RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 LGALS16A8MUM7 142 aa6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 B4DLN1 442 aa6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 F8W8V4 182 aa6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 RBAK-RBAKDNI3L0D1 243 aa6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 M0R082 166 aa6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 IPO5O00410 1097 aaKnown RBP6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 TRIM38O00635 465 aa6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 IRAK2O43187 625 aa6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 USO1O60763 962 aaKnown RBP6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 LCP1P13796 627 aa6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 AFF1P51825 1210 aaKnown RBP6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 ZNF131P52739 623 aa6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 RING1Q06587 406 aa6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 PAK1Q13153 545 aa6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 SPARCL1Q14515 664 aa6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 SNX17Q15036 470 aa6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 SURF1Q15526 300 aa6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 PKN2Q16513 984 aaKnown RBP6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 SLC35G1Q2M3R5 365 aa6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 HECTD3Q5T447 861 aa6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 CFAP58Q5T655 872 aa6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 GALNT13Q8IUC8 556 aa6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 SIRT2Q8IXJ6 389 aa6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 MRPL41Q8IXM3 137 aaKnown RBP6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 THEMISQ8N1K5 641 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 MICALL1Q8N3F8 863 aa6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 PLBD2Q8NHP8 589 aa6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 ZNF417Q8TAU3 575 aa6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 DDX54Q8TDD1 881 aaKnown RBP6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 SSH3Q8TE77 659 aa6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 HTRA1Q92743 480 aa6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 APIPQ96GX9 242 aa6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 ZNF587Q96SQ5 575 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 MCMBPQ9BTE3 642 aa6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 PLVAPQ9BX97 442 aa6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 ZMAT4Q9H898 229 aa6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 NSMCE4AQ9NXX6 385 aa6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 DACT1Q9NYF0 836 aa6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 TBC1D29Q9UFV1 150 aa6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 FEZ2Q9UHY8 353 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 EDARQ9UNE0 448 aa6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 STARD13Q9Y3M8 1113 aa6.09□□□□□ -1.43
HMGB3P10-201ENST00000434734 A0A087X0M5 115 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 A0A1B0GX30 115 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 PGPEP1LA6NFU8 196 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 DKC1O60832 514 aaKnown RBP eCLIP6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 ZBED4O75132 1171 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 HMMRO75330 724 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 THBDP07204 575 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 IDEP14735 1019 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 MAOBP27338 520 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 CDC25BP30305 580 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 ACTN2P35609 894 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 PDE3AQ14432 1141 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 POU4F3Q15319 338 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 TIGD6Q17RP2 521 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 FAM110CQ1W6H9 321 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 ZC3H12AQ5D1E8 599 aaKnown RBP6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 PRRT3Q5FWE3 981 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 NBPF12Q5TAG4 269 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 LBX2Q6XYB7 198 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 C20orf204Q6ZNR8 217 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 RASGRP2Q7LDG7 609 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 KCNK18Q7Z418 384 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 UBE3DQ7Z6J8 389 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 DAAM2Q86T65 1068 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 CCDC103Q8IW40 242 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 FIBCD1Q8N539 461 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 CCDC191Q8NCU4 936 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 AFAP1L1Q8TED9 768 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 ERCC4Q92889 916 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 MPHOSPH8Q99549 860 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 ZFYVE21Q9BQ24 234 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 DESI2Q9BSY9 194 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 FAM167BQ9BTA0 163 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 CNPPD1Q9BV87 410 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 IGFLR1Q9H665 355 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 IPPKQ9H8X2 491 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 TOMM22Q9NS69 142 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 SYNPO2Q9UMS6 1093 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 PCDHGC5Q9Y5F6 944 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 SPO11Q9Y5K1 396 aa6.08□□□□□ -1.44
HMGB3P10-201ENST00000434734 TRIM64CA6NLI5 447 aa6.07□□□□□ -1.44
HMGB3P10-201ENST00000434734 H7C1D1 291 aa6.07□□□□□ -1.44
HMGB3P10-201ENST00000434734 APOL1O14791 398 aa6.07□□□□□ -1.44
HMGB3P10-201ENST00000434734 NPC1O15118 1278 aa6.07□□□□□ -1.44
HMGB3P10-201ENST00000434734 HOXC11O43248 304 aaPredicted RBP6.07□□□□□ -1.44
HMGB3P10-201ENST00000434734 LILRB5O75023 590 aa6.07□□□□□ -1.44
HMGB3P10-201ENST00000434734 ALBP02768 609 aa6.07□□□□□ -1.44
HMGB3P10-201ENST00000434734 GSNP06396 782 aa6.07□□□□□ -1.44
HMGB3P10-201ENST00000434734 SLC3A2P08195 630 aaKnown RBP6.07□□□□□ -1.44
HMGB3P10-201ENST00000434734 CLEC2LP0C7M8 214 aa6.07□□□□□ -1.44
HMGB3P10-201ENST00000434734 XBP1P17861 261 aa6.07□□□□□ -1.44
HMGB3P10-201ENST00000434734 EDNRBP24530 442 aa6.07□□□□□ -1.44
HMGB3P10-201ENST00000434734 NTF4P34130 210 aa6.07□□□□□ -1.44
HMGB3P10-201ENST00000434734 AMPD2Q01433 879 aa6.07□□□□□ -1.44
HMGB3P10-201ENST00000434734 TBC1D8BQ0IIM8 1120 aa6.07□□□□□ -1.44
HMGB3P10-201ENST00000434734 PSMD6Q15008 389 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms