RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 ADSSL1Q8N142 457 aa14.17□□□□□ -0.14
PTPRN2-202ENST00000389416 MOV10L1Q9BXT6 1211 aaKnown RBP14.17□□□□□ -0.14
PTPRN2-202ENST00000389416 FAM217BQ9NTX9 383 aaPredicted RBP14.17□□□□□ -0.14
PTPRN2-202ENST00000389416 RBAKQ9NYW8 714 aaPredicted RBP14.17□□□□□ -0.14
PTPRN2-202ENST00000389416 LTN1O94822 1766 aa14.16□□□□□ -0.14
PTPRN2-202ENST00000389416 TTC26A0AVF1 554 aa14.16□□□□□ -0.14
PTPRN2-202ENST00000389416 FXR2P51116 673 aaKnown RBP eCLIP14.16□□□□□ -0.14
PTPRN2-202ENST00000389416 DNAJC24Q6P3W2 148 aa14.16□□□□□ -0.14
PTPRN2-202ENST00000389416 FKBP1AP62942 108 aaKnown RBP14.16□□□□□ -0.14
PTPRN2-202ENST00000389416 TMEM62Q0P6H9 643 aa14.16□□□□□ -0.14
PTPRN2-202ENST00000389416 TMEM270Q6UE05 265 aa14.16□□□□□ -0.14
PTPRN2-202ENST00000389416 LRRC71Q8N4P6 559 aa14.16□□□□□ -0.14
PTPRN2-202ENST00000389416 NSMCE1Q8WV22 266 aa14.16□□□□□ -0.14
PTPRN2-202ENST00000389416 RPGRIP1Q96KN7 1286 aa14.16□□□□□ -0.14
PTPRN2-202ENST00000389416 NUDT12Q9BQG2 462 aa14.16□□□□□ -0.14
PTPRN2-202ENST00000389416 KIAA1683Q9H0B3 1180 aa14.16□□□□□ -0.14
PTPRN2-202ENST00000389416 ZNF148Q9UQR1 794 aa14.16□□□□□ -0.14
PTPRN2-202ENST00000389416 ADAMTSL3P82987 1691 aa14.16□□□□□ -0.14
PTPRN2-202ENST00000389416 RHOBTB3O94955 611 aa14.16□□□□□ -0.14
PTPRN2-202ENST00000389416 GUCY2FP51841 1108 aa14.16□□□□□ -0.14
PTPRN2-202ENST00000389416 ZNF699Q32M78 642 aa14.16□□□□□ -0.14
PTPRN2-202ENST00000389416 CCDC144BQ3MJ40 725 aa14.16□□□□□ -0.14
PTPRN2-202ENST00000389416 PCDHA13Q9Y5I0 950 aa14.16□□□□□ -0.14
PTPRN2-202ENST00000389416 EMSYQ7Z589 1322 aa14.16□□□□□ -0.14
PTPRN2-202ENST00000389416 CHD2O14647 1828 aaKnown RBP14.15□□□□□ -0.14
PTPRN2-202ENST00000389416 CTSHP09668 335 aa14.15□□□□□ -0.14
PTPRN2-202ENST00000389416 GPRC5DQ9NZD1 345 aa14.15□□□□□ -0.14
PTPRN2-202ENST00000389416 PPP2R3BQ9Y5P8 575 aa14.15□□□□□ -0.14
PTPRN2-202ENST00000389416 PDXKO00764 312 aa14.15□□□□□ -0.14
PTPRN2-202ENST00000389416 CYTH3O43739 400 aa14.15□□□□□ -0.14
PTPRN2-202ENST00000389416 ACOT2P49753 483 aa14.15□□□□□ -0.14
PTPRN2-202ENST00000389416 TNFAIP2Q03169 654 aa14.15□□□□□ -0.14
PTPRN2-202ENST00000389416 CLUL1Q15846 466 aa14.15□□□□□ -0.14
PTPRN2-202ENST00000389416 KSR1Q8IVT5 923 aa14.15□□□□□ -0.14
PTPRN2-202ENST00000389416 ARFGAP2Q8N6H7 521 aa14.15□□□□□ -0.14
PTPRN2-202ENST00000389416 ABHD10Q9NUJ1 306 aa14.15□□□□□ -0.14
PTPRN2-202ENST00000389416 ODF2LQ9ULJ1 636 aa14.15□□□□□ -0.14
PTPRN2-202ENST00000389416 MYBP10242 640 aa14.15□□□□□ -0.14
PTPRN2-202ENST00000389416 EARS2Q5JPH6 523 aaKnown RBP14.15□□□□□ -0.14
PTPRN2-202ENST00000389416 FKBP1CQ5VVH2 108 aa14.15□□□□□ -0.14
PTPRN2-202ENST00000389416 PASD1Q8IV76 773 aa14.15□□□□□ -0.14
PTPRN2-202ENST00000389416 NME8Q8N427 588 aa14.15□□□□□ -0.14
PTPRN2-202ENST00000389416 ENGASEQ8NFI3 743 aa14.15□□□□□ -0.14
PTPRN2-202ENST00000389416 CDC23Q9UJX2 597 aa14.15□□□□□ -0.14
PTPRN2-202ENST00000389416 MED7O43513 233 aa14.15□□□□□ -0.14
PTPRN2-202ENST00000389416 PRKCBP05771 671 aa14.15□□□□□ -0.14
PTPRN2-202ENST00000389416 COL9A3Q14050 684 aaPredicted RBP14.15□□□□□ -0.14
PTPRN2-202ENST00000389416 GNASQ5JWF2 1037 aa14.15□□□□□ -0.14
PTPRN2-202ENST00000389416 KRT39Q6A163 491 aa14.15□□□□□ -0.14
PTPRN2-202ENST00000389416 SMAP1Q8IYB5 467 aaPredicted RBP14.15□□□□□ -0.14
PTPRN2-202ENST00000389416 RAB17Q9H0T7 212 aa14.15□□□□□ -0.14
PTPRN2-202ENST00000389416 TUBE1Q9UJT0 475 aa14.15□□□□□ -0.14
PTPRN2-202ENST00000389416 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.14□□□□□ -0.15
PTPRN2-202ENST00000389416 SREBF1P36956 1147 aa14.14□□□□□ -0.15
PTPRN2-202ENST00000389416 ADCY8P40145 1251 aa14.14□□□□□ -0.15
PTPRN2-202ENST00000389416 GPC3P51654 580 aa14.14□□□□□ -0.15
PTPRN2-202ENST00000389416 GTF3C2Q8WUA4 911 aaPredicted RBP14.14□□□□□ -0.15
PTPRN2-202ENST00000389416 TRIM11Q96F44 468 aa14.14□□□□□ -0.15
PTPRN2-202ENST00000389416 PPANQ9NQ55 473 aaKnown RBP14.14□□□□□ -0.15
PTPRN2-202ENST00000389416 CEP72Q9P209 647 aa14.14□□□□□ -0.15
PTPRN2-202ENST00000389416 PHLPP1O60346 1717 aa14.14□□□□□ -0.15
PTPRN2-202ENST00000389416 ACTR2P61160 394 aa14.14□□□□□ -0.15
PTPRN2-202ENST00000389416 XRRA1Q6P2D8 792 aa14.14□□□□□ -0.15
PTPRN2-202ENST00000389416 CYP2W1Q8TAV3 490 aa14.14□□□□□ -0.15
PTPRN2-202ENST00000389416 CPA4Q9UI42 421 aa14.14□□□□□ -0.15
PTPRN2-202ENST00000389416 EFNA5P52803 228 aa14.14□□□□□ -0.15
PTPRN2-202ENST00000389416 MRPS9P82933 396 aaKnown RBP14.14□□□□□ -0.15
PTPRN2-202ENST00000389416 DRAP1Q14919 205 aaPredicted RBP14.14□□□□□ -0.15
PTPRN2-202ENST00000389416 EMC2Q15006 297 aa14.14□□□□□ -0.15
PTPRN2-202ENST00000389416 IQCB1Q15051 598 aa14.14□□□□□ -0.15
PTPRN2-202ENST00000389416 GPD1LQ8N335 351 aa14.14□□□□□ -0.15
PTPRN2-202ENST00000389416 SREK1Q8WXA9 508 aaKnown RBP14.14□□□□□ -0.15
PTPRN2-202ENST00000389416 MAGOHBQ96A72 148 aaKnown RBP14.14□□□□□ -0.15
PTPRN2-202ENST00000389416 PDGFDQ9GZP0 370 aaPredicted RBP14.14□□□□□ -0.15
PTPRN2-202ENST00000389416 UNC45AQ9H3U1 944 aa14.14□□□□□ -0.15
PTPRN2-202ENST00000389416 AKAP12Q02952 1782 aa14.14□□□□□ -0.15
PTPRN2-202ENST00000389416 A6NJR5 290 aa14.14□□□□□ -0.15
PTPRN2-202ENST00000389416 CAPN2P17655 700 aa14.14□□□□□ -0.15
PTPRN2-202ENST00000389416 ZNF746Q6NUN9 644 aaPredicted RBP14.14□□□□□ -0.15
PTPRN2-202ENST00000389416 FBXL16Q8N461 479 aa14.14□□□□□ -0.15
PTPRN2-202ENST00000389416 SYTL5Q8TDW5 730 aaPredicted RBP14.14□□□□□ -0.15
PTPRN2-202ENST00000389416 MRIQ9BWK5 157 aa14.14□□□□□ -0.15
PTPRN2-202ENST00000389416 MRPL47Q9HD33 250 aaKnown RBP14.14□□□□□ -0.15
PTPRN2-202ENST00000389416 CIITAP33076 1130 aa14.13□□□□□ -0.15
PTPRN2-202ENST00000389416 HERVK_113P62684 666 aa14.13□□□□□ -0.15
PTPRN2-202ENST00000389416 MAP7D3Q8IWC1 876 aa14.13□□□□□ -0.15
PTPRN2-202ENST00000389416 MED24O75448 989 aa14.13□□□□□ -0.15
PTPRN2-202ENST00000389416 ERICH1Q86X53 443 aa14.13□□□□□ -0.15
PTPRN2-202ENST00000389416 GPRASP2Q96D09 838 aa14.13□□□□□ -0.15
PTPRN2-202ENST00000389416 PDCD2LQ9BRP1 358 aa14.13□□□□□ -0.15
PTPRN2-202ENST00000389416 PIN4Q9Y237 131 aaKnown RBP14.13□□□□□ -0.15
PTPRN2-202ENST00000389416 TBC1D8O95759 1140 aa14.13□□□□□ -0.15
PTPRN2-202ENST00000389416 TCF7P36402 384 aaPredicted RBP14.13□□□□□ -0.15
PTPRN2-202ENST00000389416 SEMA3FQ13275 785 aa14.13□□□□□ -0.15
PTPRN2-202ENST00000389416 AMIGO3Q86WK7 504 aa14.13□□□□□ -0.15
PTPRN2-202ENST00000389416 CALN1Q9BXU9 219 aa14.13□□□□□ -0.15
PTPRN2-202ENST00000389416 SPATC1LQ9H0A9 340 aa14.13□□□□□ -0.15
PTPRN2-202ENST00000389416 H7C0C1 242 aa14.12□□□□□ -0.15
PTPRN2-202ENST00000389416 ATP5OP48047 213 aa14.12□□□□□ -0.15
PTPRN2-202ENST00000389416 CAPN12Q6ZSI9 719 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms