RNA–Protein interactions for RNA: ENST00000369091.6

PRDM1-202, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 2,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-202ENST00000369091 SLC9A1P19634 815 aa20.25■□□□□ 0.83
PRDM1-202ENST00000369091 MUM1Q2TAK8 710 aa20.25■□□□□ 0.83
PRDM1-202ENST00000369091 ARHGAP27Q6ZUM4 889 aa20.25■□□□□ 0.83
PRDM1-202ENST00000369091 ARHGEF2Q92974 986 aaKnown RBP20.25■□□□□ 0.83
PRDM1-202ENST00000369091 IFT43Q96FT9 208 aa20.25■□□□□ 0.83
PRDM1-202ENST00000369091 FGD4Q96M96 766 aa20.25■□□□□ 0.83
PRDM1-202ENST00000369091 PPP1R9AQ9ULJ8 1098 aa20.25■□□□□ 0.83
PRDM1-202ENST00000369091 IRS4O14654 1257 aaPredicted RBP20.24■□□□□ 0.83
PRDM1-202ENST00000369091 IGHMBP2P38935 993 aaKnown RBP20.24■□□□□ 0.83
PRDM1-202ENST00000369091 TNIP1Q15025 636 aa20.24■□□□□ 0.83
PRDM1-202ENST00000369091 SLC35G1Q2M3R5 365 aa20.24■□□□□ 0.83
PRDM1-202ENST00000369091 TSNAXIP1Q2TAA8 658 aa20.24■□□□□ 0.83
PRDM1-202ENST00000369091 SEPT14Q6ZU15 432 aa20.24■□□□□ 0.83
PRDM1-202ENST00000369091 FAM47EQ6ZV65 393 aa20.24■□□□□ 0.83
PRDM1-202ENST00000369091 PNMA5Q96PV4 448 aa20.24■□□□□ 0.83
PRDM1-202ENST00000369091 PPP1R12CQ9BZL4 782 aa20.24■□□□□ 0.83
PRDM1-202ENST00000369091 KLHL14Q9P2G3 628 aa20.24■□□□□ 0.83
PRDM1-202ENST00000369091 PLCH1Q4KWH8 1693 aa20.24■□□□□ 0.83
PRDM1-202ENST00000369091 EPHB2P29323 1055 aa20.24■□□□□ 0.83
PRDM1-202ENST00000369091 EPS15P42566 896 aa20.24■□□□□ 0.83
PRDM1-202ENST00000369091 GNAQP50148 359 aa20.24■□□□□ 0.83
PRDM1-202ENST00000369091 FKBP3Q00688 224 aaKnown RBP20.24■□□□□ 0.83
PRDM1-202ENST00000369091 LRRC23Q53EV4 343 aaPredicted RBP20.24■□□□□ 0.83
PRDM1-202ENST00000369091 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.24■□□□□ 0.83
PRDM1-202ENST00000369091 RBM46Q8TBY0 533 aaKnown RBP20.24■□□□□ 0.83
PRDM1-202ENST00000369091 FAM136AQ96C01 138 aa20.24■□□□□ 0.83
PRDM1-202ENST00000369091 ERP27Q96DN0 273 aa20.24■□□□□ 0.83
PRDM1-202ENST00000369091 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.24■□□□□ 0.83
PRDM1-202ENST00000369091 AMFRQ9UKV5 643 aa20.24■□□□□ 0.83
PRDM1-202ENST00000369091 LAD1O00515 517 aa20.23■□□□□ 0.83
PRDM1-202ENST00000369091 DDX3YO15523 660 aaKnown RBP20.23■□□□□ 0.83
PRDM1-202ENST00000369091 PLCG2P16885 1265 aa20.23■□□□□ 0.83
PRDM1-202ENST00000369091 TXKP42681 527 aa20.23■□□□□ 0.83
PRDM1-202ENST00000369091 ZCWPW2Q504Y3 356 aa20.23■□□□□ 0.83
PRDM1-202ENST00000369091 KCNK18Q7Z418 384 aa20.23■□□□□ 0.83
PRDM1-202ENST00000369091 CKAP2Q8WWK9 683 aa20.23■□□□□ 0.83
PRDM1-202ENST00000369091 LARP4BQ92615 738 aaKnown RBP20.23■□□□□ 0.83
PRDM1-202ENST00000369091 DDX12PQ92771 950 aa20.23■□□□□ 0.83
PRDM1-202ENST00000369091 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.23■□□□□ 0.83
PRDM1-202ENST00000369091 NMRK1Q9NWW6 199 aa20.23■□□□□ 0.83
PRDM1-202ENST00000369091 AJAP1Q9UKB5 411 aaPredicted RBP20.23■□□□□ 0.83
PRDM1-202ENST00000369091 PFASO15067 1338 aa20.23■□□□□ 0.83
PRDM1-202ENST00000369091 ANKRD63C9JTQ0 380 aa20.23■□□□□ 0.83
PRDM1-202ENST00000369091 VSIG1Q86XK7 387 aa20.23■□□□□ 0.83
PRDM1-202ENST00000369091 TRIM59Q8IWR1 403 aa20.23■□□□□ 0.83
PRDM1-202ENST00000369091 MYOCDQ8IZQ8 938 aa20.23■□□□□ 0.83
PRDM1-202ENST00000369091 U2AF1L4Q8WU68 220 aaKnown RBP20.23■□□□□ 0.83
PRDM1-202ENST00000369091 LRMDAQ9H2I8 198 aa20.23■□□□□ 0.83
PRDM1-202ENST00000369091 TXLNGQ9NUQ3 528 aa20.23■□□□□ 0.83
PRDM1-202ENST00000369091 BCL9O00512 1426 aa20.23■□□□□ 0.83
PRDM1-202ENST00000369091 PVALEFA0A1B0GWK0 134 aa20.23■□□□□ 0.83
PRDM1-202ENST00000369091 USP17L12C9JPN9 530 aa20.23■□□□□ 0.83
PRDM1-202ENST00000369091 USP17L21D6R901 530 aa20.23■□□□□ 0.83
PRDM1-202ENST00000369091 E7ENQ6 273 aa20.23■□□□□ 0.83
PRDM1-202ENST00000369091 SKIV2L2P42285 1042 aaKnown RBP20.23■□□□□ 0.83
PRDM1-202ENST00000369091 TRIM28Q13263 835 aaKnown RBP20.23■□□□□ 0.83
PRDM1-202ENST00000369091 C10orf76Q5T2E6 689 aa20.23■□□□□ 0.83
PRDM1-202ENST00000369091 ZNF449Q6P9G9 518 aa20.23■□□□□ 0.83
PRDM1-202ENST00000369091 STMN4Q9H169 189 aaPredicted RBP20.23■□□□□ 0.83
PRDM1-202ENST00000369091 CHCHD3Q9NX63 227 aaKnown RBP20.23■□□□□ 0.83
PRDM1-202ENST00000369091 CNOT7Q9UIV1 285 aaKnown RBP20.23■□□□□ 0.83
PRDM1-202ENST00000369091 H2AFZP0C0S5 128 aa20.22■□□□□ 0.83
PRDM1-202ENST00000369091 MAPK7Q13164 816 aa20.22■□□□□ 0.83
PRDM1-202ENST00000369091 H2AFVQ71UI9 128 aa20.22■□□□□ 0.83
PRDM1-202ENST00000369091 INTS8Q75QN2 995 aaKnown RBP20.22■□□□□ 0.83
PRDM1-202ENST00000369091 ATL2Q8NHH9 583 aa20.22■□□□□ 0.83
PRDM1-202ENST00000369091 NUDT12Q9BQG2 462 aa20.22■□□□□ 0.83
PRDM1-202ENST00000369091 KIAA1683Q9H0B3 1180 aa20.22■□□□□ 0.83
PRDM1-202ENST00000369091 TMOD4Q9NZQ9 345 aa20.22■□□□□ 0.83
PRDM1-202ENST00000369091 ACSL3O95573 720 aa20.22■□□□□ 0.83
PRDM1-202ENST00000369091 CYP2D6P10635 497 aa20.22■□□□□ 0.83
PRDM1-202ENST00000369091 RASA1P20936 1047 aa20.22■□□□□ 0.83
PRDM1-202ENST00000369091 RCN2Q14257 317 aa20.22■□□□□ 0.83
PRDM1-202ENST00000369091 PARP6Q2NL67 630 aa20.22■□□□□ 0.83
PRDM1-202ENST00000369091 CMPK2Q5EBM0 449 aa20.22■□□□□ 0.83
PRDM1-202ENST00000369091 RNF43Q68DV7 783 aa20.22■□□□□ 0.83
PRDM1-202ENST00000369091 KIF6Q6ZMV9 814 aa20.22■□□□□ 0.83
PRDM1-202ENST00000369091 NLRP10Q86W26 655 aa20.22■□□□□ 0.83
PRDM1-202ENST00000369091 MAIP1Q8WWC4 291 aa20.22■□□□□ 0.83
PRDM1-202ENST00000369091 RIOK1Q9BRS2 568 aaKnown RBP20.22■□□□□ 0.83
PRDM1-202ENST00000369091 PCDH11XQ9BZA7 1347 aa20.21■□□□□ 0.83
PRDM1-202ENST00000369091 IGSF9BQ9UPX0 1349 aa20.21■□□□□ 0.83
PRDM1-202ENST00000369091 CASZ1Q86V15 1759 aa20.21■□□□□ 0.83
PRDM1-202ENST00000369091 SCNN1BP51168 640 aa20.21■□□□□ 0.83
PRDM1-202ENST00000369091 ZC2HC1CQ53FD0 456 aaPredicted RBP20.21■□□□□ 0.83
PRDM1-202ENST00000369091 BTNL9Q6UXG8 535 aa20.21■□□□□ 0.83
PRDM1-202ENST00000369091 APBB1IPQ7Z5R6 666 aaPredicted RBP20.21■□□□□ 0.83
PRDM1-202ENST00000369091 CCNJLQ8IV13 435 aa20.21■□□□□ 0.83
PRDM1-202ENST00000369091 APLFQ8IW19 511 aaPredicted RBP20.21■□□□□ 0.83
PRDM1-202ENST00000369091 ENDOVQ8N8Q3 282 aaKnown RBP20.21■□□□□ 0.83
PRDM1-202ENST00000369091 SH3RF3Q8TEJ3 882 aaPredicted RBP20.21■□□□□ 0.83
PRDM1-202ENST00000369091 ZNF333Q96JL9 665 aa20.21■□□□□ 0.83
PRDM1-202ENST00000369091 TMEM109Q9BVC6 243 aa20.21■□□□□ 0.83
PRDM1-202ENST00000369091 VCXQ9H320 206 aa20.21■□□□□ 0.83
PRDM1-202ENST00000369091 CPVLQ9H3G5 476 aa20.21■□□□□ 0.83
PRDM1-202ENST00000369091 DENND2DQ9H6A0 471 aaPredicted RBP20.21■□□□□ 0.83
PRDM1-202ENST00000369091 RIC8AQ9NPQ8 531 aa20.21■□□□□ 0.83
PRDM1-202ENST00000369091 SH3GLB2Q9NR46 395 aa20.21■□□□□ 0.83
PRDM1-202ENST00000369091 FAM187AA6NFU0 413 aa20.21■□□□□ 0.83
PRDM1-202ENST00000369091 NVLO15381 856 aaKnown RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms