RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 SAFBQ15424 915 aaKnown RBP eCLIP21.18■□□□□ 0.98
TMEM53-201ENST00000372235 ABI1Q8IZP0 508 aa21.18■□□□□ 0.98
TMEM53-201ENST00000372235 NSUN7Q8NE18 718 aaKnown RBP21.18■□□□□ 0.98
TMEM53-201ENST00000372235 GJA10Q969M2 543 aa21.18■□□□□ 0.98
TMEM53-201ENST00000372235 PPP1R16BQ96T49 567 aa21.18■□□□□ 0.98
TMEM53-201ENST00000372235 VAV3Q9UKW4 847 aa21.18■□□□□ 0.98
TMEM53-201ENST00000372235 LIMCH1Q9UPQ0 1083 aa21.18■□□□□ 0.98
TMEM53-201ENST00000372235 TBKBP1A7MCY6 615 aa21.17■□□□□ 0.98
TMEM53-201ENST00000372235 GRM6O15303 877 aa21.17■□□□□ 0.98
TMEM53-201ENST00000372235 EOMESO95936 686 aa21.17■□□□□ 0.98
TMEM53-201ENST00000372235 FDPSP14324 419 aaKnown RBP21.17■□□□□ 0.98
TMEM53-201ENST00000372235 RFC5P40937 340 aa21.17■□□□□ 0.98
TMEM53-201ENST00000372235 DSC3Q14574 896 aa21.17■□□□□ 0.98
TMEM53-201ENST00000372235 COL19A1Q14993 1142 aa21.17■□□□□ 0.98
TMEM53-201ENST00000372235 PAN2Q504Q3 1202 aaKnown RBP21.17■□□□□ 0.98
TMEM53-201ENST00000372235 PDE12Q6L8Q7 609 aaKnown RBP21.17■□□□□ 0.98
TMEM53-201ENST00000372235 C4orf19Q8IY42 314 aa21.17■□□□□ 0.98
TMEM53-201ENST00000372235 NECAB1Q8N987 351 aa21.17■□□□□ 0.98
TMEM53-201ENST00000372235 LLPHQ9BRT6 129 aaKnown RBP21.17■□□□□ 0.98
TMEM53-201ENST00000372235 TMEM117Q9H0C3 514 aa21.17■□□□□ 0.98
TMEM53-201ENST00000372235 CUL9Q8IWT3 2517 aa21.17■□□□□ 0.98
TMEM53-201ENST00000372235 WDR81Q562E7 1941 aa21.16■□□□□ 0.98
TMEM53-201ENST00000372235 LAG3P18627 525 aa21.16■□□□□ 0.98
TMEM53-201ENST00000372235 NEK9Q8TD19 979 aa21.16■□□□□ 0.98
TMEM53-201ENST00000372235 OXER1Q8TDS5 423 aa21.16■□□□□ 0.98
TMEM53-201ENST00000372235 ZSCAN31Q96LW9 406 aaPredicted RBP21.16■□□□□ 0.98
TMEM53-201ENST00000372235 ZSWIM4Q9H7M6 989 aa21.16■□□□□ 0.98
TMEM53-201ENST00000372235 CYP26B1Q9NR63 512 aa21.16■□□□□ 0.98
TMEM53-201ENST00000372235 SUCLA2Q9P2R7 463 aaPredicted RBP21.16■□□□□ 0.98
TMEM53-201ENST00000372235 VCANP13611 3396 aa21.16■□□□□ 0.98
TMEM53-201ENST00000372235 A0A0U1RQF3 1178 aa21.15■□□□□ 0.98
TMEM53-201ENST00000372235 STBD1O95210 358 aa21.15■□□□□ 0.98
TMEM53-201ENST00000372235 ANO5Q75V66 913 aa21.15■□□□□ 0.98
TMEM53-201ENST00000372235 KLHL23Q8NBE8 558 aa21.15■□□□□ 0.98
TMEM53-201ENST00000372235 TCP11Q8WWU5 503 aa21.15■□□□□ 0.98
TMEM53-201ENST00000372235 HAS1Q92839 578 aa21.15■□□□□ 0.98
TMEM53-201ENST00000372235 CEP170P1Q96L14 293 aa21.15■□□□□ 0.98
TMEM53-201ENST00000372235 CEP89Q96ST8 783 aa21.15■□□□□ 0.98
TMEM53-201ENST00000372235 TRAIPQ9BWF2 469 aa21.15■□□□□ 0.98
TMEM53-201ENST00000372235 C1QTNF1Q9BXJ1 281 aa21.15■□□□□ 0.98
TMEM53-201ENST00000372235 PCDHA12Q9UN75 941 aa21.15■□□□□ 0.98
TMEM53-201ENST00000372235 ASAP2O43150 1006 aa21.14■□□□□ 0.97
TMEM53-201ENST00000372235 ITGB1P05556 798 aa21.14■□□□□ 0.97
TMEM53-201ENST00000372235 IBSPP21815 317 aaPredicted RBP21.14■□□□□ 0.97
TMEM53-201ENST00000372235 POLGP54098 1239 aaPredicted RBP21.14■□□□□ 0.97
TMEM53-201ENST00000372235 HMGN5P82970 282 aaKnown RBP21.14■□□□□ 0.97
TMEM53-201ENST00000372235 NR5A1Q13285 461 aa21.14■□□□□ 0.97
TMEM53-201ENST00000372235 CALCRLQ16602 461 aa21.14■□□□□ 0.97
TMEM53-201ENST00000372235 PTCRAQ6ISU1 281 aaPredicted RBP21.14■□□□□ 0.97
TMEM53-201ENST00000372235 EP400NLQ6ZTU2 488 aa21.14■□□□□ 0.97
TMEM53-201ENST00000372235 RHPN2Q8IUC4 686 aa21.14■□□□□ 0.97
TMEM53-201ENST00000372235 DIS3L2Q8IYB7 885 aaKnown RBP21.14■□□□□ 0.97
TMEM53-201ENST00000372235 LRRC43Q8N309 656 aa21.14■□□□□ 0.97
TMEM53-201ENST00000372235 SPPL3Q8TCT6 385 aa21.14■□□□□ 0.97
TMEM53-201ENST00000372235 TNFRSF25Q93038 417 aa21.14■□□□□ 0.97
TMEM53-201ENST00000372235 MRPL9Q9BYD2 267 aaKnown RBP21.14■□□□□ 0.97
TMEM53-201ENST00000372235 ALG13Q9NP73 1137 aaKnown RBP21.14■□□□□ 0.97
TMEM53-201ENST00000372235 SH2B1Q9NRF2 756 aaPredicted RBP21.14■□□□□ 0.97
TMEM53-201ENST00000372235 GJB4Q9NTQ9 266 aa21.14■□□□□ 0.97
TMEM53-201ENST00000372235 CLDND1Q9NY35 253 aa21.14■□□□□ 0.97
TMEM53-201ENST00000372235 PUF60Q9UHX1 559 aaKnown RBP21.14■□□□□ 0.97
TMEM53-201ENST00000372235 EML1O00423 815 aa21.13■□□□□ 0.97
TMEM53-201ENST00000372235 YWHABP31946 246 aaKnown RBP21.13■□□□□ 0.97
TMEM53-201ENST00000372235 PPM1AP35813 382 aa21.13■□□□□ 0.97
TMEM53-201ENST00000372235 RAB27AP51159 221 aa21.13■□□□□ 0.97
TMEM53-201ENST00000372235 PCBP1Q15365 356 aaKnown RBP eCLIP21.13■□□□□ 0.97
TMEM53-201ENST00000372235 FAM102BQ5T8I3 360 aa21.13■□□□□ 0.97
TMEM53-201ENST00000372235 NCAPH2Q6IBW4 605 aa21.13■□□□□ 0.97
TMEM53-201ENST00000372235 ECHDC2Q86YB7 292 aa21.13■□□□□ 0.97
TMEM53-201ENST00000372235 POTEDQ86YR6 584 aa21.13■□□□□ 0.97
TMEM53-201ENST00000372235 THNSL1Q8IYQ7 743 aa21.13■□□□□ 0.97
TMEM53-201ENST00000372235 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.13■□□□□ 0.97
TMEM53-201ENST00000372235 POF1BQ8WVV4 589 aa21.13■□□□□ 0.97
TMEM53-201ENST00000372235 PSPC1Q8WXF1 523 aaKnown RBP21.13■□□□□ 0.97
TMEM53-201ENST00000372235 LXNQ9BS40 222 aa21.13■□□□□ 0.97
TMEM53-201ENST00000372235 PRKAG3Q9UGI9 489 aa21.13■□□□□ 0.97
TMEM53-201ENST00000372235 LZTS1Q9Y250 596 aa21.13■□□□□ 0.97
TMEM53-201ENST00000372235 GRXCR2A6NFK2 248 aa21.12■□□□□ 0.97
TMEM53-201ENST00000372235 BTBD18B2RXH4 712 aa21.12■□□□□ 0.97
TMEM53-201ENST00000372235 NEMFO60524 1076 aa21.12■□□□□ 0.97
TMEM53-201ENST00000372235 LARGE1O95461 756 aa21.12■□□□□ 0.97
TMEM53-201ENST00000372235 ORC2Q13416 577 aaPredicted RBP21.12■□□□□ 0.97
TMEM53-201ENST00000372235 CTC1Q2NKJ3 1217 aa21.12■□□□□ 0.97
TMEM53-201ENST00000372235 CDCA3Q99618 268 aaPredicted RBP21.12■□□□□ 0.97
TMEM53-201ENST00000372235 DHX33Q9H6R0 707 aaKnown RBP21.12■□□□□ 0.97
TMEM53-201ENST00000372235 TYW1Q9NV66 732 aaKnown RBP21.12■□□□□ 0.97
TMEM53-201ENST00000372235 A0A087WZ62 844 aa21.11■□□□□ 0.97
TMEM53-201ENST00000372235 RBAK-RBAKDNI3L0D1 243 aa21.11■□□□□ 0.97
TMEM53-201ENST00000372235 PLCB3Q01970 1234 aa21.11■□□□□ 0.97
TMEM53-201ENST00000372235 KRT17Q04695 432 aa21.11■□□□□ 0.97
TMEM53-201ENST00000372235 BMS1Q14692 1282 aaKnown RBP21.11■□□□□ 0.97
TMEM53-201ENST00000372235 SRGAP1Q7Z6B7 1085 aa21.11■□□□□ 0.97
TMEM53-201ENST00000372235 COLGALT1Q8NBJ5 622 aa21.11■□□□□ 0.97
TMEM53-201ENST00000372235 CCDC43Q96MW1 224 aaKnown RBP21.11■□□□□ 0.97
TMEM53-201ENST00000372235 FDXACB1Q9BRP7 624 aaPredicted RBP21.11■□□□□ 0.97
TMEM53-201ENST00000372235 TTC12Q9H892 705 aaPredicted RBP21.11■□□□□ 0.97
TMEM53-201ENST00000372235 TLR9Q9NR96 1032 aa21.11■□□□□ 0.97
TMEM53-201ENST00000372235 COL4A3BPQ9Y5P4 624 aa21.11■□□□□ 0.97
TMEM53-201ENST00000372235 FGF18O76093 207 aa21.1■□□□□ 0.97
TMEM53-201ENST00000372235 LYPLA2O95372 231 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms