RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 SLURP1P55000 103 aa5.81□□□□□ -1.48
RNU6-560P-201ENST00000364007 LGALS4P56470 323 aa5.81□□□□□ -1.48
RNU6-560P-201ENST00000364007 PCBP2Q15366 365 aaKnown RBP eCLIP5.81□□□□□ -1.48
RNU6-560P-201ENST00000364007 TOR2AQ5JU69 321 aa5.81□□□□□ -1.48
RNU6-560P-201ENST00000364007 Q6ZUG5 572 aa5.81□□□□□ -1.48
RNU6-560P-201ENST00000364007 LARP4Q71RC2 724 aaKnown RBP eCLIP5.81□□□□□ -1.48
RNU6-560P-201ENST00000364007 ZNF761Q86XN6 746 aaPredicted RBP5.81□□□□□ -1.48
RNU6-560P-201ENST00000364007 SLC41A1Q8IVJ1 513 aa5.81□□□□□ -1.48
RNU6-560P-201ENST00000364007 TMEM151BQ8IW70 566 aa5.81□□□□□ -1.48
RNU6-560P-201ENST00000364007 LRRC56Q8IYG6 542 aaPredicted RBP5.81□□□□□ -1.48
RNU6-560P-201ENST00000364007 C1orf162Q8NEQ5 155 aaPredicted RBP5.81□□□□□ -1.48
RNU6-560P-201ENST00000364007 FUBP3Q96I24 572 aaKnown RBP eCLIP5.81□□□□□ -1.48
RNU6-560P-201ENST00000364007 FAXDC2Q96IV6 333 aa5.81□□□□□ -1.48
RNU6-560P-201ENST00000364007 ORAI2Q96SN7 254 aa5.81□□□□□ -1.48
RNU6-560P-201ENST00000364007 NOL10Q9BSC4 688 aaKnown RBP5.81□□□□□ -1.48
RNU6-560P-201ENST00000364007 PITHD1Q9GZP4 211 aaPredicted RBP5.81□□□□□ -1.48
RNU6-560P-201ENST00000364007 QRSL1Q9H0R6 528 aaKnown RBP5.81□□□□□ -1.48
RNU6-560P-201ENST00000364007 TMEM168Q9H0V1 697 aa5.81□□□□□ -1.48
RNU6-560P-201ENST00000364007 KCMF1Q9P0J7 381 aa5.81□□□□□ -1.48
RNU6-560P-201ENST00000364007 Q9UFV3 132 aa5.81□□□□□ -1.48
RNU6-560P-201ENST00000364007 PTPN22Q9Y2R2 807 aa5.81□□□□□ -1.48
RNU6-560P-201ENST00000364007 ZDHHC9Q9Y397 364 aa5.81□□□□□ -1.48
RNU6-560P-201ENST00000364007 A0A0A6YYK5 440 aaPredicted RBP5.8□□□□□ -1.48
RNU6-560P-201ENST00000364007 FZD9O00144 591 aa5.8□□□□□ -1.48
RNU6-560P-201ENST00000364007 PCDHGA12O60330 932 aa5.8□□□□□ -1.48
RNU6-560P-201ENST00000364007 MAFO75444 373 aaPredicted RBP5.8□□□□□ -1.48
RNU6-560P-201ENST00000364007 ALDH1L1O75891 902 aa5.8□□□□□ -1.48
RNU6-560P-201ENST00000364007 SRSF2Q01130 221 aaKnown RBP5.8□□□□□ -1.48
RNU6-560P-201ENST00000364007 EIF4HQ15056 248 aaKnown RBP5.8□□□□□ -1.48
RNU6-560P-201ENST00000364007 DGKDQ16760 1214 aa5.8□□□□□ -1.48
RNU6-560P-201ENST00000364007 PTPN21Q16825 1174 aa5.8□□□□□ -1.48
RNU6-560P-201ENST00000364007 RGL3Q3MIN7 710 aa5.8□□□□□ -1.48
RNU6-560P-201ENST00000364007 RAVER1Q8IY67 606 aaKnown RBP5.8□□□□□ -1.48
RNU6-560P-201ENST00000364007 OR5AN1Q8NGI8 311 aa5.8□□□□□ -1.48
RNU6-560P-201ENST00000364007 SLC2A13Q96QE2 648 aa5.8□□□□□ -1.48
RNU6-560P-201ENST00000364007 SOX7Q9BT81 388 aa5.8□□□□□ -1.48
RNU6-560P-201ENST00000364007 KCTD10Q9H3F6 313 aa5.8□□□□□ -1.48
RNU6-560P-201ENST00000364007 CCM2LQ9NUG4 571 aaPredicted RBP5.8□□□□□ -1.48
RNU6-560P-201ENST00000364007 PRSS50Q9UI38 385 aa5.8□□□□□ -1.48
RNU6-560P-201ENST00000364007 PCDHGA9Q9Y5G4 932 aaKnown RBP5.8□□□□□ -1.48
RNU6-560P-201ENST00000364007 PCDHGA8Q9Y5G5 932 aa5.8□□□□□ -1.48
RNU6-560P-201ENST00000364007 PCDHGA7Q9Y5G6 932 aa5.8□□□□□ -1.48
RNU6-560P-201ENST00000364007 PCDHGA6Q9Y5G7 932 aa5.8□□□□□ -1.48
RNU6-560P-201ENST00000364007 PCDHGA3Q9Y5H0 932 aa5.8□□□□□ -1.48
RNU6-560P-201ENST00000364007 PCDHGA2Q9Y5H1 932 aa5.8□□□□□ -1.48
RNU6-560P-201ENST00000364007 DBX1A6NMT0 343 aa5.79□□□□□ -1.48
RNU6-560P-201ENST00000364007 ZNF888P0CJ79 500 aaPredicted RBP5.79□□□□□ -1.48
RNU6-560P-201ENST00000364007 CDK17Q00537 523 aa5.79□□□□□ -1.48
RNU6-560P-201ENST00000364007 PPARAQ07869 468 aa5.79□□□□□ -1.48
RNU6-560P-201ENST00000364007 ODF1Q14990 250 aa5.79□□□□□ -1.48
RNU6-560P-201ENST00000364007 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.79□□□□□ -1.48
RNU6-560P-201ENST00000364007 GAREM2Q75VX8 874 aa5.79□□□□□ -1.48
RNU6-560P-201ENST00000364007 GPR155Q7Z3F1 870 aa5.79□□□□□ -1.48
RNU6-560P-201ENST00000364007 KCNK18Q7Z418 384 aa5.79□□□□□ -1.48
RNU6-560P-201ENST00000364007 SYT8Q8NBV8 401 aa5.79□□□□□ -1.48
RNU6-560P-201ENST00000364007 GAB3Q8WWW8 586 aa5.79□□□□□ -1.48
RNU6-560P-201ENST00000364007 MBD6Q96DN6 1003 aa5.79□□□□□ -1.48
RNU6-560P-201ENST00000364007 AJUBAQ96IF1 538 aa5.79□□□□□ -1.48
RNU6-560P-201ENST00000364007 DYDC2Q96IM9 177 aa5.79□□□□□ -1.48
RNU6-560P-201ENST00000364007 TOX2Q96NM4 488 aa5.79□□□□□ -1.48
RNU6-560P-201ENST00000364007 CEP89Q96ST8 783 aa5.79□□□□□ -1.48
RNU6-560P-201ENST00000364007 KATNBL1Q9H079 304 aa5.79□□□□□ -1.48
RNU6-560P-201ENST00000364007 DNAJC28Q9NX36 388 aa5.79□□□□□ -1.48
RNU6-560P-201ENST00000364007 SAE1Q9UBE0 346 aaPredicted RBP5.79□□□□□ -1.48
RNU6-560P-201ENST00000364007 DPP7Q9UHL4 492 aa5.79□□□□□ -1.48
RNU6-560P-201ENST00000364007 EVLQ9UI08 416 aaPredicted RBP5.79□□□□□ -1.48
RNU6-560P-201ENST00000364007 DNAI1Q9UI46 699 aa5.79□□□□□ -1.48
RNU6-560P-201ENST00000364007 FBXO10Q9UK96 956 aa5.79□□□□□ -1.48
RNU6-560P-201ENST00000364007 THRAP3Q9Y2W1 955 aaKnown RBP5.79□□□□□ -1.48
RNU6-560P-201ENST00000364007 PCDHB6Q9Y5E3 794 aa5.79□□□□□ -1.48
RNU6-560P-201ENST00000364007 SHTN1A0MZ66 631 aa5.78□□□□□ -1.48
RNU6-560P-201ENST00000364007 MROH6A6NGR9 719 aa5.78□□□□□ -1.48
RNU6-560P-201ENST00000364007 CUTAO60888 179 aa5.78□□□□□ -1.48
RNU6-560P-201ENST00000364007 HMGCRP04035 888 aa5.78□□□□□ -1.48
RNU6-560P-201ENST00000364007 RBP3P10745 1247 aa5.78□□□□□ -1.48
RNU6-560P-201ENST00000364007 OSMP13725 252 aa5.78□□□□□ -1.48
RNU6-560P-201ENST00000364007 CSF2RBP32927 897 aa5.78□□□□□ -1.48
RNU6-560P-201ENST00000364007 ETV4P43268 484 aa5.78□□□□□ -1.48
RNU6-560P-201ENST00000364007 KCNC1P48547 511 aa5.78□□□□□ -1.48
RNU6-560P-201ENST00000364007 RRADP55042 308 aa5.78□□□□□ -1.48
RNU6-560P-201ENST00000364007 CCT2P78371 535 aaKnown RBP5.78□□□□□ -1.48
RNU6-560P-201ENST00000364007 MAP3K12Q12852 859 aa5.78□□□□□ -1.48
RNU6-560P-201ENST00000364007 TTF1Q15361 905 aaPredicted RBP5.78□□□□□ -1.48
RNU6-560P-201ENST00000364007 CLUL1Q15846 466 aa5.78□□□□□ -1.48
RNU6-560P-201ENST00000364007 FAM26FQ5R3K3 315 aa5.78□□□□□ -1.48
RNU6-560P-201ENST00000364007 TRIM68Q6AZZ1 485 aa5.78□□□□□ -1.48
RNU6-560P-201ENST00000364007 BMP8AQ7Z5Y6 402 aa5.78□□□□□ -1.48
RNU6-560P-201ENST00000364007 KLHL36Q8N4N3 616 aa5.78□□□□□ -1.48
RNU6-560P-201ENST00000364007 CDYL2Q8N8U2 506 aa5.78□□□□□ -1.48
RNU6-560P-201ENST00000364007 LCORQ96JN0 433 aaPredicted RBP5.78□□□□□ -1.48
RNU6-560P-201ENST00000364007 HAPLN2Q9GZV7 340 aa5.78□□□□□ -1.48
RNU6-560P-201ENST00000364007 WNT8AQ9H1J5 351 aa5.78□□□□□ -1.48
RNU6-560P-201ENST00000364007 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.78□□□□□ -1.48
RNU6-560P-201ENST00000364007 MKS1Q9NXB0 559 aa5.78□□□□□ -1.48
RNU6-560P-201ENST00000364007 ADAM29Q9UKF5 820 aa5.78□□□□□ -1.48
RNU6-560P-201ENST00000364007 G3BP2Q9UN86 482 aaKnown RBP5.78□□□□□ -1.48
RNU6-560P-201ENST00000364007 TRIM75PA6NK02 468 aa5.77□□□□□ -1.49
RNU6-560P-201ENST00000364007 NOBOXO60393 691 aa5.77□□□□□ -1.49
RNU6-560P-201ENST00000364007 TRIM13O60858 407 aa5.77□□□□□ -1.49
RNU6-560P-201ENST00000364007 HNRNPLP14866 589 aaKnown RBP eCLIP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 179.7 ms