RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 GTF3C3Q9Y5Q9 886 aa19.57■□□□□ 0.72
UPK3A-202ENST00000396082 ARID2Q68CP9 1835 aa19.56■□□□□ 0.72
UPK3A-202ENST00000396082 IGKV6-21A0A0C4DH24 114 aa19.56■□□□□ 0.72
UPK3A-202ENST00000396082 EIF4BP23588 611 aaKnown RBP19.56■□□□□ 0.72
UPK3A-202ENST00000396082 RFC5P40937 340 aa19.56■□□□□ 0.72
UPK3A-202ENST00000396082 BTG3Q14201 252 aaPredicted RBP19.56■□□□□ 0.72
UPK3A-202ENST00000396082 RHPN2Q8IUC4 686 aa19.56■□□□□ 0.72
UPK3A-202ENST00000396082 GCOM2Q9BZD3 368 aaPredicted RBP19.56■□□□□ 0.72
UPK3A-202ENST00000396082 BMP2KQ9NSY1 1161 aaPredicted RBP19.56■□□□□ 0.72
UPK3A-202ENST00000396082 RNF216Q9NWF9 866 aaPredicted RBP19.56■□□□□ 0.72
UPK3A-202ENST00000396082 COL6A3P12111 3177 aa19.56■□□□□ 0.72
UPK3A-202ENST00000396082 MGEA5O60502 916 aa19.55■□□□□ 0.72
UPK3A-202ENST00000396082 SLITRK3O94933 977 aa19.55■□□□□ 0.72
UPK3A-202ENST00000396082 ZSCAN20P17040 1043 aaPredicted RBP19.55■□□□□ 0.72
UPK3A-202ENST00000396082 U2AF2P26368 475 aaKnown RBP eCLIP19.55■□□□□ 0.72
UPK3A-202ENST00000396082 SARSP49591 514 aaKnown RBP19.55■□□□□ 0.72
UPK3A-202ENST00000396082 RALGAPA2Q2PPJ7 1873 aa19.55■□□□□ 0.72
UPK3A-202ENST00000396082 NLRP4Q96MN2 994 aa19.55■□□□□ 0.72
UPK3A-202ENST00000396082 PCDHB7Q9Y5E2 793 aa19.55■□□□□ 0.72
UPK3A-202ENST00000396082 MTCH2Q9Y6C9 303 aa19.55■□□□□ 0.72
UPK3A-202ENST00000396082 DGKIO75912 1065 aa19.54■□□□□ 0.72
UPK3A-202ENST00000396082 DARSP14868 501 aaKnown RBP19.54■□□□□ 0.72
UPK3A-202ENST00000396082 TECP42680 631 aa19.54■□□□□ 0.72
UPK3A-202ENST00000396082 EMC2Q15006 297 aa19.54■□□□□ 0.72
UPK3A-202ENST00000396082 SKIV2LQ15477 1246 aaKnown RBP19.54■□□□□ 0.72
UPK3A-202ENST00000396082 EPC2Q52LR7 807 aa19.54■□□□□ 0.72
UPK3A-202ENST00000396082 SLC24A5Q71RS6 500 aa19.54■□□□□ 0.72
UPK3A-202ENST00000396082 ZNF410Q86VK4 478 aa19.54■□□□□ 0.72
UPK3A-202ENST00000396082 TMEM192Q8IY95 271 aa19.54■□□□□ 0.72
UPK3A-202ENST00000396082 ZNF579Q8NAF0 562 aaKnown RBP19.54■□□□□ 0.72
UPK3A-202ENST00000396082 ERMNQ8TAM6 284 aa19.54■□□□□ 0.72
UPK3A-202ENST00000396082 HSD17B14Q9BPX1 270 aa19.54■□□□□ 0.72
UPK3A-202ENST00000396082 RGS18Q9NS28 235 aa19.54■□□□□ 0.72
UPK3A-202ENST00000396082 A0A087WZ62 844 aa19.53■□□□□ 0.72
UPK3A-202ENST00000396082 ZBTB39O15060 712 aa19.53■□□□□ 0.72
UPK3A-202ENST00000396082 LPXNO60711 386 aa19.53■□□□□ 0.72
UPK3A-202ENST00000396082 POU3F3P20264 500 aaPredicted RBP19.53■□□□□ 0.72
UPK3A-202ENST00000396082 SFPQP23246 707 aaKnown RBP eCLIP19.53■□□□□ 0.72
UPK3A-202ENST00000396082 CTNNB1P35222 781 aa19.53■□□□□ 0.72
UPK3A-202ENST00000396082 NBR1Q14596 966 aa19.53■□□□□ 0.72
UPK3A-202ENST00000396082 PAN2Q504Q3 1202 aaKnown RBP19.53■□□□□ 0.72
UPK3A-202ENST00000396082 TCP11Q8WWU5 503 aa19.53■□□□□ 0.72
UPK3A-202ENST00000396082 PSPC1Q8WXF1 523 aaKnown RBP19.53■□□□□ 0.72
UPK3A-202ENST00000396082 TMEM143Q96AN5 459 aa19.53■□□□□ 0.72
UPK3A-202ENST00000396082 MTRQ99707 1265 aa19.53■□□□□ 0.72
UPK3A-202ENST00000396082 FDXACB1Q9BRP7 624 aaPredicted RBP19.53■□□□□ 0.72
UPK3A-202ENST00000396082 INO80BQ9C086 356 aaPredicted RBP19.53■□□□□ 0.72
UPK3A-202ENST00000396082 DHX33Q9H6R0 707 aaKnown RBP19.53■□□□□ 0.72
UPK3A-202ENST00000396082 RC3H2Q9HBD1 1191 aaKnown RBP19.53■□□□□ 0.72
UPK3A-202ENST00000396082 RWDD3Q9Y3V2 267 aa19.53■□□□□ 0.72
UPK3A-202ENST00000396082 COL4A3BPQ9Y5P4 624 aa19.53■□□□□ 0.72
UPK3A-202ENST00000396082 PRRC2BQ5JSZ5 2229 aaKnown RBP19.52■□□□□ 0.72
UPK3A-202ENST00000396082 GAS2O43903 313 aaKnown RBP19.52■□□□□ 0.72
UPK3A-202ENST00000396082 CSDE1O75534 798 aaKnown RBP19.52■□□□□ 0.72
UPK3A-202ENST00000396082 LYPLA2O95372 231 aa19.52■□□□□ 0.72
UPK3A-202ENST00000396082 FGFR4P22455 802 aa19.52■□□□□ 0.72
UPK3A-202ENST00000396082 KSR1Q8IVT5 923 aa19.52■□□□□ 0.72
UPK3A-202ENST00000396082 CMTR2Q8IYT2 770 aaKnown RBP19.52■□□□□ 0.72
UPK3A-202ENST00000396082 ZNF689Q96CS4 500 aaPredicted RBP19.52■□□□□ 0.72
UPK3A-202ENST00000396082 ANKEF1Q9NU02 776 aa19.52■□□□□ 0.72
UPK3A-202ENST00000396082 CHD9Q3L8U1 2897 aa19.52■□□□□ 0.71
UPK3A-202ENST00000396082 C9IYK1 514 aa19.51■□□□□ 0.71
UPK3A-202ENST00000396082 GPM6BQ13491 265 aa19.51■□□□□ 0.71
UPK3A-202ENST00000396082 HAUS3Q68CZ6 603 aa19.51■□□□□ 0.71
UPK3A-202ENST00000396082 PIGOQ8TEQ8 1089 aa19.51■□□□□ 0.71
UPK3A-202ENST00000396082 ATP6V0A4Q9HBG4 840 aa19.51■□□□□ 0.71
UPK3A-202ENST00000396082 TUFT1Q9NNX1 390 aa19.51■□□□□ 0.71
UPK3A-202ENST00000396082 LMCD1Q9NZU5 365 aa19.51■□□□□ 0.71
UPK3A-202ENST00000396082 PCDHB6Q9Y5E3 794 aa19.51■□□□□ 0.71
UPK3A-202ENST00000396082 GATMP50440 423 aa19.5■□□□□ 0.71
UPK3A-202ENST00000396082 TOB1P50616 345 aaPredicted RBP19.5■□□□□ 0.71
UPK3A-202ENST00000396082 DSC3Q14574 896 aa19.5■□□□□ 0.71
UPK3A-202ENST00000396082 PTPROQ16827 1216 aa19.5■□□□□ 0.71
UPK3A-202ENST00000396082 LARP1BQ659C4 914 aaKnown RBP19.5■□□□□ 0.71
UPK3A-202ENST00000396082 CATSPER4Q7RTX7 472 aa19.5■□□□□ 0.71
UPK3A-202ENST00000396082 CRIPAKQ8N1N5 446 aa19.5■□□□□ 0.71
UPK3A-202ENST00000396082 PRPF31Q8WWY3 499 aaKnown RBP19.5■□□□□ 0.71
UPK3A-202ENST00000396082 RAB34Q9BZG1 259 aa19.5■□□□□ 0.71
UPK3A-202ENST00000396082 PRDM6Q9NQX0 595 aa19.5■□□□□ 0.71
UPK3A-202ENST00000396082 TMEM161AQ9NX61 479 aa19.5■□□□□ 0.71
UPK3A-202ENST00000396082 DACT1Q9NYF0 836 aa19.5■□□□□ 0.71
UPK3A-202ENST00000396082 THEGQ9P2T0 379 aa19.5■□□□□ 0.71
UPK3A-202ENST00000396082 CHD7Q9P2D1 2997 aa19.49■□□□□ 0.71
UPK3A-202ENST00000396082 A0A087WWV3 80 aa19.49■□□□□ 0.71
UPK3A-202ENST00000396082 TBKBP1A7MCY6 615 aa19.49■□□□□ 0.71
UPK3A-202ENST00000396082 H3BNC9 293 aa19.49■□□□□ 0.71
UPK3A-202ENST00000396082 MED24O75448 989 aa19.49■□□□□ 0.71
UPK3A-202ENST00000396082 DGAT1O75907 488 aa19.49■□□□□ 0.71
UPK3A-202ENST00000396082 SRGAP2CP0DJJ0 459 aa19.49■□□□□ 0.71
UPK3A-202ENST00000396082 BMPR1AP36894 532 aa19.49■□□□□ 0.71
UPK3A-202ENST00000396082 RARRES1P49788 294 aa19.49■□□□□ 0.71
UPK3A-202ENST00000396082 PTGDRQ13258 359 aa19.49■□□□□ 0.71
UPK3A-202ENST00000396082 RILPL1Q5EBL4 403 aa19.49■□□□□ 0.71
UPK3A-202ENST00000396082 SPOUT1Q5T280 376 aaKnown RBP19.49■□□□□ 0.71
UPK3A-202ENST00000396082 CATSPER3Q86XQ3 398 aa19.49■□□□□ 0.71
UPK3A-202ENST00000396082 RNF169Q8NCN4 708 aa19.49■□□□□ 0.71
UPK3A-202ENST00000396082 C11orf84Q9BUA3 381 aaPredicted RBP19.49■□□□□ 0.71
UPK3A-202ENST00000396082 POLR3CQ9BUI4 534 aaPredicted RBP19.49■□□□□ 0.71
UPK3A-202ENST00000396082 ELAC1Q9H777 363 aaKnown RBP19.49■□□□□ 0.71
UPK3A-202ENST00000396082 PIN4Q9Y237 131 aaKnown RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms