RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 FBXO47Q5MNV8 452 aa11.26□□□□□ -0.61
RFX3-210ENST00000457373 RASIP1Q5U651 963 aa11.26□□□□□ -0.61
RFX3-210ENST00000457373 LINC01465Q8N7H1 131 aa11.26□□□□□ -0.61
RFX3-210ENST00000457373 SNX29Q8TEQ0 813 aa11.26□□□□□ -0.61
RFX3-210ENST00000457373 PTCD2Q8WV60 388 aaKnown RBP11.26□□□□□ -0.61
RFX3-210ENST00000457373 CCDC43Q96MW1 224 aaKnown RBP11.26□□□□□ -0.61
RFX3-210ENST00000457373 CEP89Q96ST8 783 aa11.26□□□□□ -0.61
RFX3-210ENST00000457373 MAP7D2Q96T17 732 aa11.26□□□□□ -0.61
RFX3-210ENST00000457373 POLR3CQ9BUI4 534 aaPredicted RBP11.26□□□□□ -0.61
RFX3-210ENST00000457373 ZSCAN16Q9H4T2 348 aaPredicted RBP11.26□□□□□ -0.61
RFX3-210ENST00000457373 CLIC4Q9Y696 253 aa11.26□□□□□ -0.61
RFX3-210ENST00000457373 SLC4A7Q9Y6M7 1214 aa11.26□□□□□ -0.61
RFX3-210ENST00000457373 GBF1Q92538 1859 aa11.25□□□□□ -0.61
RFX3-210ENST00000457373 CEP290O15078 2479 aa11.25□□□□□ -0.61
RFX3-210ENST00000457373 IGKV6-21A0A0C4DH24 114 aa11.25□□□□□ -0.61
RFX3-210ENST00000457373 MAFO75444 373 aaPredicted RBP11.25□□□□□ -0.61
RFX3-210ENST00000457373 LYPLA2O95372 231 aa11.25□□□□□ -0.61
RFX3-210ENST00000457373 RPA1P27694 616 aa11.25□□□□□ -0.61
RFX3-210ENST00000457373 CD52P31358 61 aa11.25□□□□□ -0.61
RFX3-210ENST00000457373 KCNJ6P48051 423 aa11.25□□□□□ -0.61
RFX3-210ENST00000457373 DNM2P50570 870 aa11.25□□□□□ -0.61
RFX3-210ENST00000457373 FXR1P51114 621 aaKnown RBP eCLIP11.25□□□□□ -0.61
RFX3-210ENST00000457373 NLRP11P59045 1033 aaKnown RBP11.25□□□□□ -0.61
RFX3-210ENST00000457373 DRP2Q13474 957 aa11.25□□□□□ -0.61
RFX3-210ENST00000457373 MCM6Q14566 821 aa11.25□□□□□ -0.61
RFX3-210ENST00000457373 LPIN1Q14693 890 aa11.25□□□□□ -0.61
RFX3-210ENST00000457373 ZRSR1Q15695 479 aaKnown RBP11.25□□□□□ -0.61
RFX3-210ENST00000457373 ECM1Q16610 540 aa11.25□□□□□ -0.61
RFX3-210ENST00000457373 KIZQ2M2Z5 673 aa11.25□□□□□ -0.61
RFX3-210ENST00000457373 KRT79Q5XKE5 535 aa11.25□□□□□ -0.61
RFX3-210ENST00000457373 HAUS3Q68CZ6 603 aa11.25□□□□□ -0.61
RFX3-210ENST00000457373 FAM109BQ6ICB4 259 aaPredicted RBP11.25□□□□□ -0.61
RFX3-210ENST00000457373 IGSF22Q8N9C0 903 aa11.25□□□□□ -0.61
RFX3-210ENST00000457373 NACC1Q96RE7 527 aa11.25□□□□□ -0.61
RFX3-210ENST00000457373 OSMRQ99650 979 aa11.25□□□□□ -0.61
RFX3-210ENST00000457373 JPH2Q9BR39 696 aaPredicted RBP11.25□□□□□ -0.61
RFX3-210ENST00000457373 IFIH1Q9BYX4 1025 aaKnown RBP11.25□□□□□ -0.61
RFX3-210ENST00000457373 ANKEF1Q9NU02 776 aa11.25□□□□□ -0.61
RFX3-210ENST00000457373 SUCLA2Q9P2R7 463 aaPredicted RBP11.25□□□□□ -0.61
RFX3-210ENST00000457373 PTPRSQ13332 1948 aa11.25□□□□□ -0.61
RFX3-210ENST00000457373 MICAL3Q7RTP6 2002 aa11.25□□□□□ -0.61
RFX3-210ENST00000457373 ABHD14A-ACY1A0A1B0GW23 586 aa11.24□□□□□ -0.61
RFX3-210ENST00000457373 GPR32O75388 356 aa11.24□□□□□ -0.61
RFX3-210ENST00000457373 RPS6KA5O75582 802 aa11.24□□□□□ -0.61
RFX3-210ENST00000457373 BAIAP3O94812 1187 aa11.24□□□□□ -0.61
RFX3-210ENST00000457373 BMP15O95972 392 aa11.24□□□□□ -0.61
RFX3-210ENST00000457373 F13A1P00488 732 aa11.24□□□□□ -0.61
RFX3-210ENST00000457373 ZSCAN22P10073 491 aaPredicted RBP11.24□□□□□ -0.61
RFX3-210ENST00000457373 XRCC6P12956 609 aaKnown RBP eCLIP11.24□□□□□ -0.61
RFX3-210ENST00000457373 RFC5P40937 340 aa11.24□□□□□ -0.61
RFX3-210ENST00000457373 GPC3P51654 580 aa11.24□□□□□ -0.61
RFX3-210ENST00000457373 CRYBB1P53674 252 aaPredicted RBP11.24□□□□□ -0.61
RFX3-210ENST00000457373 WDR5P61964 334 aaKnown RBP11.24□□□□□ -0.61
RFX3-210ENST00000457373 NFX1Q12986 1120 aaKnown RBP11.24□□□□□ -0.61
RFX3-210ENST00000457373 FOXD4L6Q3SYB3 417 aaPredicted RBP11.24□□□□□ -0.61
RFX3-210ENST00000457373 ARL6IP4Q66PJ3 421 aaKnown RBP11.24□□□□□ -0.61
RFX3-210ENST00000457373 POTEGQ6S5H5 508 aa11.24□□□□□ -0.61
RFX3-210ENST00000457373 FOXD4L3Q6VB84 417 aaPredicted RBP11.24□□□□□ -0.61
RFX3-210ENST00000457373 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.24□□□□□ -0.61
RFX3-210ENST00000457373 TSHZ1Q6ZSZ6 1077 aa11.24□□□□□ -0.61
RFX3-210ENST00000457373 RHPN2Q8IUC4 686 aa11.24□□□□□ -0.61
RFX3-210ENST00000457373 EXOC8Q8IYI6 725 aa11.24□□□□□ -0.61
RFX3-210ENST00000457373 NLRP7Q8WX94 980 aa11.24□□□□□ -0.61
RFX3-210ENST00000457373 SLC7A3Q8WY07 619 aa11.24□□□□□ -0.61
RFX3-210ENST00000457373 SCLT1Q96NL6 688 aa11.24□□□□□ -0.61
RFX3-210ENST00000457373 USP28Q96RU2 1077 aa11.24□□□□□ -0.61
RFX3-210ENST00000457373 PHOX2BQ99453 314 aa11.24□□□□□ -0.61
RFX3-210ENST00000457373 PLIN2Q99541 437 aa11.24□□□□□ -0.61
RFX3-210ENST00000457373 MTRQ99707 1265 aa11.24□□□□□ -0.61
RFX3-210ENST00000457373 AGO3Q9H9G7 860 aaKnown RBP11.24□□□□□ -0.61
RFX3-210ENST00000457373 TFIP11Q9UBB9 837 aaKnown RBP11.24□□□□□ -0.61
RFX3-210ENST00000457373 KIAA1024Q9UPX6 916 aa11.24□□□□□ -0.61
RFX3-210ENST00000457373 NOC2LQ9Y3T9 749 aaKnown RBP11.24□□□□□ -0.61
RFX3-210ENST00000457373 KDM3AQ9Y4C1 1321 aa11.24□□□□□ -0.61
RFX3-210ENST00000457373 A0A087WZ62 844 aa11.23□□□□□ -0.61
RFX3-210ENST00000457373 E9PMD0 336 aa11.23□□□□□ -0.61
RFX3-210ENST00000457373 USO1O60763 962 aaKnown RBP11.23□□□□□ -0.61
RFX3-210ENST00000457373 PDIA4P13667 645 aaKnown RBP11.23□□□□□ -0.61
RFX3-210ENST00000457373 ATP2A2P16615 1042 aaKnown RBP11.23□□□□□ -0.61
RFX3-210ENST00000457373 MARCKSP29966 332 aaPredicted RBP11.23□□□□□ -0.61
RFX3-210ENST00000457373 CLCN1P35523 988 aa11.23□□□□□ -0.61
RFX3-210ENST00000457373 PBX2P40425 430 aa11.23□□□□□ -0.61
RFX3-210ENST00000457373 RARRES1P49788 294 aa11.23□□□□□ -0.61
RFX3-210ENST00000457373 RABGGTBP53611 331 aa11.23□□□□□ -0.61
RFX3-210ENST00000457373 DEFB103AP81534 67 aa11.23□□□□□ -0.61
RFX3-210ENST00000457373 SMAD3P84022 425 aaKnown RBP11.23□□□□□ -0.61
RFX3-210ENST00000457373 GRIN1Q05586 938 aa11.23□□□□□ -0.61
RFX3-210ENST00000457373 PAK2Q13177 524 aa11.23□□□□□ -0.61
RFX3-210ENST00000457373 PKP1Q13835 747 aa11.23□□□□□ -0.61
RFX3-210ENST00000457373 EMC2Q15006 297 aa11.23□□□□□ -0.61
RFX3-210ENST00000457373 PTPAQ15257 358 aa11.23□□□□□ -0.61
RFX3-210ENST00000457373 FAM117BQ6P1L5 589 aa11.23□□□□□ -0.61
RFX3-210ENST00000457373 MAEAQ7L5Y9 396 aa11.23□□□□□ -0.61
RFX3-210ENST00000457373 TMCO2Q7Z6W1 182 aaPredicted RBP11.23□□□□□ -0.61
RFX3-210ENST00000457373 KSR1Q8IVT5 923 aa11.23□□□□□ -0.61
RFX3-210ENST00000457373 USP38Q8NB14 1042 aa11.23□□□□□ -0.61
RFX3-210ENST00000457373 TMEM40Q8WWA1 233 aa11.23□□□□□ -0.61
RFX3-210ENST00000457373 TCP11Q8WWU5 503 aa11.23□□□□□ -0.61
RFX3-210ENST00000457373 APBB2Q92870 758 aa11.23□□□□□ -0.61
RFX3-210ENST00000457373 TMEM143Q96AN5 459 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms