RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 TMEM117Q9H0C3 514 aa23.39■■□□□ 1.33
CPNE1-219ENST00000440240 UNC45AQ9H3U1 944 aa23.39■■□□□ 1.33
CPNE1-219ENST00000440240 TLR9Q9NR96 1032 aa23.39■■□□□ 1.33
CPNE1-219ENST00000440240 CLEC1BQ9P126 229 aa23.39■■□□□ 1.33
CPNE1-219ENST00000440240 PUF60Q9UHX1 559 aaKnown RBP23.39■■□□□ 1.33
CPNE1-219ENST00000440240 PSMD10O75832 226 aa23.38■■□□□ 1.33
CPNE1-219ENST00000440240 COASYQ13057 564 aa23.38■■□□□ 1.33
CPNE1-219ENST00000440240 ABI1Q8IZP0 508 aa23.38■■□□□ 1.33
CPNE1-219ENST00000440240 BLIDQ8IZY5 108 aa23.38■■□□□ 1.33
CPNE1-219ENST00000440240 COLGALT1Q8NBJ5 622 aa23.38■■□□□ 1.33
CPNE1-219ENST00000440240 GPC3P51654 580 aa23.37■■□□□ 1.33
CPNE1-219ENST00000440240 UGCGQ16739 394 aa23.37■■□□□ 1.33
CPNE1-219ENST00000440240 MOXD1Q6UVY6 613 aa23.37■■□□□ 1.33
CPNE1-219ENST00000440240 MIER3Q7Z3K6 550 aa23.37■■□□□ 1.33
CPNE1-219ENST00000440240 SMRP1Q8NCR6 262 aa23.37■■□□□ 1.33
CPNE1-219ENST00000440240 SCLT1Q96NL6 688 aa23.37■■□□□ 1.33
CPNE1-219ENST00000440240 CDCA3Q99618 268 aaPredicted RBP23.37■■□□□ 1.33
CPNE1-219ENST00000440240 NIFKQ9BYG3 293 aaKnown RBP23.37■■□□□ 1.33
CPNE1-219ENST00000440240 CWH43Q9H720 699 aa23.37■■□□□ 1.33
CPNE1-219ENST00000440240 LZTS1Q9Y250 596 aa23.37■■□□□ 1.33
CPNE1-219ENST00000440240 ATG2AQ2TAZ0 1938 aa23.37■■□□□ 1.33
CPNE1-219ENST00000440240 DARSP14868 501 aaKnown RBP23.36■■□□□ 1.33
CPNE1-219ENST00000440240 DNM2P50570 870 aa23.36■■□□□ 1.33
CPNE1-219ENST00000440240 PLCB3Q01970 1234 aa23.36■■□□□ 1.33
CPNE1-219ENST00000440240 TARBP2Q15633 366 aaKnown RBP23.36■■□□□ 1.33
CPNE1-219ENST00000440240 XKR3Q5GH77 459 aa23.36■■□□□ 1.33
CPNE1-219ENST00000440240 DAGLBQ8NCG7 672 aa23.36■■□□□ 1.33
CPNE1-219ENST00000440240 CASD1Q96PB1 797 aa23.36■■□□□ 1.33
CPNE1-219ENST00000440240 C5orf42Q9H799 3197 aa23.36■■□□□ 1.33
CPNE1-219ENST00000440240 M0R2N6 131 aa23.35■■□□□ 1.33
CPNE1-219ENST00000440240 EOMESO95936 686 aa23.35■■□□□ 1.33
CPNE1-219ENST00000440240 ERVFC1P60507 584 aa23.35■■□□□ 1.33
CPNE1-219ENST00000440240 ECHDC2Q86YB7 292 aa23.35■■□□□ 1.33
CPNE1-219ENST00000440240 NLRP7Q8WX94 980 aa23.35■■□□□ 1.33
CPNE1-219ENST00000440240 GJA10Q969M2 543 aa23.35■■□□□ 1.33
CPNE1-219ENST00000440240 DACT1Q9NYF0 836 aa23.35■■□□□ 1.33
CPNE1-219ENST00000440240 PCDHGC5Q9Y5F6 944 aa23.35■■□□□ 1.33
CPNE1-219ENST00000440240 FNDC1Q4ZHG4 1894 aaPredicted RBP23.34■■□□□ 1.33
CPNE1-219ENST00000440240 KIAA1671Q9BY89 1806 aa23.34■■□□□ 1.33
CPNE1-219ENST00000440240 A0A0U1RQF3 1178 aa23.34■■□□□ 1.33
CPNE1-219ENST00000440240 PER2O15055 1255 aa23.34■■□□□ 1.33
CPNE1-219ENST00000440240 TDP2O95551 362 aa23.34■■□□□ 1.33
CPNE1-219ENST00000440240 PPM1AP35813 382 aa23.34■■□□□ 1.33
CPNE1-219ENST00000440240 KRT17Q04695 432 aa23.34■■□□□ 1.33
CPNE1-219ENST00000440240 NONOQ15233 471 aaKnown RBP eCLIP23.34■■□□□ 1.33
CPNE1-219ENST00000440240 KCNT2Q6UVM3 1135 aa23.34■■□□□ 1.33
CPNE1-219ENST00000440240 B3GNT9Q6UX72 402 aa23.34■■□□□ 1.33
CPNE1-219ENST00000440240 RNF135Q8IUD6 432 aa23.34■■□□□ 1.33
CPNE1-219ENST00000440240 LRRC43Q8N309 656 aa23.34■■□□□ 1.33
CPNE1-219ENST00000440240 MRPS27Q92552 414 aaKnown RBP23.34■■□□□ 1.33
CPNE1-219ENST00000440240 ZNF668Q96K58 619 aaPredicted RBP23.34■■□□□ 1.33
CPNE1-219ENST00000440240 MBOAT7Q96N66 472 aa23.34■■□□□ 1.33
CPNE1-219ENST00000440240 GCOM2Q9BZD3 368 aaPredicted RBP23.34■■□□□ 1.33
CPNE1-219ENST00000440240 HCSTQ9UBK5 93 aa23.34■■□□□ 1.33
CPNE1-219ENST00000440240 SEPT9Q9UHD8 586 aaPredicted RBP23.34■■□□□ 1.33
CPNE1-219ENST00000440240 MUC6Q6W4X9 2439 aa23.33■■□□□ 1.33
CPNE1-219ENST00000440240 GLP2RO95838 553 aa23.33■■□□□ 1.33
CPNE1-219ENST00000440240 STK3Q13188 491 aa23.33■■□□□ 1.33
CPNE1-219ENST00000440240 DUSP6Q16828 381 aa23.33■■□□□ 1.33
CPNE1-219ENST00000440240 HERC4Q5GLZ8 1057 aaPredicted RBP23.33■■□□□ 1.33
CPNE1-219ENST00000440240 LRRC55Q6ZSA7 311 aa23.33■■□□□ 1.33
CPNE1-219ENST00000440240 KRT25Q7Z3Z0 450 aa23.33■■□□□ 1.33
CPNE1-219ENST00000440240 ZNF558Q96NG5 402 aa23.33■■□□□ 1.33
CPNE1-219ENST00000440240 LARP6Q9BRS8 491 aaKnown RBP23.33■■□□□ 1.33
CPNE1-219ENST00000440240 NGRNQ9NPE2 291 aaKnown RBP23.33■■□□□ 1.33
CPNE1-219ENST00000440240 CHST12Q9NRB3 414 aa23.33■■□□□ 1.33
CPNE1-219ENST00000440240 PDRG1Q9NUG6 133 aa23.33■■□□□ 1.33
CPNE1-219ENST00000440240 DDX25Q9UHL0 483 aaKnown RBP23.33■■□□□ 1.33
CPNE1-219ENST00000440240 BARX2Q9UMQ3 279 aaPredicted RBP23.33■■□□□ 1.33
CPNE1-219ENST00000440240 FSCN2O14926 492 aa23.32■■□□□ 1.32
CPNE1-219ENST00000440240 CDKL5O76039 1030 aa23.32■■□□□ 1.32
CPNE1-219ENST00000440240 SRGAP2BP0DMP2 458 aa23.32■■□□□ 1.32
CPNE1-219ENST00000440240 MTERF2Q49AM1 385 aa23.32■■□□□ 1.32
CPNE1-219ENST00000440240 RNF169Q8NCN4 708 aa23.32■■□□□ 1.32
CPNE1-219ENST00000440240 ETNPPLQ8TBG4 499 aa23.32■■□□□ 1.32
CPNE1-219ENST00000440240 INO80BQ9C086 356 aaPredicted RBP23.32■■□□□ 1.32
CPNE1-219ENST00000440240 RNF19AQ9NV58 838 aa23.32■■□□□ 1.32
CPNE1-219ENST00000440240 IGKV6-21A0A0C4DH24 114 aa23.31■■□□□ 1.32
CPNE1-219ENST00000440240 DDX11L8A8MPP1 907 aa23.31■■□□□ 1.32
CPNE1-219ENST00000440240 STBD1O95210 358 aa23.31■■□□□ 1.32
CPNE1-219ENST00000440240 XBP1P17861 261 aa23.31■■□□□ 1.32
CPNE1-219ENST00000440240 PSMC5P62195 406 aa23.31■■□□□ 1.32
CPNE1-219ENST00000440240 NPY5RQ15761 445 aa23.31■■□□□ 1.32
CPNE1-219ENST00000440240 RSPH1Q8WYR4 309 aa23.31■■□□□ 1.32
CPNE1-219ENST00000440240 CEP89Q96ST8 783 aa23.31■■□□□ 1.32
CPNE1-219ENST00000440240 TCF25Q9BQ70 676 aa23.31■■□□□ 1.32
CPNE1-219ENST00000440240 JPH2Q9BR39 696 aaPredicted RBP23.31■■□□□ 1.32
CPNE1-219ENST00000440240 SPG21Q9NZD8 308 aa23.31■■□□□ 1.32
CPNE1-219ENST00000440240 MUTYHQ9UIF7 546 aa23.31■■□□□ 1.32
CPNE1-219ENST00000440240 USP15Q9Y4E8 981 aaPredicted RBP23.31■■□□□ 1.32
CPNE1-219ENST00000440240 PLXNA4Q9HCM2 1894 aa23.3■■□□□ 1.32
CPNE1-219ENST00000440240 DKC1O60832 514 aaKnown RBP eCLIP23.3■■□□□ 1.32
CPNE1-219ENST00000440240 MAFO75444 373 aaPredicted RBP23.3■■□□□ 1.32
CPNE1-219ENST00000440240 FGFR4P22455 802 aa23.3■■□□□ 1.32
CPNE1-219ENST00000440240 HOXD11P31277 338 aaPredicted RBP23.3■■□□□ 1.32
CPNE1-219ENST00000440240 DRP2Q13474 957 aa23.3■■□□□ 1.32
CPNE1-219ENST00000440240 INF2Q27J81 1249 aa23.3■■□□□ 1.32
CPNE1-219ENST00000440240 TMEM184AQ6ZMB5 413 aa23.3■■□□□ 1.32
CPNE1-219ENST00000440240 ZNF598Q86UK7 904 aaKnown RBP23.3■■□□□ 1.32
CPNE1-219ENST00000440240 FAM20AQ96MK3 541 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms