RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 ZCRB1Q8TBF4 217 aaKnown RBP12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 NEK9Q8TD19 979 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 NRG4Q8WWG1 115 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 ARHGEF26Q96DR7 871 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 FAM163AQ96GL9 167 aaPredicted RBP12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 TBC1D7Q9P0N9 293 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 PALM3A6NDB9 673 aaPredicted RBP12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 WFS1O76024 890 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 AGTP01019 485 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 RBM5P52756 815 aaKnown RBP eCLIP12.65□□□□□ -0.389e-8■□□□□ 9.1
SMARCA1-201ENST00000371121 FKBP3Q00688 224 aaKnown RBP12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 DR1Q01658 176 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 KCNH2Q12809 1159 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 SUSD4Q5VX71 490 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 MFSD5Q6N075 450 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 PROM2Q8N271 834 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 GALNT15Q8N3T1 639 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 PIGBQ92521 554 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 TCP11L1Q9NUJ3 509 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 WDR35Q9P2L0 1181 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 UTP11Q9Y3A2 253 aaKnown RBP12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 UNC5CO95185 931 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 ALAS1P13196 640 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 FOXN2P32314 431 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 TXKP42681 527 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 CHRNDQ07001 517 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 ASIC2Q16515 512 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 KIF6Q6ZMV9 814 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 SV2BQ7L1I2 683 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 OTUD6AQ7L8S5 288 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 CPNE8Q86YQ8 564 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 PRELID2Q8N945 189 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 DRAXINQ8NBI3 349 aaPredicted RBP12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 PNMA1Q8ND90 353 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 NSUN4Q96CB9 384 aaKnown RBP12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 RPS6KC1Q96S38 1066 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 EPAS1Q99814 870 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 NUCKS1Q9H1E3 243 aaKnown RBP12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 TAS2R14Q9NYV8 317 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 SAMD15Q9P1V8 674 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 STRCP1A6NGW2 1772 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 UBAP1LF5GYI3 381 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 HGSO14964 777 aaPredicted RBP12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 RNF8O76064 485 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 TDP2O95551 362 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 CHRNB2P17787 502 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 CACNB1Q02641 598 aaPredicted RBP12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 ZC2HC1CQ53FD0 456 aaPredicted RBP12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 KIAA1755Q5JYT7 1200 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 PEX26Q7Z412 305 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 ATL2Q8NHH9 583 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 TTC8Q8TAM2 541 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 TBCKQ8TEA7 893 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 TAF4BQ92750 862 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 POP1Q99575 1024 aaKnown RBP12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 CNOT7Q9UIV1 285 aaKnown RBP12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 GRID1Q9ULK0 1009 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 ZBTB1Q9Y2K1 713 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 NPTXRO95502 500 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 MAPK7Q13164 816 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 SIX1Q15475 284 aaPredicted RBP12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 TAF11Q15544 211 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 LONRF1Q17RB8 773 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 TRIM68Q6AZZ1 485 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 SLC30A9Q6PML9 568 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 DAAM2Q86T65 1068 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 ENDOVQ8N8Q3 282 aaKnown RBP12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 FAM13CQ8NE31 585 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 DYNLL2Q96FJ2 89 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 C2CD2Q9Y426 696 aa12.64□□□□□ -0.39
SMARCA1-201ENST00000371121 A0A0A6YYK5 440 aaPredicted RBP12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 SP100P23497 879 aaPredicted RBP12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 FXR2P51116 673 aaKnown RBP eCLIP12.63□□□□□ -0.391e-7■■■□□ 14.9
SMARCA1-201ENST00000371121 CMPK2Q5EBM0 449 aa12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 MGARPQ8TDB4 240 aa12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 IKZF4Q9H2S9 585 aa12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 RNPEPL1Q9HAU8 725 aa12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 NAV1Q8NEY1 1877 aa12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 ATP8B3O60423 1300 aa12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 TMEM120BA0PK00 339 aa12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 TRAF5O00463 557 aa12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 LGR5O75473 907 aa12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 USP17L8P0C7I0 530 aa12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 FGFR1P11362 822 aa12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 CYP19A1P11511 503 aaPredicted RBP12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 ATP6V1C1P21283 382 aa12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 POLD1P28340 1107 aa12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 PDE6CP51160 858 aa12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 GALCP54803 685 aa12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 DRG2P55039 364 aaKnown RBP12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 SGSM1Q2NKQ1 1148 aa12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 ARSHQ5FYA8 562 aa12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 C3orf67Q6ZVT6 689 aa12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 HOOK3Q86VS8 718 aa12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 NELFCDQ8IXH7 590 aa12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 SLC35G2Q8TBE7 412 aa12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 ASAP3Q8TDY4 903 aa12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 KRT35Q92764 455 aa12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 HAS1Q92839 578 aa12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 ITFG2Q969R8 447 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms