RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 TBC1D7Q9P0N9 293 aa13.31□□□□□ -0.28
USF1-203ENST00000368021 LARSQ9P2J5 1176 aaKnown RBP13.31□□□□□ -0.28
USF1-203ENST00000368021 LIMA1Q9UHB6 759 aaKnown RBP13.31□□□□□ -0.28
USF1-203ENST00000368021 UBE4BO95155 1302 aa13.3□□□□□ -0.28
USF1-203ENST00000368021 HIP1RO75146 1068 aa13.3□□□□□ -0.28
USF1-203ENST00000368021 SNAI1O95863 264 aaPredicted RBP13.3□□□□□ -0.28
USF1-203ENST00000368021 MAPTP10636 758 aaKnown RBP13.3□□□□□ -0.28
USF1-203ENST00000368021 LRRC41Q15345 812 aa13.3□□□□□ -0.28
USF1-203ENST00000368021 SYCP1Q15431 976 aa13.3□□□□□ -0.28
USF1-203ENST00000368021 TCP11X2Q5H9J9 407 aa13.3□□□□□ -0.28
USF1-203ENST00000368021 MAP3K21Q5TCX8 1036 aa13.3□□□□□ -0.28
USF1-203ENST00000368021 STXBP4Q6ZWJ1 553 aa13.3□□□□□ -0.28
USF1-203ENST00000368021 IRF2BP1Q8IU81 584 aa13.3□□□□□ -0.28
USF1-203ENST00000368021 DRC7Q8IY82 874 aa13.3□□□□□ -0.28
USF1-203ENST00000368021 TRPV1Q8NER1 839 aa13.3□□□□□ -0.28
USF1-203ENST00000368021 ZNF507Q8TCN5 953 aa13.3□□□□□ -0.28
USF1-203ENST00000368021 EMID1Q96A84 441 aaPredicted RBP13.3□□□□□ -0.28
USF1-203ENST00000368021 DRC1Q96MC2 740 aa13.3□□□□□ -0.28
USF1-203ENST00000368021 FIZ1Q96SL8 496 aa13.3□□□□□ -0.28
USF1-203ENST00000368021 GPR20Q99678 358 aa13.3□□□□□ -0.28
USF1-203ENST00000368021 SRRTQ9BXP5 876 aaKnown RBP13.3□□□□□ -0.28
USF1-203ENST00000368021 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.3□□□□□ -0.28
USF1-203ENST00000368021 KCTD10Q9H3F6 313 aa13.3□□□□□ -0.28
USF1-203ENST00000368021 ABHD16BQ9H3Z7 469 aa13.3□□□□□ -0.28
USF1-203ENST00000368021 ARID2Q68CP9 1835 aa13.3□□□□□ -0.28
USF1-203ENST00000368021 KCNJ18B7U540 433 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 NOP56O00567 594 aaKnown RBP13.29□□□□□ -0.28
USF1-203ENST00000368021 SORBS3O60504 671 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 USO1O60763 962 aaKnown RBP13.29□□□□□ -0.28
USF1-203ENST00000368021 LGR5O75473 907 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 DGAT1O75907 488 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 OATP04181 439 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 TCF7P36402 384 aaPredicted RBP13.29□□□□□ -0.28
USF1-203ENST00000368021 STAT5BP51692 787 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 CASP5P51878 434 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 NPEPPSP55786 919 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 KCNJ12Q14500 433 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 ODR4Q5SWX8 454 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 PLA2G4FQ68DD2 849 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 FAM178BQ8IXR5 827 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 DHX37Q8IY37 1157 aaKnown RBP13.29□□□□□ -0.28
USF1-203ENST00000368021 SPC24Q8NBT2 197 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 SLC17A8Q8NDX2 589 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 U2AF1L4Q8WU68 220 aaKnown RBP13.29□□□□□ -0.28
USF1-203ENST00000368021 CEP170P1Q96L14 293 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 PCYT2Q99447 389 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 CYP26B1Q9NR63 512 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 PDGFCQ9NRA1 345 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 IMPACTQ9P2X3 320 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 PPME1Q9Y570 386 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 EMSYQ7Z589 1322 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 TMEM150BA6NC51 233 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 SFI1A8K8P3 1242 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 GCNT3O95395 438 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 GJB1P08034 283 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 ATP4AP20648 1035 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 SLC26A2P50443 739 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 FKBP3Q00688 224 aaKnown RBP13.29□□□□□ -0.28
USF1-203ENST00000368021 ALCAMQ13740 583 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 LAMC2Q13753 1193 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 NR1I3Q14994 352 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 KRT31Q15323 416 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 KNOP1Q1ED39 458 aaKnown RBP13.29□□□□□ -0.28
USF1-203ENST00000368021 EDRF1Q3B7T1 1238 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 HSDL1Q3SXM5 330 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 FILIP1LQ4L180 1135 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 ZNF720Q7Z2F6 126 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 MCPH1Q8NEM0 835 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 FAM167AQ96KS9 214 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 SPATA33Q96N06 139 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 NIFKQ9BYG3 293 aaKnown RBP13.29□□□□□ -0.28
USF1-203ENST00000368021 AZI2Q9H6S1 392 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 C17orf75Q9HAS0 396 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 PAK6Q9NQU5 681 aaPredicted RBP13.29□□□□□ -0.28
USF1-203ENST00000368021 PDLIM7Q9NR12 457 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 INTS13Q9NVM9 706 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 SEPT9Q9UHD8 586 aaPredicted RBP13.29□□□□□ -0.28
USF1-203ENST00000368021 TRAF3IP3Q9Y228 551 aa13.29□□□□□ -0.28
USF1-203ENST00000368021 PDXKO00764 312 aa13.28□□□□□ -0.28
USF1-203ENST00000368021 IGHA2P01877 340 aa13.28□□□□□ -0.28
USF1-203ENST00000368021 TFRCP02786 760 aaKnown RBP13.28□□□□□ -0.28
USF1-203ENST00000368021 MYCNP04198 464 aaPredicted RBP13.28□□□□□ -0.28
USF1-203ENST00000368021 MYBP10242 640 aa13.28□□□□□ -0.28
USF1-203ENST00000368021 CYBAP13498 195 aa13.28□□□□□ -0.28
USF1-203ENST00000368021 PLS3P13797 630 aa13.28□□□□□ -0.28
USF1-203ENST00000368021 RTP1P59025 263 aa13.28□□□□□ -0.28
USF1-203ENST00000368021 LRRC55Q6ZSA7 311 aa13.28□□□□□ -0.28
USF1-203ENST00000368021 PLPPR4Q7Z2D5 763 aa13.28□□□□□ -0.28
USF1-203ENST00000368021 VSTM4Q8IW00 320 aa13.28□□□□□ -0.28
USF1-203ENST00000368021 ZC3H3Q8IXZ2 948 aaKnown RBP13.28□□□□□ -0.28
USF1-203ENST00000368021 KIFAP3Q92845 792 aa13.28□□□□□ -0.28
USF1-203ENST00000368021 CEP63Q96MT8 703 aa13.28□□□□□ -0.28
USF1-203ENST00000368021 STRA6Q9BX79 667 aa13.28□□□□□ -0.28
USF1-203ENST00000368021 ST6GALNAC4Q9H4F1 302 aa13.28□□□□□ -0.28
USF1-203ENST00000368021 NRBP2Q9NSY0 501 aa13.28□□□□□ -0.28
USF1-203ENST00000368021 MAGEC2Q9UBF1 373 aaPredicted RBP13.28□□□□□ -0.28
USF1-203ENST00000368021 PCDHB13Q9Y5F0 798 aa13.28□□□□□ -0.28
USF1-203ENST00000368021 NKRFO15226 690 aaKnown RBP eCLIP13.27□□□□□ -0.28
USF1-203ENST00000368021 PPP1R37O75864 691 aa13.27□□□□□ -0.28
USF1-203ENST00000368021 SGPL1O95470 568 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms