa5.31□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 CPEP16870 476 aa5.31□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 CALML3P27482 149 aa5.31□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 CST5P28325 142 aaPredicted RBP5.31□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 PLA2G4AP47712 749 aa5.31□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 METAP2P50579 478 aaKnown RBP eCLIP5.31□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 TOB2Q14106 344 aaPredicted RBP5.31□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 ZRSR2Q15696 482 aaKnown RBP5.31□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 FNDC3BQ53EP0 1204 aaKnown RBP5.31□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 ZFYVE27Q5T4F4 411 aa5.31□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 HGSNATQ68CP4 663 aa5.31□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 BNC2Q6ZN30 1099 aaPredicted RBP5.31□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 EEPD1Q7L9B9 569 aa5.31□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 REC114Q7Z4M0 266 aa5.31□□□□□ -1.56
RNU6ATAC28P-201ENST00000459249 NECAB2Q7Z6G3 386 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms