RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 ZBTB48P10074 688 aaPredicted RBP14.92□□□□□ -0.02
COL6A2-203ENST00000397763 CHN1P15882 459 aa14.92□□□□□ -0.02
COL6A2-203ENST00000397763 CDC25CP30307 473 aa14.92□□□□□ -0.02
COL6A2-203ENST00000397763 SHMT1P34896 483 aa14.92□□□□□ -0.02
COL6A2-203ENST00000397763 KCNJ1P48048 391 aa14.92□□□□□ -0.02
COL6A2-203ENST00000397763 DDR1Q08345 913 aa14.92□□□□□ -0.02
COL6A2-203ENST00000397763 PREPLQ4J6C6 727 aaPredicted RBP14.92□□□□□ -0.02
COL6A2-203ENST00000397763 MSL1Q68DK7 614 aa14.92□□□□□ -0.02
COL6A2-203ENST00000397763 HIBCHQ6NVY1 386 aaPredicted RBP14.92□□□□□ -0.02
COL6A2-203ENST00000397763 RUFY4Q6ZNE9 571 aa14.92□□□□□ -0.02
COL6A2-203ENST00000397763 FAM196AQ6ZSG2 479 aa14.92□□□□□ -0.02
COL6A2-203ENST00000397763 TAX1BP1Q86VP1 789 aa14.92□□□□□ -0.02
COL6A2-203ENST00000397763 SLC20A1Q8WUM9 679 aa14.92□□□□□ -0.02
COL6A2-203ENST00000397763 KRT35Q92764 455 aa14.92□□□□□ -0.02
COL6A2-203ENST00000397763 BTBD6Q96KE9 485 aa14.92□□□□□ -0.02
COL6A2-203ENST00000397763 KDM3AQ9Y4C1 1321 aa14.92□□□□□ -0.02
COL6A2-203ENST00000397763 TBCAO75347 108 aaKnown RBP14.91□□□□□ -0.02
COL6A2-203ENST00000397763 STAT1P42224 750 aa14.91□□□□□ -0.02
COL6A2-203ENST00000397763 MMP14P50281 582 aa14.91□□□□□ -0.02
COL6A2-203ENST00000397763 DR1Q01658 176 aa14.91□□□□□ -0.02
COL6A2-203ENST00000397763 CERS5Q8N5B7 392 aa14.91□□□□□ -0.02
COL6A2-203ENST00000397763 CCDC26Q8TAB7 109 aa14.91□□□□□ -0.02
COL6A2-203ENST00000397763 PSMD1Q99460 953 aa14.91□□□□□ -0.02
COL6A2-203ENST00000397763 KCNQ5Q9NR82 932 aa14.91□□□□□ -0.02
COL6A2-203ENST00000397763 DBR1Q9UK59 544 aaKnown RBP14.91□□□□□ -0.02
COL6A2-203ENST00000397763 COG5Q9UP83 839 aa14.91□□□□□ -0.02
COL6A2-203ENST00000397763 CLTAP09496 248 aa14.91□□□□□ -0.02
COL6A2-203ENST00000397763 PLCG2P16885 1265 aa14.91□□□□□ -0.02
COL6A2-203ENST00000397763 ZNF76P36508 570 aa14.91□□□□□ -0.02
COL6A2-203ENST00000397763 SLC29A2Q14542 456 aa14.91□□□□□ -0.02
COL6A2-203ENST00000397763 ANKRD20A8PQ5CZ79 823 aa14.91□□□□□ -0.02
COL6A2-203ENST00000397763 VPS36Q86VN1 386 aa14.91□□□□□ -0.02
COL6A2-203ENST00000397763 ATP8B4Q8TF62 1192 aa14.91□□□□□ -0.02
COL6A2-203ENST00000397763 POP1Q99575 1024 aaKnown RBP14.91□□□□□ -0.02
COL6A2-203ENST00000397763 SEMA4AQ9H3S1 761 aa14.91□□□□□ -0.02
COL6A2-203ENST00000397763 PCIF1Q9H4Z3 704 aa14.91□□□□□ -0.02
COL6A2-203ENST00000397763 TCRBV7S2A1N4TA0A589 114 aa14.9□□□□□ -0.02
COL6A2-203ENST00000397763 EIF4E1BA6NMX2 242 aaKnown RBP14.9□□□□□ -0.02
COL6A2-203ENST00000397763 EEF2P13639 858 aaKnown RBP14.9□□□□□ -0.02
COL6A2-203ENST00000397763 SCTRP47872 440 aa14.9□□□□□ -0.02
COL6A2-203ENST00000397763 PRR5LQ6MZQ0 368 aa14.9□□□□□ -0.02
COL6A2-203ENST00000397763 PHLDB2Q86SQ0 1253 aa14.9□□□□□ -0.02
COL6A2-203ENST00000397763 FAM228AQ86W67 206 aa14.9□□□□□ -0.02
COL6A2-203ENST00000397763 EPS8L3Q8TE67 593 aaKnown RBP14.9□□□□□ -0.02
COL6A2-203ENST00000397763 ELAC2Q9BQ52 826 aaKnown RBP14.9□□□□□ -0.02
COL6A2-203ENST00000397763 KCNMB3Q9NPA1 279 aa14.9□□□□□ -0.02
COL6A2-203ENST00000397763 LAMB2P55268 1798 aa14.9□□□□□ -0.02
COL6A2-203ENST00000397763 NAV1Q8NEY1 1877 aa14.9□□□□□ -0.02
COL6A2-203ENST00000397763 RREB1Q92766 1687 aa14.9□□□□□ -0.02
COL6A2-203ENST00000397763 UBAP1LF5GYI3 381 aa14.9□□□□□ -0.02
COL6A2-203ENST00000397763 MEIS2O14770 477 aa14.9□□□□□ -0.02
COL6A2-203ENST00000397763 TGFB1I1O43294 461 aa14.9□□□□□ -0.02
COL6A2-203ENST00000397763 SNHG28P0DPA3 235 aa14.9□□□□□ -0.02
COL6A2-203ENST00000397763 IFI16Q16666 785 aaKnown RBP14.9□□□□□ -0.02
COL6A2-203ENST00000397763 EDRF1Q3B7T1 1238 aa14.9□□□□□ -0.02
COL6A2-203ENST00000397763 FAM186BQ8IYM0 893 aa14.9□□□□□ -0.02
COL6A2-203ENST00000397763 TBC1D16Q8TBP0 767 aa14.9□□□□□ -0.02
COL6A2-203ENST00000397763 RNF25Q96BH1 459 aaPredicted RBP14.9□□□□□ -0.02
COL6A2-203ENST00000397763 HVCN1Q96D96 273 aa14.9□□□□□ -0.02
COL6A2-203ENST00000397763 STXBP5LQ9Y2K9 1186 aa14.9□□□□□ -0.02
COL6A2-203ENST00000397763 MMEP08473 750 aa14.9□□□□□ -0.02
COL6A2-203ENST00000397763 VIMP08670 466 aaKnown RBP14.9□□□□□ -0.02
COL6A2-203ENST00000397763 MARSP56192 900 aaKnown RBP14.9□□□□□ -0.02
COL6A2-203ENST00000397763 GKAP1Q5VSY0 366 aaPredicted RBP14.9□□□□□ -0.02
COL6A2-203ENST00000397763 LRIG3Q6UXM1 1119 aa14.9□□□□□ -0.02
COL6A2-203ENST00000397763 FRMD5Q7Z6J6 570 aa14.9□□□□□ -0.02
COL6A2-203ENST00000397763 CTNNBL1Q8WYA6 563 aaPredicted RBP14.9□□□□□ -0.02
COL6A2-203ENST00000397763 MIEF2Q96C03 454 aa14.9□□□□□ -0.02
COL6A2-203ENST00000397763 HOOK2Q96ED9 719 aa14.9□□□□□ -0.02
COL6A2-203ENST00000397763 THOC1Q96FV9 657 aaKnown RBP14.9□□□□□ -0.02
COL6A2-203ENST00000397763 ATF5Q9Y2D1 282 aaPredicted RBP14.9□□□□□ -0.02
COL6A2-203ENST00000397763 CALUO43852 315 aaPredicted RBP14.89□□□□□ -0.03
COL6A2-203ENST00000397763 CALCAP01258 141 aa14.89□□□□□ -0.03
COL6A2-203ENST00000397763 GABPAQ06546 454 aa14.89□□□□□ -0.03
COL6A2-203ENST00000397763 SPIRE1Q08AE8 756 aa14.89□□□□□ -0.03
COL6A2-203ENST00000397763 SEPT2Q15019 361 aa14.89□□□□□ -0.03
COL6A2-203ENST00000397763 ACCSLQ4AC99 568 aa14.89□□□□□ -0.03
COL6A2-203ENST00000397763 SGSM3Q96HU1 749 aa14.89□□□□□ -0.03
COL6A2-203ENST00000397763 PRMT1Q99873 361 aaKnown RBP14.89□□□□□ -0.03
COL6A2-203ENST00000397763 CDCA7Q9BWT1 371 aaPredicted RBP14.89□□□□□ -0.03
COL6A2-203ENST00000397763 DAAM1Q9Y4D1 1078 aa14.89□□□□□ -0.03
COL6A2-203ENST00000397763 SPATA31A5Q5VU36 1347 aa14.89□□□□□ -0.03
COL6A2-203ENST00000397763 SPATA31A7Q8IWB4 1347 aa14.89□□□□□ -0.03
COL6A2-203ENST00000397763 DDX39AO00148 427 aaKnown RBP14.89□□□□□ -0.03
COL6A2-203ENST00000397763 SMARCA1P28370 1054 aa14.89□□□□□ -0.03
COL6A2-203ENST00000397763 RBM5P52756 815 aaKnown RBP eCLIP14.89□□□□□ -0.03
COL6A2-203ENST00000397763 ORC2Q13416 577 aaPredicted RBP14.89□□□□□ -0.03
COL6A2-203ENST00000397763 MESDQ14696 234 aa14.89□□□□□ -0.03
COL6A2-203ENST00000397763 TRAPPC3LQ5T215 181 aa14.89□□□□□ -0.03
COL6A2-203ENST00000397763 YTHDF3Q7Z739 585 aaKnown RBP14.89□□□□□ -0.03
COL6A2-203ENST00000397763 C8orf37Q96NL8 207 aa14.89□□□□□ -0.03
COL6A2-203ENST00000397763 ANKRD63C9JTQ0 380 aa14.88□□□□□ -0.03
COL6A2-203ENST00000397763 FOXN3O00409 490 aaPredicted RBP14.88□□□□□ -0.03
COL6A2-203ENST00000397763 MSH4O15457 936 aa14.88□□□□□ -0.03
COL6A2-203ENST00000397763 CREB1P16220 341 aa14.88□□□□□ -0.03
COL6A2-203ENST00000397763 DRD4P21917 467 aa14.88□□□□□ -0.03
COL6A2-203ENST00000397763 SLFN13Q68D06 897 aa14.88□□□□□ -0.03
COL6A2-203ENST00000397763 LRRC34Q8IZ02 419 aa14.88□□□□□ -0.03
COL6A2-203ENST00000397763 ZDHHC14Q8IZN3 488 aa14.88□□□□□ -0.03
COL6A2-203ENST00000397763 ZSWIM2Q8NEG5 633 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms