RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 ORC3Q9UBD5 711 aaPredicted RBP16.01■□□□□ 0.15
NELFE-201ENST00000375425 LOXHD1Q8IVV2 1947 aa16.01■□□□□ 0.15
NELFE-201ENST00000375425 RALGAPA2Q2PPJ7 1873 aa16■□□□□ 0.15
NELFE-201ENST00000375425 DDX11L8A8MPP1 907 aa16■□□□□ 0.15
NELFE-201ENST00000375425 EML1O00423 815 aa16■□□□□ 0.15
NELFE-201ENST00000375425 CCNT1O60563 726 aaKnown RBP16■□□□□ 0.15
NELFE-201ENST00000375425 DARSP14868 501 aaKnown RBP16■□□□□ 0.15
NELFE-201ENST00000375425 COL9A1P20849 921 aa16■□□□□ 0.15
NELFE-201ENST00000375425 IRS1P35568 1242 aa16■□□□□ 0.15
NELFE-201ENST00000375425 PPP4R3AQ6IN85 833 aa16■□□□□ 0.15
NELFE-201ENST00000375425 PIK3AP1Q6ZUJ8 805 aa16■□□□□ 0.15
NELFE-201ENST00000375425 GJD3Q8N144 294 aa16■□□□□ 0.15
NELFE-201ENST00000375425 NECAB1Q8N987 351 aa16■□□□□ 0.15
NELFE-201ENST00000375425 NLRP7Q8WX94 980 aa16■□□□□ 0.15
NELFE-201ENST00000375425 KHSRPQ92945 711 aaKnown RBP eCLIP16■□□□□ 0.15
NELFE-201ENST00000375425 FAM20AQ96MK3 541 aa16■□□□□ 0.15
NELFE-201ENST00000375425 SCLT1Q96NL6 688 aa16■□□□□ 0.15
NELFE-201ENST00000375425 C1QTNF1Q9BXJ1 281 aa16■□□□□ 0.15
NELFE-201ENST00000375425 KCNMB3Q9NPA1 279 aa16■□□□□ 0.15
NELFE-201ENST00000375425 PCDHB12Q9Y5F1 795 aa16■□□□□ 0.15
NELFE-201ENST00000375425 IGKV6-21A0A0C4DH24 114 aa15.99■□□□□ 0.15
NELFE-201ENST00000375425 CSDE1O75534 798 aaKnown RBP15.99■□□□□ 0.15
NELFE-201ENST00000375425 FDPSP14324 419 aaKnown RBP15.99■□□□□ 0.15
NELFE-201ENST00000375425 FGFR4P22455 802 aa15.99■□□□□ 0.15
NELFE-201ENST00000375425 DNM2P50570 870 aa15.99■□□□□ 0.15
NELFE-201ENST00000375425 PSMC5P62195 406 aa15.99■□□□□ 0.15
NELFE-201ENST00000375425 CDC42EP1Q00587 391 aa15.99■□□□□ 0.15
NELFE-201ENST00000375425 DLX2Q07687 328 aaPredicted RBP15.99■□□□□ 0.15
NELFE-201ENST00000375425 ME3Q16798 604 aa15.99■□□□□ 0.15
NELFE-201ENST00000375425 EARS2Q5JPH6 523 aaKnown RBP15.99■□□□□ 0.15
NELFE-201ENST00000375425 ANO5Q75V66 913 aa15.99■□□□□ 0.15
NELFE-201ENST00000375425 WASF1Q92558 559 aa15.99■□□□□ 0.15
NELFE-201ENST00000375425 AAASQ9NRG9 546 aa15.99■□□□□ 0.15
NELFE-201ENST00000375425 HCSTQ9UBK5 93 aa15.99■□□□□ 0.15
NELFE-201ENST00000375425 GCFC2P16383 781 aaKnown RBP15.98■□□□□ 0.15
NELFE-201ENST00000375425 PPP2R5CQ13362 524 aa15.98■□□□□ 0.15
NELFE-201ENST00000375425 ADAM15Q13444 863 aa15.98■□□□□ 0.15
NELFE-201ENST00000375425 HAS1Q92839 578 aa15.98■□□□□ 0.15
NELFE-201ENST00000375425 PPP2R3CQ969Q6 453 aa15.98■□□□□ 0.15
NELFE-201ENST00000375425 CWH43Q9H720 699 aa15.98■□□□□ 0.15
NELFE-201ENST00000375425 SUCLA2Q9P2R7 463 aaPredicted RBP15.98■□□□□ 0.15
NELFE-201ENST00000375425 VAV3Q9UKW4 847 aa15.98■□□□□ 0.15
NELFE-201ENST00000375425 A0A087WZ62 844 aa15.97■□□□□ 0.15
NELFE-201ENST00000375425 LINC01565O15544 149 aa15.97■□□□□ 0.15
NELFE-201ENST00000375425 MARCH6O60337 910 aa15.97■□□□□ 0.15
NELFE-201ENST00000375425 MAFO75444 373 aaPredicted RBP15.97■□□□□ 0.15
NELFE-201ENST00000375425 LARGE1O95461 756 aa15.97■□□□□ 0.15
NELFE-201ENST00000375425 SSTR3P32745 418 aaPredicted RBP15.97■□□□□ 0.15
NELFE-201ENST00000375425 QARSP47897 775 aaKnown RBP15.97■□□□□ 0.15
NELFE-201ENST00000375425 CLUL1Q15846 466 aa15.97■□□□□ 0.15
NELFE-201ENST00000375425 LRRC55Q6ZSA7 311 aa15.97■□□□□ 0.15
NELFE-201ENST00000375425 ADGRD2Q7Z7M1 963 aa15.97■□□□□ 0.15
NELFE-201ENST00000375425 ECHDC2Q86YB7 292 aa15.97■□□□□ 0.15
NELFE-201ENST00000375425 COLGALT1Q8NBJ5 622 aa15.97■□□□□ 0.15
NELFE-201ENST00000375425 MICAL1Q8TDZ2 1067 aa15.97■□□□□ 0.15
NELFE-201ENST00000375425 CASD1Q96PB1 797 aa15.97■□□□□ 0.15
NELFE-201ENST00000375425 FDXACB1Q9BRP7 624 aaPredicted RBP15.97■□□□□ 0.15
NELFE-201ENST00000375425 GCOM2Q9BZD3 368 aaPredicted RBP15.97■□□□□ 0.15
NELFE-201ENST00000375425 TMEM117Q9H0C3 514 aa15.97■□□□□ 0.15
NELFE-201ENST00000375425 FAM50BQ9Y247 325 aa15.97■□□□□ 0.15
NELFE-201ENST00000375425 A0A0U1RQF3 1178 aa15.96■□□□□ 0.15
NELFE-201ENST00000375425 TBX3O15119 743 aa15.96■□□□□ 0.15
NELFE-201ENST00000375425 HOXA2O43364 376 aa15.96■□□□□ 0.15
NELFE-201ENST00000375425 FGF18O76093 207 aa15.96■□□□□ 0.15
NELFE-201ENST00000375425 P4HBP07237 508 aaKnown RBP15.96■□□□□ 0.15
NELFE-201ENST00000375425 KRT2P35908 639 aa15.96■□□□□ 0.15
NELFE-201ENST00000375425 NRIP1P48552 1158 aa15.96■□□□□ 0.15
NELFE-201ENST00000375425 NEK4P51957 841 aa15.96■□□□□ 0.15
NELFE-201ENST00000375425 NPEPPSP55786 919 aa15.96■□□□□ 0.15
NELFE-201ENST00000375425 UBE3AQ05086 875 aa15.96■□□□□ 0.15
NELFE-201ENST00000375425 NR5A1Q13285 461 aa15.96■□□□□ 0.15
NELFE-201ENST00000375425 PLA2G4FQ68DD2 849 aa15.96■□□□□ 0.15
NELFE-201ENST00000375425 RBM23Q86U06 439 aaKnown RBP15.96■□□□□ 0.15
NELFE-201ENST00000375425 POTEDQ86YR6 584 aa15.96■□□□□ 0.15
NELFE-201ENST00000375425 RHPN2Q8IUC4 686 aa15.96■□□□□ 0.15
NELFE-201ENST00000375425 THNSL1Q8IYQ7 743 aa15.96■□□□□ 0.15
NELFE-201ENST00000375425 RNF169Q8NCN4 708 aa15.96■□□□□ 0.15
NELFE-201ENST00000375425 GTF3C6Q969F1 213 aa15.96■□□□□ 0.15
NELFE-201ENST00000375425 NAP1L4Q99733 375 aaKnown RBP15.96■□□□□ 0.15
NELFE-201ENST00000375425 CYP26B1Q9NR63 512 aa15.96■□□□□ 0.15
NELFE-201ENST00000375425 RNF19AQ9NV58 838 aa15.96■□□□□ 0.15
NELFE-201ENST00000375425 RAPGEFL1Q9UHV5 662 aa15.96■□□□□ 0.15
NELFE-201ENST00000375425 PCDHGC5Q9Y5F6 944 aa15.96■□□□□ 0.15
NELFE-201ENST00000375425 FAM205CA6NFA0 338 aa15.95■□□□□ 0.14
NELFE-201ENST00000375425 PI4K2BG5E9Z4 385 aa15.95■□□□□ 0.14
NELFE-201ENST00000375425 DKC1O60832 514 aaKnown RBP eCLIP15.95■□□□□ 0.14
NELFE-201ENST00000375425 TBX10O75333 385 aa15.95■□□□□ 0.14
NELFE-201ENST00000375425 SEC24BO95487 1268 aa15.95■□□□□ 0.14
NELFE-201ENST00000375425 EOMESO95936 686 aa15.95■□□□□ 0.14
NELFE-201ENST00000375425 EPHA7Q15375 998 aa15.95■□□□□ 0.14
NELFE-201ENST00000375425 CSPP1Q1MSJ5 1256 aa15.95■□□□□ 0.14
NELFE-201ENST00000375425 KSR1Q8IVT5 923 aa15.95■□□□□ 0.14
NELFE-201ENST00000375425 ABI1Q8IZP0 508 aa15.95■□□□□ 0.14
NELFE-201ENST00000375425 EFHBQ8N7U6 833 aa15.95■□□□□ 0.14
NELFE-201ENST00000375425 ZNF579Q8NAF0 562 aaKnown RBP15.95■□□□□ 0.14
NELFE-201ENST00000375425 NSUN7Q8NE18 718 aaKnown RBP15.95■□□□□ 0.14
NELFE-201ENST00000375425 JPH2Q9BR39 696 aaPredicted RBP15.95■□□□□ 0.14
NELFE-201ENST00000375425 TLR9Q9NR96 1032 aa15.95■□□□□ 0.14
NELFE-201ENST00000375425 CHST12Q9NRB3 414 aa15.95■□□□□ 0.14
NELFE-201ENST00000375425 DACT1Q9NYF0 836 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms