RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 FRMD4BQ9Y2L6 1034 aa17.46■□□□□ 0.39
CNKSR1-202ENST00000374253 HYOU1Q9Y4L1 999 aa17.46■□□□□ 0.39
CNKSR1-202ENST00000374253 ZNF541Q9H0D2 1346 aa17.46■□□□□ 0.39
CNKSR1-202ENST00000374253 LRRIQ3A6PVS8 624 aaPredicted RBP17.46■□□□□ 0.38
CNKSR1-202ENST00000374253 TMCO5BA8MYB1 307 aa17.46■□□□□ 0.38
CNKSR1-202ENST00000374253 MAP2K7O14733 419 aa17.46■□□□□ 0.38
CNKSR1-202ENST00000374253 BACH1O14867 736 aa17.46■□□□□ 0.38
CNKSR1-202ENST00000374253 CCNE2O96020 404 aa17.46■□□□□ 0.38
CNKSR1-202ENST00000374253 TNNT3P45378 269 aaPredicted RBP17.46■□□□□ 0.38
CNKSR1-202ENST00000374253 FMO5P49326 533 aa17.46■□□□□ 0.38
CNKSR1-202ENST00000374253 CCDC181Q5TID7 509 aa17.46■□□□□ 0.38
CNKSR1-202ENST00000374253 HNRNPLLQ8WVV9 542 aaKnown RBP17.46■□□□□ 0.38
CNKSR1-202ENST00000374253 LRRC1Q9BTT6 524 aa17.46■□□□□ 0.38
CNKSR1-202ENST00000374253 RNF146Q9NTX7 359 aa17.46■□□□□ 0.38
CNKSR1-202ENST00000374253 TCEAL9Q9UHQ7 104 aa17.46■□□□□ 0.38
CNKSR1-202ENST00000374253 ATP8B1O43520 1251 aa17.45■□□□□ 0.38
CNKSR1-202ENST00000374253 ZBED4O75132 1171 aa17.45■□□□□ 0.38
CNKSR1-202ENST00000374253 GUCY2CP25092 1073 aa17.45■□□□□ 0.38
CNKSR1-202ENST00000374253 YWHABP31946 246 aaKnown RBP17.45■□□□□ 0.38
CNKSR1-202ENST00000374253 QARSP47897 775 aaKnown RBP17.45■□□□□ 0.38
CNKSR1-202ENST00000374253 CASP8Q14790 479 aa17.45■□□□□ 0.38
CNKSR1-202ENST00000374253 NAB2Q15742 525 aa17.45■□□□□ 0.38
CNKSR1-202ENST00000374253 HDXQ7Z353 690 aa17.45■□□□□ 0.38
CNKSR1-202ENST00000374253 SPATA4Q8NEY3 305 aa17.45■□□□□ 0.38
CNKSR1-202ENST00000374253 PDCD2LQ9BRP1 358 aa17.45■□□□□ 0.38
CNKSR1-202ENST00000374253 CBWD1Q9BRT8 395 aa17.45■□□□□ 0.38
CNKSR1-202ENST00000374253 PPP1R12BO60237 982 aaPredicted RBP17.45■□□□□ 0.38
CNKSR1-202ENST00000374253 BCRP11274 1271 aa17.45■□□□□ 0.38
CNKSR1-202ENST00000374253 NOP2P46087 812 aaKnown RBP17.45■□□□□ 0.38
CNKSR1-202ENST00000374253 ARHGAP44Q17R89 818 aa17.45■□□□□ 0.38
CNKSR1-202ENST00000374253 SNRNP48Q6IEG0 339 aaKnown RBP17.45■□□□□ 0.38
CNKSR1-202ENST00000374253 TRPM4Q8TD43 1214 aa17.45■□□□□ 0.38
CNKSR1-202ENST00000374253 PXMP2Q9NR77 195 aa17.45■□□□□ 0.38
CNKSR1-202ENST00000374253 SLC16A4O15374 487 aa17.44■□□□□ 0.38
CNKSR1-202ENST00000374253 PHACTR2O75167 634 aa17.44■□□□□ 0.38
CNKSR1-202ENST00000374253 PEX3P56589 373 aa17.44■□□□□ 0.38
CNKSR1-202ENST00000374253 ARHGAP27Q6ZUM4 889 aa17.44■□□□□ 0.38
CNKSR1-202ENST00000374253 UBXN6Q9BZV1 441 aa17.44■□□□□ 0.38
CNKSR1-202ENST00000374253 SEL1LQ9UBV2 794 aa17.44■□□□□ 0.38
CNKSR1-202ENST00000374253 DMGDHQ9UI17 866 aaKnown RBP17.44■□□□□ 0.38
CNKSR1-202ENST00000374253 GOLGA8IPA6NC78 632 aa17.44■□□□□ 0.38
CNKSR1-202ENST00000374253 GOLGA8JA6NMD2 632 aa17.44■□□□□ 0.38
CNKSR1-202ENST00000374253 BACE1P56817 501 aa17.44■□□□□ 0.38
CNKSR1-202ENST00000374253 R3HDM1Q15032 1099 aaKnown RBP17.44■□□□□ 0.38
CNKSR1-202ENST00000374253 FAM102BQ5T8I3 360 aa17.44■□□□□ 0.38
CNKSR1-202ENST00000374253 ALKBH5Q6P6C2 394 aaKnown RBP17.44■□□□□ 0.38
CNKSR1-202ENST00000374253 NAGPAQ9UK23 515 aa17.44■□□□□ 0.38
CNKSR1-202ENST00000374253 GRID2IPA4D2P6 1211 aa17.43■□□□□ 0.38
CNKSR1-202ENST00000374253 ERICH4A6NGS2 130 aa17.43■□□□□ 0.38
CNKSR1-202ENST00000374253 PTPRAP18433 802 aa17.43■□□□□ 0.38
CNKSR1-202ENST00000374253 JAM2P57087 298 aa17.43■□□□□ 0.38
CNKSR1-202ENST00000374253 TUBB4BP68371 445 aa17.43■□□□□ 0.38
CNKSR1-202ENST00000374253 XKR9Q5GH70 373 aa17.43■□□□□ 0.38
CNKSR1-202ENST00000374253 WDR93Q6P2C0 686 aa17.43■□□□□ 0.38
CNKSR1-202ENST00000374253 STXBP4Q6ZWJ1 553 aa17.43■□□□□ 0.38
CNKSR1-202ENST00000374253 KCTD17Q8N5Z5 321 aa17.43■□□□□ 0.38
CNKSR1-202ENST00000374253 U2AF1L4Q8WU68 220 aaKnown RBP17.43■□□□□ 0.38
CNKSR1-202ENST00000374253 ELMO3Q96BJ8 720 aa17.43■□□□□ 0.38
CNKSR1-202ENST00000374253 RBM12Q9NTZ6 932 aaKnown RBP17.43■□□□□ 0.38
CNKSR1-202ENST00000374253 DNAJC12Q9UKB3 198 aa17.43■□□□□ 0.38
CNKSR1-202ENST00000374253 EVI5O60447 810 aa17.43■□□□□ 0.38
CNKSR1-202ENST00000374253 PPP1R37O75864 691 aa17.43■□□□□ 0.38
CNKSR1-202ENST00000374253 TCP1P17987 556 aaKnown RBP17.43■□□□□ 0.38
CNKSR1-202ENST00000374253 DRAP1Q14919 205 aaPredicted RBP17.43■□□□□ 0.38
CNKSR1-202ENST00000374253 RNF10Q8N5U6 811 aaKnown RBP17.43■□□□□ 0.38
CNKSR1-202ENST00000374253 ZNF280CQ8ND82 737 aa17.43■□□□□ 0.38
CNKSR1-202ENST00000374253 LUC7LQ9NQ29 371 aaKnown RBP17.43■□□□□ 0.38
CNKSR1-202ENST00000374253 PICK1Q9NRD5 415 aa17.43■□□□□ 0.38
CNKSR1-202ENST00000374253 DMAC2Q9NW81 257 aa17.43■□□□□ 0.38
CNKSR1-202ENST00000374253 KCND2Q9NZV8 630 aa17.43■□□□□ 0.38
CNKSR1-202ENST00000374253 LARSQ9P2J5 1176 aaKnown RBP17.43■□□□□ 0.38
CNKSR1-202ENST00000374253 RPS12P25398 132 aaKnown RBP17.42■□□□□ 0.38
CNKSR1-202ENST00000374253 SCYL3Q8IZE3 742 aa17.42■□□□□ 0.38
CNKSR1-202ENST00000374253 CCDC102AQ96A19 550 aa17.42■□□□□ 0.38
CNKSR1-202ENST00000374253 INTS2Q9H0H0 1204 aaKnown RBP17.42■□□□□ 0.38
CNKSR1-202ENST00000374253 SEPT11Q9NVA2 429 aaKnown RBP17.42■□□□□ 0.38
CNKSR1-202ENST00000374253 DDX3XO00571 662 aaKnown RBP eCLIP17.42■□□□□ 0.38
CNKSR1-202ENST00000374253 MUTP22033 750 aa17.42■□□□□ 0.38
CNKSR1-202ENST00000374253 GCLMP48507 274 aa17.42■□□□□ 0.38
CNKSR1-202ENST00000374253 MYL7Q01449 175 aa17.42■□□□□ 0.38
CNKSR1-202ENST00000374253 BFSP1Q12934 665 aa17.42■□□□□ 0.38
CNKSR1-202ENST00000374253 GLYCTKQ8IVS8 523 aa17.42■□□□□ 0.38
CNKSR1-202ENST00000374253 TEX2Q8IWB9 1127 aa17.42■□□□□ 0.38
CNKSR1-202ENST00000374253 NLGN2Q8NFZ4 835 aa17.42■□□□□ 0.38
CNKSR1-202ENST00000374253 STRA6Q9BX79 667 aa17.42■□□□□ 0.38
CNKSR1-202ENST00000374253 CCDC169A6NNP5 214 aa17.41■□□□□ 0.38
CNKSR1-202ENST00000374253 HAUS6Q7Z4H7 955 aa17.41■□□□□ 0.38
CNKSR1-202ENST00000374253 NEK9Q8TD19 979 aa17.41■□□□□ 0.38
CNKSR1-202ENST00000374253 RPGRIP1Q96KN7 1286 aa17.41■□□□□ 0.38
CNKSR1-202ENST00000374253 TBC1D22BQ9NU19 505 aa17.41■□□□□ 0.38
CNKSR1-202ENST00000374253 EMSYQ7Z589 1322 aa17.41■□□□□ 0.38
CNKSR1-202ENST00000374253 F8VZ95 297 aa17.41■□□□□ 0.38
CNKSR1-202ENST00000374253 PLS3P13797 630 aa17.41■□□□□ 0.38
CNKSR1-202ENST00000374253 PHLDB3Q6NSJ2 640 aa17.41■□□□□ 0.38
CNKSR1-202ENST00000374253 TXLNBQ8N3L3 684 aa17.41■□□□□ 0.38
CNKSR1-202ENST00000374253 LNX1Q8TBB1 728 aaPredicted RBP17.41■□□□□ 0.38
CNKSR1-202ENST00000374253 FAM84AQ96KN4 292 aa17.41■□□□□ 0.38
CNKSR1-202ENST00000374253 MTFR1LQ9H019 292 aa17.41■□□□□ 0.38
CNKSR1-202ENST00000374253 GGA3Q9NZ52 723 aa17.41■□□□□ 0.38
CNKSR1-202ENST00000374253 NR3C2P08235 984 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms