RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 STRA6Q9BX79 667 aa16.22■□□□□ 0.19
CXCL12-201ENST00000343575 NRBP1Q9UHY1 535 aa16.22■□□□□ 0.19
CXCL12-201ENST00000343575 TSKSQ9UJT2 592 aa16.22■□□□□ 0.19
CXCL12-201ENST00000343575 PSMA7O14818 248 aa16.21■□□□□ 0.19
CXCL12-201ENST00000343575 ZNF286BP0CG31 522 aa16.21■□□□□ 0.19
CXCL12-201ENST00000343575 ZCWPW2Q504Y3 356 aa16.21■□□□□ 0.19
CXCL12-201ENST00000343575 HSP90AA4PQ58FG1 418 aa16.21■□□□□ 0.19
CXCL12-201ENST00000343575 ZNF720Q7Z2F6 126 aa16.21■□□□□ 0.19
CXCL12-201ENST00000343575 CCDC186Q7Z3E2 898 aa16.21■□□□□ 0.19
CXCL12-201ENST00000343575 TLK2Q86UE8 772 aa16.21■□□□□ 0.19
CXCL12-201ENST00000343575 IRF2BP1Q8IU81 584 aa16.21■□□□□ 0.19
CXCL12-201ENST00000343575 DRC7Q8IY82 874 aa16.21■□□□□ 0.19
CXCL12-201ENST00000343575 BSNDQ8WZ55 320 aa16.21■□□□□ 0.19
CXCL12-201ENST00000343575 P2RX5Q93086 422 aa16.21■□□□□ 0.19
CXCL12-201ENST00000343575 CCDC43Q96MW1 224 aaKnown RBP16.21■□□□□ 0.19
CXCL12-201ENST00000343575 TIPINQ9BVW5 301 aa16.21■□□□□ 0.19
CXCL12-201ENST00000343575 KCTD10Q9H3F6 313 aa16.21■□□□□ 0.19
CXCL12-201ENST00000343575 NRBP2Q9NSY0 501 aa16.21■□□□□ 0.19
CXCL12-201ENST00000343575 SEL1LQ9UBV2 794 aa16.21■□□□□ 0.19
CXCL12-201ENST00000343575 FAM184BQ9ULE4 1060 aa16.21■□□□□ 0.19
CXCL12-201ENST00000343575 KIF2AO00139 706 aaPredicted RBP16.2■□□□□ 0.18
CXCL12-201ENST00000343575 FKTNO75072 461 aa16.2■□□□□ 0.18
CXCL12-201ENST00000343575 PPP1R37O75864 691 aa16.2■□□□□ 0.18
CXCL12-201ENST00000343575 PLS3P13797 630 aa16.2■□□□□ 0.18
CXCL12-201ENST00000343575 TNNT1P13805 278 aa16.2■□□□□ 0.18
CXCL12-201ENST00000343575 SLC26A2P50443 739 aa16.2■□□□□ 0.18
CXCL12-201ENST00000343575 ZC2HC1CQ53FD0 456 aaPredicted RBP16.2■□□□□ 0.18
CXCL12-201ENST00000343575 ODR4Q5SWX8 454 aa16.2■□□□□ 0.18
CXCL12-201ENST00000343575 FAM102BQ5T8I3 360 aa16.2■□□□□ 0.18
CXCL12-201ENST00000343575 CDKAL1Q5VV42 579 aa16.2■□□□□ 0.18
CXCL12-201ENST00000343575 MFSD14CQ5VZR4 134 aa16.2■□□□□ 0.18
CXCL12-201ENST00000343575 SARM1Q6SZW1 724 aa16.2■□□□□ 0.18
CXCL12-201ENST00000343575 MYOCDQ8IZQ8 938 aa16.2■□□□□ 0.18
CXCL12-201ENST00000343575 FAM167AQ96KS9 214 aa16.2■□□□□ 0.18
CXCL12-201ENST00000343575 MRPL44Q9H9J2 332 aaKnown RBP16.2■□□□□ 0.18
CXCL12-201ENST00000343575 PRPF6O94906 941 aaKnown RBP16.2■□□□□ 0.18
CXCL12-201ENST00000343575 STIM1Q13586 685 aa16.2■□□□□ 0.18
CXCL12-201ENST00000343575 EMC2Q15006 297 aa16.2■□□□□ 0.18
CXCL12-201ENST00000343575 BMT2Q1RMZ1 405 aa16.2■□□□□ 0.18
CXCL12-201ENST00000343575 ZNF507Q8TCN5 953 aa16.2■□□□□ 0.18
CXCL12-201ENST00000343575 TRAPPC12Q8WVT3 735 aa16.2■□□□□ 0.18
CXCL12-201ENST00000343575 TRIM5Q9C035 493 aa16.2■□□□□ 0.18
CXCL12-201ENST00000343575 IKZF4Q9H2S9 585 aa16.2■□□□□ 0.18
CXCL12-201ENST00000343575 ERAP1Q9NZ08 941 aa16.2■□□□□ 0.18
CXCL12-201ENST00000343575 Q9Y3F1 56 aa16.2■□□□□ 0.18
CXCL12-201ENST00000343575 H3BRB1 525 aa16.19■□□□□ 0.18
CXCL12-201ENST00000343575 MAFO75444 373 aaPredicted RBP16.19■□□□□ 0.18
CXCL12-201ENST00000343575 AKR1A1P14550 325 aa16.19■□□□□ 0.18
CXCL12-201ENST00000343575 PPP1R2P41236 205 aa16.19■□□□□ 0.18
CXCL12-201ENST00000343575 C1QTNF8P60827 252 aa16.19■□□□□ 0.18
CXCL12-201ENST00000343575 MKRN4PQ13434 485 aaPredicted RBP16.19■□□□□ 0.18
CXCL12-201ENST00000343575 DRP2Q13474 957 aa16.19■□□□□ 0.18
CXCL12-201ENST00000343575 DGKDQ16760 1214 aa16.19■□□□□ 0.18
CXCL12-201ENST00000343575 APTXQ7Z2E3 356 aaKnown RBP16.19■□□□□ 0.18
CXCL12-201ENST00000343575 KSR1Q8IVT5 923 aa16.19■□□□□ 0.18
CXCL12-201ENST00000343575 NELFCDQ8IXH7 590 aa16.19■□□□□ 0.18
CXCL12-201ENST00000343575 KAT2BQ92831 832 aa16.19■□□□□ 0.18
CXCL12-201ENST00000343575 EEF2KMTQ96G04 330 aa16.19■□□□□ 0.18
CXCL12-201ENST00000343575 TUT1Q9H6E5 874 aaKnown RBP16.19■□□□□ 0.18
CXCL12-201ENST00000343575 ATP6V0A4Q9HBG4 840 aa16.19■□□□□ 0.18
CXCL12-201ENST00000343575 IGKV6-21A0A0C4DH24 114 aa16.18■□□□□ 0.18
CXCL12-201ENST00000343575 MYADML2A6NDP7 307 aa16.18■□□□□ 0.18
CXCL12-201ENST00000343575 ADCY3O60266 1144 aa16.18■□□□□ 0.18
CXCL12-201ENST00000343575 GCNT3O95395 438 aa16.18■□□□□ 0.18
CXCL12-201ENST00000343575 CCND3P30281 292 aaPredicted RBP16.18■□□□□ 0.18
CXCL12-201ENST00000343575 MAP3K21Q5TCX8 1036 aa16.18■□□□□ 0.18
CXCL12-201ENST00000343575 FAM178BQ8IXR5 827 aa16.18■□□□□ 0.18
CXCL12-201ENST00000343575 MCPH1Q8NEM0 835 aa16.18■□□□□ 0.18
CXCL12-201ENST00000343575 TMEM143Q96AN5 459 aa16.18■□□□□ 0.18
CXCL12-201ENST00000343575 ZBTB10Q96DT7 871 aa16.18■□□□□ 0.18
CXCL12-201ENST00000343575 ERO1AQ96HE7 468 aa16.18■□□□□ 0.18
CXCL12-201ENST00000343575 DRC1Q96MC2 740 aa16.18■□□□□ 0.18
CXCL12-201ENST00000343575 NTPCRQ9BSD7 190 aaKnown RBP16.18■□□□□ 0.18
CXCL12-201ENST00000343575 KCND1Q9NSA2 647 aa16.18■□□□□ 0.18
CXCL12-201ENST00000343575 LARSQ9P2J5 1176 aaKnown RBP16.18■□□□□ 0.18
CXCL12-201ENST00000343575 ZMYM2Q9UBW7 1377 aa16.18■□□□□ 0.18
CXCL12-201ENST00000343575 BRCA2P51587 3418 aa16.18■□□□□ 0.18
CXCL12-201ENST00000343575 HBP1O60381 514 aa16.18■□□□□ 0.18
CXCL12-201ENST00000343575 DUSP11O75319 330 aaKnown RBP16.18■□□□□ 0.18
CXCL12-201ENST00000343575 GNRH1P01148 92 aa16.18■□□□□ 0.18
CXCL12-201ENST00000343575 INSRRP14616 1297 aa16.18■□□□□ 0.18
CXCL12-201ENST00000343575 HOXD10P28358 340 aa16.18■□□□□ 0.18
CXCL12-201ENST00000343575 ARL2P36404 184 aa16.18■□□□□ 0.18
CXCL12-201ENST00000343575 NPTX2P47972 431 aa16.18■□□□□ 0.18
CXCL12-201ENST00000343575 POLGP54098 1239 aaPredicted RBP16.18■□□□□ 0.18
CXCL12-201ENST00000343575 PEX3P56589 373 aa16.18■□□□□ 0.18
CXCL12-201ENST00000343575 BEX3Q00994 111 aa16.18■□□□□ 0.18
CXCL12-201ENST00000343575 KIFAP3Q92845 792 aa16.18■□□□□ 0.18
CXCL12-201ENST00000343575 MRFAP1L1Q96HT8 127 aa16.18■□□□□ 0.18
CXCL12-201ENST00000343575 ADGRA3Q8IWK6 1321 aa16.18■□□□□ 0.18
CXCL12-201ENST00000343575 SPDYE4A6NLX3 237 aa16.17■□□□□ 0.18
CXCL12-201ENST00000343575 EIF3DO15371 548 aaKnown RBP eCLIP16.17■□□□□ 0.18
CXCL12-201ENST00000343575 SEPT4O43236 478 aa16.17■□□□□ 0.18
CXCL12-201ENST00000343575 TGFB1I1O43294 461 aa16.17■□□□□ 0.18
CXCL12-201ENST00000343575 TUBB4AP04350 444 aa16.17■□□□□ 0.18
CXCL12-201ENST00000343575 MAPTP10636 758 aaKnown RBP16.17■□□□□ 0.18
CXCL12-201ENST00000343575 PRKAR2AP13861 404 aaKnown RBP16.17■□□□□ 0.18
CXCL12-201ENST00000343575 RFC5P40937 340 aa16.17■□□□□ 0.18
CXCL12-201ENST00000343575 NCKAP1LP55160 1127 aa16.17■□□□□ 0.18
CXCL12-201ENST00000343575 RTP1P59025 263 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 145.4 ms