RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 CXCL14O95715 111 aa19.56■□□□□ 0.72
UBE2D4-209ENST00000454428 ATAT1Q5SQI0 421 aa19.56■□□□□ 0.72
UBE2D4-209ENST00000454428 WWC2Q6AWC2 1192 aa19.56■□□□□ 0.72
UBE2D4-209ENST00000454428 SWSAP1Q6NVH7 229 aa19.56■□□□□ 0.72
UBE2D4-209ENST00000454428 PDXDC2PQ6P474 469 aa19.56■□□□□ 0.72
UBE2D4-209ENST00000454428 TMTC3Q6ZXV5 915 aa19.56■□□□□ 0.72
UBE2D4-209ENST00000454428 PLCD3Q8N3E9 789 aa19.56■□□□□ 0.72
UBE2D4-209ENST00000454428 LINC01465Q8N7H1 131 aa19.56■□□□□ 0.72
UBE2D4-209ENST00000454428 RMDN1Q96DB5 314 aa19.56■□□□□ 0.72
UBE2D4-209ENST00000454428 CEP250Q9BV73 2442 aa19.56■□□□□ 0.72
UBE2D4-209ENST00000454428 PRC1O43663 620 aa19.55■□□□□ 0.72
UBE2D4-209ENST00000454428 CHMLP26374 656 aa19.55■□□□□ 0.72
UBE2D4-209ENST00000454428 METAP2P50579 478 aaKnown RBP eCLIP19.55■□□□□ 0.72
UBE2D4-209ENST00000454428 CLCN3P51790 818 aa19.55■□□□□ 0.72
UBE2D4-209ENST00000454428 BCAR1P56945 870 aa19.55■□□□□ 0.72
UBE2D4-209ENST00000454428 ABI1Q8IZP0 508 aa19.55■□□□□ 0.72
UBE2D4-209ENST00000454428 METTL13Q8N6R0 699 aa19.55■□□□□ 0.72
UBE2D4-209ENST00000454428 DTWD2Q8NBA8 298 aa19.55■□□□□ 0.72
UBE2D4-209ENST00000454428 HELQQ8TDG4 1101 aa19.55■□□□□ 0.72
UBE2D4-209ENST00000454428 MTA3Q9BTC8 594 aa19.55■□□□□ 0.72
UBE2D4-209ENST00000454428 ANO3Q9BYT9 981 aa19.55■□□□□ 0.72
UBE2D4-209ENST00000454428 RIC8AQ9NPQ8 531 aa19.55■□□□□ 0.72
UBE2D4-209ENST00000454428 CYP26B1Q9NR63 512 aa19.55■□□□□ 0.72
UBE2D4-209ENST00000454428 DZANK1Q9NVP4 752 aa19.55■□□□□ 0.72
UBE2D4-209ENST00000454428 MAFBQ9Y5Q3 323 aaPredicted RBP19.55■□□□□ 0.72
UBE2D4-209ENST00000454428 IRAK3Q9Y616 596 aa19.55■□□□□ 0.72
UBE2D4-209ENST00000454428 OTOGLQ3ZCN5 2332 aa19.54■□□□□ 0.72
UBE2D4-209ENST00000454428 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.54■□□□□ 0.72
UBE2D4-209ENST00000454428 FAM86B1E9PN63 330 aa19.54■□□□□ 0.72
UBE2D4-209ENST00000454428 FAM86B2P0C5J1 330 aa19.54■□□□□ 0.72
UBE2D4-209ENST00000454428 SREBF1P36956 1147 aa19.54■□□□□ 0.72
UBE2D4-209ENST00000454428 NLRP11P59045 1033 aaKnown RBP19.54■□□□□ 0.72
UBE2D4-209ENST00000454428 TMC5Q6UXY8 1006 aa19.54■□□□□ 0.72
UBE2D4-209ENST00000454428 VPS52Q8N1B4 723 aa19.54■□□□□ 0.72
UBE2D4-209ENST00000454428 RNF169Q8NCN4 708 aa19.54■□□□□ 0.72
UBE2D4-209ENST00000454428 BCL7CQ8WUZ0 217 aaPredicted RBP19.54■□□□□ 0.72
UBE2D4-209ENST00000454428 MAP4K1Q92918 833 aa19.54■□□□□ 0.72
UBE2D4-209ENST00000454428 DUSP12Q9UNI6 340 aa19.54■□□□□ 0.72
UBE2D4-209ENST00000454428 EPG5Q9HCE0 2579 aa19.54■□□□□ 0.72
UBE2D4-209ENST00000454428 IGLV3-22A0A075B6J6 115 aa19.53■□□□□ 0.72
UBE2D4-209ENST00000454428 A0A0U1RQF3 1178 aa19.53■□□□□ 0.72
UBE2D4-209ENST00000454428 CLK2P49760 499 aaKnown RBP19.53■□□□□ 0.72
UBE2D4-209ENST00000454428 TDGQ13569 410 aa19.53■□□□□ 0.72
UBE2D4-209ENST00000454428 TTC22Q5TAA0 569 aa19.53■□□□□ 0.72
UBE2D4-209ENST00000454428 NFXL1Q6ZNB6 911 aa19.53■□□□□ 0.72
UBE2D4-209ENST00000454428 NIPA1Q7RTP0 329 aa19.53■□□□□ 0.72
UBE2D4-209ENST00000454428 BBXQ8WY36 941 aaPredicted RBP19.53■□□□□ 0.72
UBE2D4-209ENST00000454428 ZNF668Q96K58 619 aaPredicted RBP19.53■□□□□ 0.72
UBE2D4-209ENST00000454428 VN1R3Q9BXE9 311 aa19.53■□□□□ 0.72
UBE2D4-209ENST00000454428 KMT2BQ9UMN6 2715 aaPredicted RBP19.53■□□□□ 0.72
UBE2D4-209ENST00000454428 CACNA1BQ00975 2339 aa19.53■□□□□ 0.72
UBE2D4-209ENST00000454428 CNTNAP5Q8WYK1 1306 aa19.52■□□□□ 0.72
UBE2D4-209ENST00000454428 CCDC69A6NI79 296 aa19.52■□□□□ 0.72
UBE2D4-209ENST00000454428 SGSM2O43147 1006 aa19.52■□□□□ 0.72
UBE2D4-209ENST00000454428 CTSAP10619 480 aa19.52■□□□□ 0.72
UBE2D4-209ENST00000454428 ZSCAN20P17040 1043 aaPredicted RBP19.52■□□□□ 0.72
UBE2D4-209ENST00000454428 FGFR4P22455 802 aa19.52■□□□□ 0.72
UBE2D4-209ENST00000454428 EIF4BP23588 611 aaKnown RBP19.52■□□□□ 0.72
UBE2D4-209ENST00000454428 CA8P35219 290 aa19.52■□□□□ 0.72
UBE2D4-209ENST00000454428 LIFRP42702 1097 aa19.52■□□□□ 0.72
UBE2D4-209ENST00000454428 MIS18BP1Q6P0N0 1132 aa19.52■□□□□ 0.72
UBE2D4-209ENST00000454428 CASC1Q6TDU7 716 aa19.52■□□□□ 0.72
UBE2D4-209ENST00000454428 TRMT1LQ7Z2T5 733 aaKnown RBP19.52■□□□□ 0.72
UBE2D4-209ENST00000454428 GPR149Q86SP6 731 aa19.52■□□□□ 0.72
UBE2D4-209ENST00000454428 SIX5Q8N196 739 aa19.52■□□□□ 0.72
UBE2D4-209ENST00000454428 FANCBQ8NB91 859 aa19.52■□□□□ 0.72
UBE2D4-209ENST00000454428 CRYGNQ8WXF5 182 aa19.52■□□□□ 0.72
UBE2D4-209ENST00000454428 KCNK12Q9HB15 430 aa19.52■□□□□ 0.72
UBE2D4-209ENST00000454428 NARSO43776 548 aaKnown RBP19.51■□□□□ 0.71
UBE2D4-209ENST00000454428 FOSP01100 380 aaPredicted RBP19.51■□□□□ 0.71
UBE2D4-209ENST00000454428 CALM1P0DP23 149 aa19.51■□□□□ 0.71
UBE2D4-209ENST00000454428 CALM2P0DP24 149 aa19.51■□□□□ 0.71
UBE2D4-209ENST00000454428 CALM3P0DP25 149 aa19.51■□□□□ 0.71
UBE2D4-209ENST00000454428 ALDH7A1P49419 539 aaKnown RBP19.51■□□□□ 0.71
UBE2D4-209ENST00000454428 CKAP2LQ8IYA6 745 aa19.51■□□□□ 0.71
UBE2D4-209ENST00000454428 TMTC2Q8N394 836 aa19.51■□□□□ 0.71
UBE2D4-209ENST00000454428 LRRC71Q8N4P6 559 aa19.51■□□□□ 0.71
UBE2D4-209ENST00000454428 RUFY2Q8WXA3 655 aa19.51■□□□□ 0.71
UBE2D4-209ENST00000454428 TMEM169Q96HH4 297 aa19.51■□□□□ 0.71
UBE2D4-209ENST00000454428 TMEM87BQ96K49 555 aa19.51■□□□□ 0.71
UBE2D4-209ENST00000454428 RTP3Q9BQQ7 232 aa19.51■□□□□ 0.71
UBE2D4-209ENST00000454428 RBM8AQ9Y5S9 174 aaKnown RBP19.51■□□□□ 0.71
UBE2D4-209ENST00000454428 FANCMQ8IYD8 2048 aa19.51■□□□□ 0.71
UBE2D4-209ENST00000454428 IPO5O00410 1097 aaKnown RBP19.5■□□□□ 0.71
UBE2D4-209ENST00000454428 N4BP1O75113 896 aaKnown RBP19.5■□□□□ 0.71
UBE2D4-209ENST00000454428 GPC3P51654 580 aa19.5■□□□□ 0.71
UBE2D4-209ENST00000454428 NAPAP54920 295 aa19.5■□□□□ 0.71
UBE2D4-209ENST00000454428 FUT2Q10981 343 aa19.5■□□□□ 0.71
UBE2D4-209ENST00000454428 AAMPQ13685 434 aa19.5■□□□□ 0.71
UBE2D4-209ENST00000454428 EFCAB12Q6NXP0 572 aa19.5■□□□□ 0.71
UBE2D4-209ENST00000454428 DDX53Q86TM3 631 aaKnown RBP19.5■□□□□ 0.71
UBE2D4-209ENST00000454428 CABP7Q86V35 215 aa19.5■□□□□ 0.71
UBE2D4-209ENST00000454428 PLA2G4DQ86XP0 818 aa19.5■□□□□ 0.71
UBE2D4-209ENST00000454428 ACSF2Q96CM8 615 aaPredicted RBP19.5■□□□□ 0.71
UBE2D4-209ENST00000454428 IGSF21Q96ID5 467 aa19.5■□□□□ 0.71
UBE2D4-209ENST00000454428 MRPL9Q9BYD2 267 aaKnown RBP19.5■□□□□ 0.71
UBE2D4-209ENST00000454428 AKT3Q9Y243 479 aa19.5■□□□□ 0.71
UBE2D4-209ENST00000454428 KRBA1A5PL33 1030 aa19.49■□□□□ 0.71
UBE2D4-209ENST00000454428 ADAMTS3O15072 1205 aa19.49■□□□□ 0.71
UBE2D4-209ENST00000454428 B4GALT3O60512 393 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms