RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 TLR7Q9NYK1 1049 aaKnown RBP2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 FAM30AQ9NZY2 134 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 COL20A1Q9P218 1284 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 CNOT11Q9UKZ1 510 aaKnown RBP2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 A2ML1A8K2U0 1454 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 ATP7BP35670 1465 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 NAIPQ13075 1403 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 C9orf84Q5VXU9 1444 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 PSMD14O00487 310 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 NEFMP07197 916 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 IBSPP21815 317 aaPredicted RBP2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 ARSDP51689 593 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 ZNF132P52740 706 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 HDAC1Q13547 482 aaPredicted RBP2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 SPRED3Q2MJR0 410 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 COBLL1Q53SF7 1204 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 ZBTB41Q5SVQ8 909 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 UBR7Q8N806 425 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 TMEM145Q8NBT3 493 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 Q8NFD4 153 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 GPR152Q8TDT2 470 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 PTPRN2Q92932 1015 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 HSH2DQ96JZ2 352 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 BTBD6Q96KE9 485 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 FIZ1Q96SL8 496 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 SLC30A3Q99726 388 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 TSEN34Q9BSV6 310 aaKnown RBP2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 PITHD1Q9GZP4 211 aaPredicted RBP2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 MAGEH1Q9H213 219 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 MRS2Q9HD23 443 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 KRT82Q9NSB4 513 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 CCM2LQ9NUG4 571 aaPredicted RBP2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 STK32BQ9NY57 414 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 CRYL1Q9Y2S2 319 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 TULP4Q9NRJ4 1543 aa2.3□□□□□ -2.04
SMARCAD1-202ENST00000359052 PXDNQ92626 1479 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 A0A0A6YYK5 440 aaPredicted RBP2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 GJB3O75712 270 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 TIAF1O95411 115 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 FYNP06241 537 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 NAT2P11245 290 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 CST5P28325 142 aaPredicted RBP2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 LSM11P83369 360 aaKnown RBP eCLIP2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 AOC3Q16853 763 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 SOWAHCQ53LP3 525 aaPredicted RBP2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 KRTCAP3Q53RY4 240 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 FAM133BQ5BKY9 247 aaKnown RBP2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 PCDH19Q8TAB3 1148 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 SOX7Q9BT81 388 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 DCP1AQ9NPI6 582 aaPredicted RBP2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 MCM8Q9UJA3 840 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 CORINQ9Y5Q5 1042 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 B3GALT1Q9Y5Z6 326 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 DAPK1P53355 1430 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 TRBV23-1A0A0A0MS06 115 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 RNF223E7ERA6 249 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 MCF2LO15068 1137 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 ONECUT2O95948 504 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 CELA3BP08861 270 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 LORP23490 312 aaPredicted RBP2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 HTR7P34969 479 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 ARFIP1P53367 373 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 AK2P54819 239 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 AUHQ13825 339 aaKnown RBP2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 H1FNTQ75WM6 255 aaPredicted RBP2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 PDZD4Q76G19 769 aaPredicted RBP2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 RASGRP2Q7LDG7 609 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 NLRC3Q7RTR2 1065 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 FCHSD1Q86WN1 690 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 LRRC47Q8N1G4 583 aaKnown RBP2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 CRIPAKQ8N1N5 446 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 KCNN1Q92952 543 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 CEP295NLQ96MC4 621 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 CLSTN3Q9BQT9 956 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 FBLN5Q9UBX5 448 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 PADI4Q9UM07 663 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 GIT1Q9Y2X7 761 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 PCDHB1Q9Y5F3 818 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 BLMP54132 1417 aaPredicted RBP2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 FIGNL2A6NMB9 653 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 RNF113AO15541 343 aaKnown RBP2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 GPRIN2O60269 458 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 TMCC2O75069 709 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 PFKMP08237 780 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 SMPD1P17405 629 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 HDCP19113 662 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 SLC6A11P48066 632 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 TRIM32Q13049 653 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 ABCB5Q2M3G0 1257 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 TYSND1Q2T9J0 566 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 MTERF2Q49AM1 385 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 SEZ6Q53EL9 994 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 ANKRD45Q5TZF3 282 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 CD300LGQ6UXG3 332 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 CYP2U1Q7Z449 544 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 PROSER1Q86XN7 944 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 ARL8AQ96BM9 186 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 PERPQ96FX8 193 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 HIC2Q96JB3 615 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 STAC3Q96MF2 364 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms