RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 PADI6Q6TGC4 694 aa25.9■■□□□ 1.74
PABPN1-202ENST00000397276 CLEC4DQ8WXI8 215 aa25.9■■□□□ 1.74
PABPN1-202ENST00000397276 VIPAS39Q9H9C1 493 aa25.9■■□□□ 1.74
PABPN1-202ENST00000397276 HSD17B4P51659 736 aa25.9■■□□□ 1.74
PABPN1-202ENST00000397276 MEI1Q5TIA1 1274 aa25.9■■□□□ 1.74
PABPN1-202ENST00000397276 ICE2Q659A1 982 aa25.9■■□□□ 1.74
PABPN1-202ENST00000397276 B3GNT9Q6UX72 402 aa25.9■■□□□ 1.74
PABPN1-202ENST00000397276 KCTD17Q8N5Z5 321 aa25.9■■□□□ 1.74
PABPN1-202ENST00000397276 PCDHGC5Q9Y5F6 944 aa25.9■■□□□ 1.74
PABPN1-202ENST00000397276 PHF20L1A8MW92 1017 aa25.89■■□□□ 1.74
PABPN1-202ENST00000397276 TMCO5BA8MYB1 307 aa25.89■■□□□ 1.74
PABPN1-202ENST00000397276 EXOC3O60645 756 aa25.89■■□□□ 1.74
PABPN1-202ENST00000397276 FMO5P49326 533 aa25.89■■□□□ 1.74
PABPN1-202ENST00000397276 ZNF131P52739 623 aa25.89■■□□□ 1.74
PABPN1-202ENST00000397276 ITGB3BPQ13352 177 aaPredicted RBP25.89■■□□□ 1.74
PABPN1-202ENST00000397276 TTC19Q6DKK2 380 aaPredicted RBP25.89■■□□□ 1.74
PABPN1-202ENST00000397276 C8orf74Q6P047 294 aa25.89■■□□□ 1.74
PABPN1-202ENST00000397276 ZNF572Q7Z3I7 529 aaPredicted RBP25.89■■□□□ 1.74
PABPN1-202ENST00000397276 K7ENM7 598 aa25.89■■□□□ 1.73
PABPN1-202ENST00000397276 FLOT1O75955 427 aa25.89■■□□□ 1.73
PABPN1-202ENST00000397276 MYCLP12524 364 aaPredicted RBP25.89■■□□□ 1.73
PABPN1-202ENST00000397276 GTF2A1P52655 376 aaPredicted RBP25.89■■□□□ 1.73
PABPN1-202ENST00000397276 SND1Q7KZF4 910 aaKnown RBP eCLIP25.89■■□□□ 1.73
PABPN1-202ENST00000397276 BZW2Q9Y6E2 419 aaKnown RBP25.89■■□□□ 1.73
PABPN1-202ENST00000397276 ZHX2Q9Y6X8 837 aa25.89■■□□□ 1.73
PABPN1-202ENST00000397276 CIAPIN1Q6FI81 312 aa25.88■■□□□ 1.73
PABPN1-202ENST00000397276 TAAR1Q96RJ0 339 aa25.88■■□□□ 1.73
PABPN1-202ENST00000397276 RIT2Q99578 217 aa25.88■■□□□ 1.73
PABPN1-202ENST00000397276 TSKSQ9UJT2 592 aa25.88■■□□□ 1.73
PABPN1-202ENST00000397276 ODF2LQ9ULJ1 636 aa25.88■■□□□ 1.73
PABPN1-202ENST00000397276 ASTN2O75129 1339 aaPredicted RBP25.88■■□□□ 1.73
PABPN1-202ENST00000397276 JAM2P57087 298 aa25.88■■□□□ 1.73
PABPN1-202ENST00000397276 MRPS9P82933 396 aaKnown RBP25.88■■□□□ 1.73
PABPN1-202ENST00000397276 MAPK7Q13164 816 aa25.88■■□□□ 1.73
PABPN1-202ENST00000397276 MTMR14Q8NCE2 650 aa25.88■■□□□ 1.73
PABPN1-202ENST00000397276 U2AF1L4Q8WU68 220 aaKnown RBP25.88■■□□□ 1.73
PABPN1-202ENST00000397276 SEL1LQ9UBV2 794 aa25.88■■□□□ 1.73
PABPN1-202ENST00000397276 PPP1R1BQ9UD71 204 aaPredicted RBP25.88■■□□□ 1.73
PABPN1-202ENST00000397276 KCTD19Q17RG1 926 aaPredicted RBP25.87■■□□□ 1.73
PABPN1-202ENST00000397276 POTEAQ6S8J7 498 aa25.87■■□□□ 1.73
PABPN1-202ENST00000397276 STXBP4Q6ZWJ1 553 aa25.87■■□□□ 1.73
PABPN1-202ENST00000397276 ZSCAN5CA6NGD5 496 aaPredicted RBP25.87■■□□□ 1.73
PABPN1-202ENST00000397276 KCNK3O14649 394 aa25.87■■□□□ 1.73
PABPN1-202ENST00000397276 DHX15O43143 795 aaKnown RBP25.87■■□□□ 1.73
PABPN1-202ENST00000397276 EVI5O60447 810 aa25.87■■□□□ 1.73
PABPN1-202ENST00000397276 ITIH3Q06033 890 aa25.87■■□□□ 1.73
PABPN1-202ENST00000397276 ARHGAP44Q17R89 818 aa25.87■■□□□ 1.73
PABPN1-202ENST00000397276 TKFCQ3LXA3 575 aa25.87■■□□□ 1.73
PABPN1-202ENST00000397276 STIM2Q9P246 746 aa25.87■■□□□ 1.73
PABPN1-202ENST00000397276 DNAJC12Q9UKB3 198 aa25.87■■□□□ 1.73
PABPN1-202ENST00000397276 CCT5P48643 541 aa25.86■■□□□ 1.73
PABPN1-202ENST00000397276 MTMR1Q13613 665 aa25.86■■□□□ 1.73
PABPN1-202ENST00000397276 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.86■■□□□ 1.736e-8■■□□□ 14
PABPN1-202ENST00000397276 ESYT3A0FGR9 886 aa25.86■■□□□ 1.73
PABPN1-202ENST00000397276 DDX3XO00571 662 aaKnown RBP eCLIP25.86■■□□□ 1.735e-8■■□□□ 11.6
PABPN1-202ENST00000397276 P4HBP07237 508 aaKnown RBP25.86■■□□□ 1.73
PABPN1-202ENST00000397276 DRAP1Q14919 205 aaPredicted RBP25.86■■□□□ 1.73
PABPN1-202ENST00000397276 DNAJC21Q5F1R6 531 aaKnown RBP25.86■■□□□ 1.73
PABPN1-202ENST00000397276 PPM1EQ8WY54 764 aa25.86■■□□□ 1.73
PABPN1-202ENST00000397276 JDP2Q8WYK2 163 aa25.86■■□□□ 1.73
PABPN1-202ENST00000397276 GUCY2CP25092 1073 aa25.85■■□□□ 1.73
PABPN1-202ENST00000397276 RPS6P62753 249 aaKnown RBP25.85■■□□□ 1.73
PABPN1-202ENST00000397276 TNIP1Q15025 636 aa25.85■■□□□ 1.73
PABPN1-202ENST00000397276 SYTL5Q8TDW5 730 aaPredicted RBP25.85■■□□□ 1.73
PABPN1-202ENST00000397276 ZBED3Q96IU2 234 aaPredicted RBP25.85■■□□□ 1.73
PABPN1-202ENST00000397276 PRKCIP41743 596 aa25.85■■□□□ 1.73
PABPN1-202ENST00000397276 STAT1P42224 750 aa25.85■■□□□ 1.73
PABPN1-202ENST00000397276 DLG4P78352 724 aa25.85■■□□□ 1.73
PABPN1-202ENST00000397276 MTMR2Q13614 643 aa25.85■■□□□ 1.73
PABPN1-202ENST00000397276 SAMD7Q7Z3H4 446 aa25.85■■□□□ 1.73
PABPN1-202ENST00000397276 GLYCTKQ8IVS8 523 aa25.85■■□□□ 1.73
PABPN1-202ENST00000397276 MICALL1Q8N3F8 863 aa25.85■■□□□ 1.73
PABPN1-202ENST00000397276 AENQ8WTP8 325 aaKnown RBP25.85■■□□□ 1.73
PABPN1-202ENST00000397276 KRT12Q99456 494 aa25.85■■□□□ 1.73
PABPN1-202ENST00000397276 AGO4Q9HCK5 861 aaKnown RBP25.85■■□□□ 1.73
PABPN1-202ENST00000397276 CTDP1Q9Y5B0 961 aaPredicted RBP25.85■■□□□ 1.73
PABPN1-202ENST00000397276 LRRN2O75325 713 aa25.84■■□□□ 1.73
PABPN1-202ENST00000397276 SPP2Q13103 211 aa25.84■■□□□ 1.73
PABPN1-202ENST00000397276 RPS6KA1Q15418 735 aa25.84■■□□□ 1.73
PABPN1-202ENST00000397276 NSMFQ6X4W1 530 aa25.84■■□□□ 1.73
PABPN1-202ENST00000397276 VPS36Q86VN1 386 aa25.84■■□□□ 1.73
PABPN1-202ENST00000397276 GPRC5CQ9NQ84 441 aa25.84■■□□□ 1.73
PABPN1-202ENST00000397276 DMAC2Q9NW81 257 aa25.84■■□□□ 1.73
PABPN1-202ENST00000397276 KCND2Q9NZV8 630 aa25.84■■□□□ 1.73
PABPN1-202ENST00000397276 FZD1Q9UP38 647 aa25.84■■□□□ 1.73
PABPN1-202ENST00000397276 WDR46O15213 610 aaKnown RBP25.84■■□□□ 1.73
PABPN1-202ENST00000397276 GLI1P08151 1106 aa25.84■■□□□ 1.73
PABPN1-202ENST00000397276 MUTP22033 750 aa25.84■■□□□ 1.73
PABPN1-202ENST00000397276 ZSWIM2Q8NEG5 633 aa25.84■■□□□ 1.73
PABPN1-202ENST00000397276 TAF4BQ92750 862 aa25.84■■□□□ 1.73
PABPN1-202ENST00000397276 SEPT11Q9NVA2 429 aaKnown RBP25.84■■□□□ 1.73
PABPN1-202ENST00000397276 GTPBP10A4D1E9 387 aaKnown RBP25.84■■□□□ 1.73
PABPN1-202ENST00000397276 ATP9AO75110 1047 aa25.84■■□□□ 1.73
PABPN1-202ENST00000397276 MAP3K10Q02779 954 aa25.84■■□□□ 1.73
PABPN1-202ENST00000397276 C10orf76Q5T2E6 689 aa25.84■■□□□ 1.73
PABPN1-202ENST00000397276 IFT81Q8WYA0 676 aa25.84■■□□□ 1.73
PABPN1-202ENST00000397276 CCDC43Q96MW1 224 aaKnown RBP25.84■■□□□ 1.73
PABPN1-202ENST00000397276 TEPSINQ96N21 525 aa25.84■■□□□ 1.73
PABPN1-202ENST00000397276 RGS17Q9UGC6 210 aaPredicted RBP25.84■■□□□ 1.73
PABPN1-202ENST00000397276 F8VZ95 297 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms