RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 RSPH10BP0C881 870 aa19.26■□□□□ 0.67
APP-202ENST00000348990 PDE6CP51160 858 aa19.26■□□□□ 0.67
APP-202ENST00000348990 HSPA2P54652 639 aa19.26■□□□□ 0.67
APP-202ENST00000348990 KCNA1Q09470 495 aa19.26■□□□□ 0.67
APP-202ENST00000348990 DPP8Q6V1X1 898 aaPredicted RBP19.26■□□□□ 0.67
APP-202ENST00000348990 FRMD5Q7Z6J6 570 aa19.26■□□□□ 0.67
APP-202ENST00000348990 RFFLQ8WZ73 363 aa19.26■□□□□ 0.67
APP-202ENST00000348990 SETDB2Q96T68 719 aa19.26■□□□□ 0.67
APP-202ENST00000348990 STMN4Q9H169 189 aaPredicted RBP19.26■□□□□ 0.67
APP-202ENST00000348990 DHX36Q9H2U1 1008 aaKnown RBP19.26■□□□□ 0.67
APP-202ENST00000348990 BCAS3Q9H6U6 928 aa19.26■□□□□ 0.67
APP-202ENST00000348990 HOMER3Q9NSC5 361 aa19.26■□□□□ 0.67
APP-202ENST00000348990 DNAJC12Q9UKB3 198 aa19.26■□□□□ 0.67
APP-202ENST00000348990 SLIT2O94813 1529 aa19.26■□□□□ 0.67
APP-202ENST00000348990 A8MUI8 341 aa19.26■□□□□ 0.67
APP-202ENST00000348990 SUN1O94901 812 aa19.26■□□□□ 0.67
APP-202ENST00000348990 CYP2J2P51589 502 aa19.26■□□□□ 0.67
APP-202ENST00000348990 PTENP60484 403 aa19.26■□□□□ 0.67
APP-202ENST00000348990 ORC2Q13416 577 aaPredicted RBP19.26■□□□□ 0.67
APP-202ENST00000348990 BARGINQ6ZT62 677 aa19.26■□□□□ 0.67
APP-202ENST00000348990 HOOK2Q96ED9 719 aa19.26■□□□□ 0.67
APP-202ENST00000348990 THAP2Q9H0W7 228 aa19.26■□□□□ 0.67
APP-202ENST00000348990 TBK1Q9UHD2 729 aa19.26■□□□□ 0.67
APP-202ENST00000348990 FOXO6A8MYZ6 492 aa19.26■□□□□ 0.67
APP-202ENST00000348990 ALDH5A1P51649 535 aaPredicted RBP19.26■□□□□ 0.67
APP-202ENST00000348990 LACTBP83111 547 aaPredicted RBP19.26■□□□□ 0.67
APP-202ENST00000348990 ADCY2Q08462 1091 aa19.26■□□□□ 0.67
APP-202ENST00000348990 IKQ13123 557 aaPredicted RBP19.26■□□□□ 0.67
APP-202ENST00000348990 CALCOCO2Q13137 446 aa19.26■□□□□ 0.67
APP-202ENST00000348990 EDRF1Q3B7T1 1238 aa19.26■□□□□ 0.67
APP-202ENST00000348990 ATP8B4Q8TF62 1192 aa19.26■□□□□ 0.67
APP-202ENST00000348990 ARHGEF26Q96DR7 871 aa19.26■□□□□ 0.67
APP-202ENST00000348990 HES6Q96HZ4 224 aa19.26■□□□□ 0.67
APP-202ENST00000348990 C15orf41Q9Y2V0 281 aa19.26■□□□□ 0.67
APP-202ENST00000348990 BTNL10A8MVZ5 291 aa19.25■□□□□ 0.67
APP-202ENST00000348990 ASAP2O43150 1006 aa19.25■□□□□ 0.67
APP-202ENST00000348990 NQO1P15559 274 aaKnown RBP19.25■□□□□ 0.67
APP-202ENST00000348990 RFC4P35249 363 aa19.25■□□□□ 0.67
APP-202ENST00000348990 PPP4R3CPQ6ZMV5 832 aa19.25■□□□□ 0.67
APP-202ENST00000348990 SPICE1Q8N0Z3 855 aa19.25■□□□□ 0.67
APP-202ENST00000348990 RASGEF1CQ8N431 466 aa19.25■□□□□ 0.67
APP-202ENST00000348990 MAGEC3Q8TD91 643 aa19.25■□□□□ 0.67
APP-202ENST00000348990 REEP2Q9BRK0 252 aa19.25■□□□□ 0.67
APP-202ENST00000348990 LMNB1P20700 586 aa19.25■□□□□ 0.67
APP-202ENST00000348990 MMP13P45452 471 aa19.25■□□□□ 0.67
APP-202ENST00000348990 VPS41P49754 854 aa19.25■□□□□ 0.67
APP-202ENST00000348990 TBC1D9BQ66K14 1250 aa19.25■□□□□ 0.67
APP-202ENST00000348990 ADGRF4Q8IZF3 695 aa19.25■□□□□ 0.67
APP-202ENST00000348990 TRIM33Q9UPN9 1127 aa19.25■□□□□ 0.67
APP-202ENST00000348990 ADAMTSL3P82987 1691 aa19.25■□□□□ 0.67
APP-202ENST00000348990 IGSF9BQ9UPX0 1349 aa19.24■□□□□ 0.67
APP-202ENST00000348990 CFAP73A6NFT4 308 aa19.24■□□□□ 0.67
APP-202ENST00000348990 USP17L10C9JJH3 530 aa19.24■□□□□ 0.67
APP-202ENST00000348990 MAPK7Q13164 816 aa19.24■□□□□ 0.67
APP-202ENST00000348990 ITIH4Q14624 930 aa19.24■□□□□ 0.67
APP-202ENST00000348990 DUPD1Q68J44 220 aa19.24■□□□□ 0.67
APP-202ENST00000348990 ZNF746Q6NUN9 644 aaPredicted RBP19.24■□□□□ 0.67
APP-202ENST00000348990 LNX1Q8TBB1 728 aaPredicted RBP19.24■□□□□ 0.67
APP-202ENST00000348990 BHMT2Q9H2M3 363 aa19.24■□□□□ 0.67
APP-202ENST00000348990 TAS2R14Q9NYV8 317 aa19.24■□□□□ 0.67
APP-202ENST00000348990 ESYT2A0FGR8 921 aa19.24■□□□□ 0.67
APP-202ENST00000348990 ENO4A6NNW6 628 aa19.24■□□□□ 0.67
APP-202ENST00000348990 TRIM49P0CI25 452 aa19.24■□□□□ 0.67
APP-202ENST00000348990 TRIM49CP0CI26 452 aa19.24■□□□□ 0.67
APP-202ENST00000348990 ATP11AP98196 1134 aa19.24■□□□□ 0.67
APP-202ENST00000348990 ATXN2LQ8WWM7 1075 aaKnown RBP19.24■□□□□ 0.67
APP-202ENST00000348990 ALG3Q92685 438 aa19.24■□□□□ 0.67
APP-202ENST00000348990 ARHGEF2Q92974 986 aaKnown RBP19.24■□□□□ 0.67
APP-202ENST00000348990 USP15Q9Y4E8 981 aaPredicted RBP19.24■□□□□ 0.67
APP-202ENST00000348990 CACNA1SQ13698 1873 aa19.24■□□□□ 0.67
APP-202ENST00000348990 MYH1P12882 1939 aa19.24■□□□□ 0.67
APP-202ENST00000348990 MYH4Q9Y623 1939 aa19.24■□□□□ 0.67
APP-202ENST00000348990 AGTP01019 485 aa19.24■□□□□ 0.67
APP-202ENST00000348990 RPL21P46778 160 aaKnown RBP19.24■□□□□ 0.67
APP-202ENST00000348990 EPHA7Q15375 998 aa19.24■□□□□ 0.67
APP-202ENST00000348990 SEL1L2Q5TEA6 688 aa19.24■□□□□ 0.67
APP-202ENST00000348990 CCDC137Q6PK04 289 aaKnown RBP19.24■□□□□ 0.67
APP-202ENST00000348990 FAM186BQ8IYM0 893 aa19.24■□□□□ 0.67
APP-202ENST00000348990 UBL4BQ8N7F7 174 aa19.24■□□□□ 0.67
APP-202ENST00000348990 ZNF622Q969S3 477 aaKnown RBP eCLIP19.24■□□□□ 0.67
APP-202ENST00000348990 CENPTQ96BT3 561 aa19.24■□□□□ 0.67
APP-202ENST00000348990 IFT74Q96LB3 600 aa19.24■□□□□ 0.67
APP-202ENST00000348990 METTL14Q9HCE5 456 aaKnown RBP19.24■□□□□ 0.67
APP-202ENST00000348990 THRAP3Q9Y2W1 955 aaKnown RBP19.24■□□□□ 0.67
APP-202ENST00000348990 SNX1Q13596 522 aa19.23■□□□□ 0.67
APP-202ENST00000348990 DDB1Q16531 1140 aa19.23■□□□□ 0.67
APP-202ENST00000348990 ARSHQ5FYA8 562 aa19.23■□□□□ 0.67
APP-202ENST00000348990 DCAF12L1Q5VU92 463 aa19.23■□□□□ 0.67
APP-202ENST00000348990 MYCT1Q8N699 235 aa19.23■□□□□ 0.67
APP-202ENST00000348990 ERMNQ8TAM6 284 aa19.23■□□□□ 0.67
APP-202ENST00000348990 PGM2Q96G03 612 aa19.23■□□□□ 0.67
APP-202ENST00000348990 FAXDC2Q96IV6 333 aa19.23■□□□□ 0.67
APP-202ENST00000348990 PNMA3Q9UL41 463 aa19.23■□□□□ 0.67
APP-202ENST00000348990 STXBP5LQ9Y2K9 1186 aa19.23■□□□□ 0.67
APP-202ENST00000348990 ALG6Q9Y672 507 aa19.23■□□□□ 0.67
APP-202ENST00000348990 ZNF142P52746 1687 aaPredicted RBP19.23■□□□□ 0.67
APP-202ENST00000348990 PLCH1Q4KWH8 1693 aa19.23■□□□□ 0.67
APP-202ENST00000348990 SPOPO43791 374 aa19.23■□□□□ 0.67
APP-202ENST00000348990 CALRP27797 417 aaKnown RBP19.23■□□□□ 0.67
APP-202ENST00000348990 TRIP13Q15645 432 aaPredicted RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms