RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 CDKN1CP49918 316 aaPredicted RBP5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 BCAR1P56945 870 aa5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 IGBP1P78318 339 aa5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 MYBPC3Q14896 1274 aa5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 EIF4HQ15056 248 aaKnown RBP5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 TMEM200BQ69YZ2 307 aa5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 KIAA1841Q6NSI8 718 aa5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 BORAQ6PGQ7 559 aa5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 LARP4Q71RC2 724 aaKnown RBP eCLIP5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 REXO1L1PQ8IX06 675 aa5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 CXorf38Q8TB03 319 aa5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 FERMT2Q96AC1 680 aa5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 PUS7LQ9H0K6 701 aaKnown RBP5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 POFUT1Q9H488 388 aa5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 SLC5A4Q9NY91 659 aa5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 KCNG1Q9UIX4 513 aa5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 CDC42EP3Q9UKI2 254 aa5.06□□□□□ -1.6
TRAPPC13-204ENST00000438419 ST20-MTHFSA0A0A6YYL1 179 aa5.05□□□□□ -1.6
TRAPPC13-204ENST00000438419 B4GALT4O60513 344 aa5.05□□□□□ -1.6
TRAPPC13-204ENST00000438419 FOXD2O60548 495 aaPredicted RBP5.05□□□□□ -1.6
TRAPPC13-204ENST00000438419 PRPF6O94906 941 aaKnown RBP5.05□□□□□ -1.6
TRAPPC13-204ENST00000438419 HMGB1P09429 215 aaKnown RBP5.05□□□□□ -1.6
TRAPPC13-204ENST00000438419 ETV4P43268 484 aa5.05□□□□□ -1.6
TRAPPC13-204ENST00000438419 ADCY2Q08462 1091 aa5.05□□□□□ -1.6
TRAPPC13-204ENST00000438419 TBC1D10BQ4KMP7 808 aaPredicted RBP5.05□□□□□ -1.6
TRAPPC13-204ENST00000438419 UBXN11Q5T124 520 aa5.05□□□□□ -1.6
TRAPPC13-204ENST00000438419 TRIM68Q6AZZ1 485 aa5.05□□□□□ -1.6
TRAPPC13-204ENST00000438419 GRAMD4Q6IC98 578 aa5.05□□□□□ -1.6
TRAPPC13-204ENST00000438419 KANSL1Q7Z3B3 1105 aa5.05□□□□□ -1.6
TRAPPC13-204ENST00000438419 IFNL2Q8IZJ0 200 aa5.05□□□□□ -1.6
TRAPPC13-204ENST00000438419 ZNF496Q96IT1 587 aaPredicted RBP5.05□□□□□ -1.6
TRAPPC13-204ENST00000438419 MYL10Q9BUA6 226 aa5.05□□□□□ -1.6
TRAPPC13-204ENST00000438419 CARD11Q9BXL7 1154 aa5.05□□□□□ -1.6
TRAPPC13-204ENST00000438419 WNT8AQ9H1J5 351 aa5.05□□□□□ -1.6
TRAPPC13-204ENST00000438419 SEMA4AQ9H3S1 761 aa5.05□□□□□ -1.6
TRAPPC13-204ENST00000438419 MS4A5Q9H3V2 200 aa5.05□□□□□ -1.6
TRAPPC13-204ENST00000438419 KCMF1Q9P0J7 381 aa5.05□□□□□ -1.6
TRAPPC13-204ENST00000438419 A0A0G2JNJ9 132 aa5.04□□□□□ -1.6
TRAPPC13-204ENST00000438419 LCHNA4D1U4 455 aa5.04□□□□□ -1.6
TRAPPC13-204ENST00000438419 K7ESF4 209 aa5.04□□□□□ -1.6
TRAPPC13-204ENST00000438419 PRKD3O94806 890 aa5.04□□□□□ -1.6
TRAPPC13-204ENST00000438419 APOL3O95236 402 aa5.04□□□□□ -1.6
TRAPPC13-204ENST00000438419 PLATP00750 562 aa5.04□□□□□ -1.6
TRAPPC13-204ENST00000438419 KCNQ1P51787 676 aa5.04□□□□□ -1.6
TRAPPC13-204ENST00000438419 GUCY2FP51841 1108 aa5.04□□□□□ -1.6
TRAPPC13-204ENST00000438419 ANTXR2P58335 489 aa5.04□□□□□ -1.6
TRAPPC13-204ENST00000438419 USP10Q14694 798 aaKnown RBP5.04□□□□□ -1.6
TRAPPC13-204ENST00000438419 NOLC1Q14978 699 aaKnown RBP eCLIP5.04□□□□□ -1.6
TRAPPC13-204ENST00000438419 ZNF827Q17R98 1081 aa5.04□□□□□ -1.6
TRAPPC13-204ENST00000438419 UNQ6494/PRO21346Q6UXR6 183 aa5.04□□□□□ -1.6
TRAPPC13-204ENST00000438419 OTOP2Q7RTS6 562 aa5.04□□□□□ -1.6
TRAPPC13-204ENST00000438419 GGNQ86UU5 652 aa5.04□□□□□ -1.6
TRAPPC13-204ENST00000438419 CXorf67Q86X51 503 aaPredicted RBP5.04□□□□□ -1.6
TRAPPC13-204ENST00000438419 COG1Q8WTW3 980 aa5.04□□□□□ -1.6
TRAPPC13-204ENST00000438419 ACAP3Q96P50 834 aa5.04□□□□□ -1.6
TRAPPC13-204ENST00000438419 RBM15Q96T37 977 aaKnown RBP eCLIP5.04□□□□□ -1.6
TRAPPC13-204ENST00000438419 PTPN18Q99952 460 aa5.04□□□□□ -1.6
TRAPPC13-204ENST00000438419 SSBP3Q9BWW4 388 aaPredicted RBP5.04□□□□□ -1.6
TRAPPC13-204ENST00000438419 Q9UFV3 132 aa5.04□□□□□ -1.6
TRAPPC13-204ENST00000438419 ELL2O00472 640 aaPredicted RBP5.03□□□□□ -1.6
TRAPPC13-204ENST00000438419 CNOT4O95628 575 aaKnown RBP5.03□□□□□ -1.6
TRAPPC13-204ENST00000438419 EPHB4P54760 987 aa5.03□□□□□ -1.6
TRAPPC13-204ENST00000438419 PPP2CBP62714 309 aa5.03□□□□□ -1.6
TRAPPC13-204ENST00000438419 PPP2CAP67775 309 aa5.03□□□□□ -1.6
TRAPPC13-204ENST00000438419 TBR1Q16650 682 aa5.03□□□□□ -1.6
TRAPPC13-204ENST00000438419 RALYLQ86SE5 291 aaKnown RBP5.03□□□□□ -1.6
TRAPPC13-204ENST00000438419 ANKRD13AQ8IZ07 590 aa5.03□□□□□ -1.6
TRAPPC13-204ENST00000438419 OR5AN1Q8NGI8 311 aa5.03□□□□□ -1.6
TRAPPC13-204ENST00000438419 AHCYL2Q96HN2 611 aaKnown RBP5.03□□□□□ -1.6
TRAPPC13-204ENST00000438419 MENTQ9BUN1 341 aa5.03□□□□□ -1.6
TRAPPC13-204ENST00000438419 PITHD1Q9GZP4 211 aaPredicted RBP5.03□□□□□ -1.6
TRAPPC13-204ENST00000438419 TOPORSQ9NS56 1045 aaPredicted RBP5.03□□□□□ -1.6
TRAPPC13-204ENST00000438419 HOMER2Q9NSB8 354 aa5.03□□□□□ -1.6
TRAPPC13-204ENST00000438419 TYW1Q9NV66 732 aaKnown RBP5.03□□□□□ -1.6
TRAPPC13-204ENST00000438419 PPP4R1LQ9P1A2 415 aa5.03□□□□□ -1.6
TRAPPC13-204ENST00000438419 MAGEL2Q9UJ55 1249 aa5.03□□□□□ -1.6
TRAPPC13-204ENST00000438419 SLC4A7Q9Y6M7 1214 aa5.03□□□□□ -1.6
TRAPPC13-204ENST00000438419 LAMTOR5O43504 91 aa5.02□□□□□ -1.61
TRAPPC13-204ENST00000438419 HMGCRP04035 888 aa5.02□□□□□ -1.61
TRAPPC13-204ENST00000438419 ITGB3P05106 788 aa5.02□□□□□ -1.61
TRAPPC13-204ENST00000438419 STAT5BP51692 787 aa5.02□□□□□ -1.61
TRAPPC13-204ENST00000438419 RRADP55042 308 aa5.02□□□□□ -1.61
TRAPPC13-204ENST00000438419 MANFP55145 182 aaKnown RBP5.02□□□□□ -1.61
TRAPPC13-204ENST00000438419 PCOLCEQ15113 449 aa5.02□□□□□ -1.61
TRAPPC13-204ENST00000438419 DGKDQ16760 1214 aa5.02□□□□□ -1.61
TRAPPC13-204ENST00000438419 WASHC2AQ641Q2 1341 aa5.02□□□□□ -1.61
TRAPPC13-204ENST00000438419 BMP8AQ7Z5Y6 402 aa5.02□□□□□ -1.61
TRAPPC13-204ENST00000438419 PLEKHH3Q7Z736 793 aa5.02□□□□□ -1.61
TRAPPC13-204ENST00000438419 RPUSD2Q8IZ73 545 aaKnown RBP5.02□□□□□ -1.61
TRAPPC13-204ENST00000438419 CNTD1Q8N815 330 aa5.02□□□□□ -1.61
TRAPPC13-204ENST00000438419 RSAD2Q8WXG1 361 aa5.02□□□□□ -1.61
TRAPPC13-204ENST00000438419 BORCS6Q96GS4 357 aa5.02□□□□□ -1.61
TRAPPC13-204ENST00000438419 BDH2Q9BUT1 245 aa5.02□□□□□ -1.61
TRAPPC13-204ENST00000438419 KIAA1683Q9H0B3 1180 aa5.02□□□□□ -1.61
TRAPPC13-204ENST00000438419 MTG2Q9H4K7 406 aa5.02□□□□□ -1.61
TRAPPC13-204ENST00000438419 DENND2AQ9ULE3 1009 aa5.02□□□□□ -1.61
TRAPPC13-204ENST00000438419 SYNPO2Q9UMS6 1093 aa5.02□□□□□ -1.61
TRAPPC13-204ENST00000438419 PPP2R3BQ9Y5P8 575 aa5.02□□□□□ -1.61
TRAPPC13-204ENST00000438419 A0A0A6YYJ9 748 aa5.01□□□□□ -1.61
TRAPPC13-204ENST00000438419 OPHN1O60890 802 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 179.2 ms