RNA–Protein interactions for RNA: ENST00000389797.7

LRCH1-202, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRCH1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-202ENST00000389797 GIT2Q14161 759 aa16.76■□□□□ 0.27
LRCH1-202ENST00000389797 APOBEC3HQ6NTF7 200 aaKnown RBP16.76■□□□□ 0.27
LRCH1-202ENST00000389797 SFR1Q86XK3 245 aa16.76■□□□□ 0.27
LRCH1-202ENST00000389797 TATDN2Q93075 761 aa16.76■□□□□ 0.27
LRCH1-202ENST00000389797 CXorf56Q9H5V9 222 aa16.76■□□□□ 0.27
LRCH1-202ENST00000389797 GCNT4Q9P109 453 aa16.76■□□□□ 0.27
LRCH1-202ENST00000389797 DNM3Q9UQ16 869 aa16.76■□□□□ 0.27
LRCH1-202ENST00000389797 ATF5Q9Y2D1 282 aaPredicted RBP16.76■□□□□ 0.27
LRCH1-202ENST00000389797 SATB1Q01826 763 aa16.75■□□□□ 0.27
LRCH1-202ENST00000389797 PPP2R5EQ16537 467 aa16.75■□□□□ 0.27
LRCH1-202ENST00000389797 ANKRD20A8PQ5CZ79 823 aa16.75■□□□□ 0.27
LRCH1-202ENST00000389797 ERMNQ8TAM6 284 aa16.75■□□□□ 0.27
LRCH1-202ENST00000389797 TACO1Q9BSH4 297 aaKnown RBP16.75■□□□□ 0.27
LRCH1-202ENST00000389797 TRIM31Q9BZY9 425 aa16.75■□□□□ 0.27
LRCH1-202ENST00000389797 ATP8A1Q9Y2Q0 1164 aa16.75■□□□□ 0.27
LRCH1-202ENST00000389797 USP17L10C9JJH3 530 aa16.75■□□□□ 0.27
LRCH1-202ENST00000389797 GFPT2O94808 682 aa16.75■□□□□ 0.27
LRCH1-202ENST00000389797 GALCP54803 685 aa16.75■□□□□ 0.27
LRCH1-202ENST00000389797 JAM2P57087 298 aa16.75■□□□□ 0.27
LRCH1-202ENST00000389797 PICALMQ13492 652 aa16.75■□□□□ 0.27
LRCH1-202ENST00000389797 SPDYCQ5MJ68 293 aa16.75■□□□□ 0.27
LRCH1-202ENST00000389797 HOOK3Q86VS8 718 aa16.75■□□□□ 0.27
LRCH1-202ENST00000389797 CCDC50Q8IVM0 306 aa16.75■□□□□ 0.27
LRCH1-202ENST00000389797 TTC7AQ9ULT0 858 aaPredicted RBP16.75■□□□□ 0.27
LRCH1-202ENST00000389797 IGKV6D-41A0A0C4DH26 115 aa16.75■□□□□ 0.27
LRCH1-202ENST00000389797 DCDC2CA8MYV0 355 aa16.75■□□□□ 0.27
LRCH1-202ENST00000389797 USP17L15C9J2P7 530 aa16.75■□□□□ 0.27
LRCH1-202ENST00000389797 USP17L13C9JLJ4 530 aa16.75■□□□□ 0.27
LRCH1-202ENST00000389797 USP17L11C9JVI0 530 aa16.75■□□□□ 0.27
LRCH1-202ENST00000389797 USP17L18D6R9N7 530 aa16.75■□□□□ 0.27
LRCH1-202ENST00000389797 USP17L22D6RA61 530 aa16.75■□□□□ 0.27
LRCH1-202ENST00000389797 USP17L17D6RBQ6 530 aa16.75■□□□□ 0.27
LRCH1-202ENST00000389797 USP17L19D6RCP7 530 aa16.75■□□□□ 0.27
LRCH1-202ENST00000389797 USP17L20D6RJB6 530 aa16.75■□□□□ 0.27
LRCH1-202ENST00000389797 H0YIN7 160 aa16.75■□□□□ 0.27
LRCH1-202ENST00000389797 DNM1LO00429 736 aa16.75■□□□□ 0.27
LRCH1-202ENST00000389797 BACH1O14867 736 aa16.75■□□□□ 0.27
LRCH1-202ENST00000389797 NR3C1P04150 777 aa16.75■□□□□ 0.27
LRCH1-202ENST00000389797 STAT1P42224 750 aa16.75■□□□□ 0.27
LRCH1-202ENST00000389797 USP17L24Q0WX57 530 aa16.75■□□□□ 0.27
LRCH1-202ENST00000389797 PABPC4Q13310 644 aaKnown RBP eCLIP16.75■□□□□ 0.27
LRCH1-202ENST00000389797 USP17L6PQ6QN14 398 aa16.75■□□□□ 0.27
LRCH1-202ENST00000389797 SIX2Q9NPC8 291 aa16.75■□□□□ 0.27
LRCH1-202ENST00000389797 TYW1Q9NV66 732 aaKnown RBP16.75■□□□□ 0.27
LRCH1-202ENST00000389797 DIS3Q9Y2L1 958 aaKnown RBP16.75■□□□□ 0.27
LRCH1-202ENST00000389797 PCDHAC2Q9Y5I4 1007 aa16.75■□□□□ 0.27
LRCH1-202ENST00000389797 CDC42EP5Q6NZY7 148 aa16.74■□□□□ 0.27
LRCH1-202ENST00000389797 EPM2AIP1Q7L775 607 aaPredicted RBP16.74■□□□□ 0.27
LRCH1-202ENST00000389797 CATSPER3Q86XQ3 398 aa16.74■□□□□ 0.27
LRCH1-202ENST00000389797 NAP1L3Q99457 506 aaPredicted RBP16.74■□□□□ 0.27
LRCH1-202ENST00000389797 REEP2Q9BRK0 252 aa16.74■□□□□ 0.27
LRCH1-202ENST00000389797 SLC16A3O15427 465 aaKnown RBP16.74■□□□□ 0.27
LRCH1-202ENST00000389797 PPFIA2O75334 1257 aa16.74■□□□□ 0.27
LRCH1-202ENST00000389797 HOXD13P35453 343 aa16.74■□□□□ 0.27
LRCH1-202ENST00000389797 PRPF4BQ13523 1007 aaKnown RBP16.74■□□□□ 0.27
LRCH1-202ENST00000389797 SNCBQ16143 134 aa16.74■□□□□ 0.27
LRCH1-202ENST00000389797 CYB5D1Q6P9G0 228 aa16.74■□□□□ 0.27
LRCH1-202ENST00000389797 HHIPL2Q6UWX4 724 aa16.74■□□□□ 0.27
LRCH1-202ENST00000389797 PODNQ7Z5L7 613 aa16.74■□□□□ 0.27
LRCH1-202ENST00000389797 FUKQ8N0W3 1084 aa16.74■□□□□ 0.27
LRCH1-202ENST00000389797 SLC35C1Q96A29 364 aa16.74■□□□□ 0.27
LRCH1-202ENST00000389797 SGSM3Q96HU1 749 aa16.74■□□□□ 0.27
LRCH1-202ENST00000389797 GOLGA6L10A0A0M3HER8 536 aa16.73■□□□□ 0.27
LRCH1-202ENST00000389797 GTPBP10A4D1E9 387 aaKnown RBP16.73■□□□□ 0.27
LRCH1-202ENST00000389797 PHF20L1A8MW92 1017 aa16.73■□□□□ 0.27
LRCH1-202ENST00000389797 POU5F1Q01860 360 aaKnown RBP16.73■□□□□ 0.27
LRCH1-202ENST00000389797 PARP9Q8IXQ6 854 aa16.73■□□□□ 0.27
LRCH1-202ENST00000389797 SYT2Q8N9I0 419 aaPredicted RBP16.73■□□□□ 0.27
LRCH1-202ENST00000389797 TRIM51Q9BSJ1 452 aa16.73■□□□□ 0.27
LRCH1-202ENST00000389797 ANO3Q9BYT9 981 aa16.73■□□□□ 0.27
LRCH1-202ENST00000389797 CYP3A7-CYP3A51PA0A087WV96 503 aa16.73■□□□□ 0.27
LRCH1-202ENST00000389797 BUB1BO60566 1050 aaPredicted RBP16.73■□□□□ 0.27
LRCH1-202ENST00000389797 LMNB1P20700 586 aa16.73■□□□□ 0.27
LRCH1-202ENST00000389797 CYP3A7P24462 503 aa16.73■□□□□ 0.27
LRCH1-202ENST00000389797 LACTB2Q53H82 288 aaPredicted RBP16.73■□□□□ 0.27
LRCH1-202ENST00000389797 GJB7Q6PEY0 223 aa16.73■□□□□ 0.27
LRCH1-202ENST00000389797 TAX1BP1Q86VP1 789 aa16.73■□□□□ 0.27
LRCH1-202ENST00000389797 RFFLQ8WZ73 363 aa16.73■□□□□ 0.27
LRCH1-202ENST00000389797 CENPTQ96BT3 561 aa16.73■□□□□ 0.27
LRCH1-202ENST00000389797 TLCD1Q96CP7 247 aa16.73■□□□□ 0.27
LRCH1-202ENST00000389797 CHMP6Q96FZ7 201 aa16.73■□□□□ 0.27
LRCH1-202ENST00000389797 XPO6Q96QU8 1125 aaKnown RBP16.73■□□□□ 0.27
LRCH1-202ENST00000389797 AJAP1Q9UKB5 411 aaPredicted RBP16.73■□□□□ 0.27
LRCH1-202ENST00000389797 PCDHB13Q9Y5F0 798 aa16.73■□□□□ 0.27
LRCH1-202ENST00000389797 MEIS1O00470 390 aa16.73■□□□□ 0.27
LRCH1-202ENST00000389797 SCTRP47872 440 aa16.73■□□□□ 0.27
LRCH1-202ENST00000389797 CASP4P49662 377 aa16.73■□□□□ 0.27
LRCH1-202ENST00000389797 PTENP60484 403 aa16.73■□□□□ 0.27
LRCH1-202ENST00000389797 PSMC6P62333 389 aa16.73■□□□□ 0.27
LRCH1-202ENST00000389797 NEDD9Q14511 834 aa16.73■□□□□ 0.27
LRCH1-202ENST00000389797 KCTD19Q17RG1 926 aaPredicted RBP16.73■□□□□ 0.27
LRCH1-202ENST00000389797 DACT2Q5SW24 774 aa16.73■□□□□ 0.27
LRCH1-202ENST00000389797 KCTD1Q719H9 257 aa16.73■□□□□ 0.27
LRCH1-202ENST00000389797 GIMAP7Q8NHV1 300 aa16.73■□□□□ 0.27
LRCH1-202ENST00000389797 CTNNBL1Q8WYA6 563 aaPredicted RBP16.73■□□□□ 0.27
LRCH1-202ENST00000389797 USP40Q9NVE5 1235 aa16.73■□□□□ 0.27
LRCH1-202ENST00000389797 EVI5O60447 810 aa16.72■□□□□ 0.27
LRCH1-202ENST00000389797 DRD4P21917 467 aa16.72■□□□□ 0.27
LRCH1-202ENST00000389797 NFIAQ12857 509 aa16.72■□□□□ 0.27
LRCH1-202ENST00000389797 BYSLQ13895 437 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms