RNA–Protein interactions for RNA: ENST00000341259.6

SH2B3-201, Transcript of SH2B adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2B3, Length 5,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-201ENST00000341259 ENTPD3O75355 529 aa20.74■□□□□ 0.91
SH2B3-201ENST00000341259 ZMYND12Q9H0C1 365 aa20.74■□□□□ 0.91
SH2B3-201ENST00000341259 RGL1Q9NZL6 768 aa20.74■□□□□ 0.91
SH2B3-201ENST00000341259 PSMA2P25787 234 aa20.74■□□□□ 0.91
SH2B3-201ENST00000341259 FRMD5Q7Z6J6 570 aa20.74■□□□□ 0.91
SH2B3-201ENST00000341259 MAP3K14Q99558 947 aa20.74■□□□□ 0.91
SH2B3-201ENST00000341259 ZWILCHQ9H900 591 aa20.74■□□□□ 0.91
SH2B3-201ENST00000341259 SLIT1O75093 1534 aa20.74■□□□□ 0.91
SH2B3-201ENST00000341259 NCK2O43639 380 aa20.74■□□□□ 0.91
SH2B3-201ENST00000341259 ZNF394Q53GI3 561 aa20.74■□□□□ 0.91
SH2B3-201ENST00000341259 MSH2P43246 934 aa20.73■□□□□ 0.91
SH2B3-201ENST00000341259 SAAL1Q96ER3 474 aa20.73■□□□□ 0.91
SH2B3-201ENST00000341259 RSRC2Q7L4I2 434 aaKnown RBP20.73■□□□□ 0.91
SH2B3-201ENST00000341259 CATSPER4Q7RTX7 472 aa20.73■□□□□ 0.91
SH2B3-201ENST00000341259 SIX6OS1Q8N1H7 587 aa20.73■□□□□ 0.91
SH2B3-201ENST00000341259 ARHGEF18Q6ZSZ5 1173 aa20.73■□□□□ 0.91
SH2B3-201ENST00000341259 USP49Q70CQ1 688 aa20.73■□□□□ 0.91
SH2B3-201ENST00000341259 CCDC197Q8NCU1 140 aa20.73■□□□□ 0.91
SH2B3-201ENST00000341259 SYNGAP1Q96PV0 1343 aa20.73■□□□□ 0.91
SH2B3-201ENST00000341259 GPR75-ASB3A0A0A6YYF3 556 aa20.73■□□□□ 0.91
SH2B3-201ENST00000341259 RHOBTB3O94955 611 aa20.73■□□□□ 0.91
SH2B3-201ENST00000341259 LIG3P49916 1009 aa20.73■□□□□ 0.91
SH2B3-201ENST00000341259 TNFAIP2Q03169 654 aa20.73■□□□□ 0.91
SH2B3-201ENST00000341259 MTF1Q14872 753 aa20.73■□□□□ 0.91
SH2B3-201ENST00000341259 ZNF568Q3ZCX4 644 aa20.73■□□□□ 0.91
SH2B3-201ENST00000341259 NFRKBQ6P4R8 1299 aa20.73■□□□□ 0.91
SH2B3-201ENST00000341259 TMEM270Q6UE05 265 aa20.73■□□□□ 0.91
SH2B3-201ENST00000341259 PASD1Q8IV76 773 aa20.73■□□□□ 0.91
SH2B3-201ENST00000341259 RNF10Q8N5U6 811 aaKnown RBP20.73■□□□□ 0.91
SH2B3-201ENST00000341259 AFG3L2Q9Y4W6 797 aa20.73■□□□□ 0.91
SH2B3-201ENST00000341259 PDE1BQ01064 536 aa20.72■□□□□ 0.91
SH2B3-201ENST00000341259 MTMR2Q13614 643 aa20.72■□□□□ 0.91
SH2B3-201ENST00000341259 GSDMBQ8TAX9 411 aa20.72■□□□□ 0.91
SH2B3-201ENST00000341259 CALR3Q96L12 384 aaKnown RBP20.72■□□□□ 0.91
SH2B3-201ENST00000341259 OSBPL9Q96SU4 736 aa20.72■□□□□ 0.91
SH2B3-201ENST00000341259 NOVA2Q9UNW9 492 aaKnown RBP20.72■□□□□ 0.91
SH2B3-201ENST00000341259 SALL3Q9BXA9 1300 aa20.72■□□□□ 0.91
SH2B3-201ENST00000341259 PDXKO00764 312 aa20.72■□□□□ 0.91
SH2B3-201ENST00000341259 TRIM49P0CI25 452 aa20.72■□□□□ 0.91
SH2B3-201ENST00000341259 TRIM49CP0CI26 452 aa20.72■□□□□ 0.91
SH2B3-201ENST00000341259 PHKA2P46019 1235 aa20.72■□□□□ 0.91
SH2B3-201ENST00000341259 ZNF699Q32M78 642 aa20.72■□□□□ 0.91
SH2B3-201ENST00000341259 SUN1O94901 812 aa20.72■□□□□ 0.91
SH2B3-201ENST00000341259 HDAC6Q9UBN7 1215 aa20.72■□□□□ 0.91
SH2B3-201ENST00000341259 MYL3P08590 195 aa20.72■□□□□ 0.91
SH2B3-201ENST00000341259 NMT1P30419 496 aaKnown RBP20.72■□□□□ 0.91
SH2B3-201ENST00000341259 NXNQ6DKJ4 435 aa20.72■□□□□ 0.91
SH2B3-201ENST00000341259 ZNF70Q9UC06 446 aaPredicted RBP20.72■□□□□ 0.91
SH2B3-201ENST00000341259 GPC3P51654 580 aa20.71■□□□□ 0.91
SH2B3-201ENST00000341259 HSPH1Q92598 858 aa20.71■□□□□ 0.91
SH2B3-201ENST00000341259 NCOA3Q9Y6Q9 1424 aa20.71■□□□□ 0.91
SH2B3-201ENST00000341259 RASGRF2O14827 1237 aa20.71■□□□□ 0.91
SH2B3-201ENST00000341259 SRGAP2BP0DMP2 458 aa20.71■□□□□ 0.91
SH2B3-201ENST00000341259 EIF3BP55884 814 aaKnown RBP20.71■□□□□ 0.91
SH2B3-201ENST00000341259 KRT39Q6A163 491 aa20.71■□□□□ 0.91
SH2B3-201ENST00000341259 OR6B3Q8NGW1 331 aa20.71■□□□□ 0.91
SH2B3-201ENST00000341259 PSPC1Q8WXF1 523 aaKnown RBP20.71■□□□□ 0.91
SH2B3-201ENST00000341259 MROH1Q8NDA8 1641 aa20.71■□□□□ 0.91
SH2B3-201ENST00000341259 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.71■□□□□ 0.91
SH2B3-201ENST00000341259 CNOT10Q9H9A5 744 aaKnown RBP20.71■□□□□ 0.91
SH2B3-201ENST00000341259 TBK1Q9UHD2 729 aa20.71■□□□□ 0.91
SH2B3-201ENST00000341259 MAD2L2Q9UI95 211 aa20.71■□□□□ 0.91
SH2B3-201ENST00000341259 ECE1P42892 770 aa20.71■□□□□ 0.91
SH2B3-201ENST00000341259 HMGCS2P54868 508 aa20.71■□□□□ 0.91
SH2B3-201ENST00000341259 CCZ1BP86790 482 aa20.71■□□□□ 0.91
SH2B3-201ENST00000341259 CCZ1P86791 482 aaPredicted RBP20.71■□□□□ 0.91
SH2B3-201ENST00000341259 PCDHA10Q9Y5I2 948 aa20.71■□□□□ 0.91
SH2B3-201ENST00000341259 YWHABP31946 246 aaKnown RBP20.71■□□□□ 0.91
SH2B3-201ENST00000341259 JMJD4Q9H9V9 463 aa20.71■□□□□ 0.91
SH2B3-201ENST00000341259 DCCP43146 1447 aa20.7■□□□□ 0.91
SH2B3-201ENST00000341259 CDO1Q16878 200 aa20.7■□□□□ 0.9
SH2B3-201ENST00000341259 CC2D1AQ6P1N0 951 aaPredicted RBP20.7■□□□□ 0.9
SH2B3-201ENST00000341259 ARMCX2Q7L311 632 aa20.7■□□□□ 0.9
SH2B3-201ENST00000341259 HAUS6Q7Z4H7 955 aa20.7■□□□□ 0.9
SH2B3-201ENST00000341259 TMEM35BQ8NCS4 154 aa20.7■□□□□ 0.9
SH2B3-201ENST00000341259 EXOC4Q96A65 974 aa20.7■□□□□ 0.9
SH2B3-201ENST00000341259 OTUD5Q96G74 571 aa20.7■□□□□ 0.9
SH2B3-201ENST00000341259 MRFAP1Q9Y605 127 aa20.7■□□□□ 0.9
SH2B3-201ENST00000341259 PODXLO00592 558 aa20.7■□□□□ 0.9
SH2B3-201ENST00000341259 NOL3O60936 208 aaKnown RBP20.7■□□□□ 0.9
SH2B3-201ENST00000341259 NR1D1P20393 614 aa20.7■□□□□ 0.9
SH2B3-201ENST00000341259 RNASELQ05823 741 aaKnown RBP20.7■□□□□ 0.9
SH2B3-201ENST00000341259 RHPN2Q8IUC4 686 aa20.7■□□□□ 0.9
SH2B3-201ENST00000341259 MMP19Q99542 508 aa20.7■□□□□ 0.9
SH2B3-201ENST00000341259 IPO11Q9UI26 975 aaKnown RBP20.7■□□□□ 0.9
SH2B3-201ENST00000341259 A0A1B0GUA9 196 aa20.7■□□□□ 0.9
SH2B3-201ENST00000341259 RFX1P22670 979 aa20.7■□□□□ 0.9
SH2B3-201ENST00000341259 GPD1LQ8N335 351 aa20.7■□□□□ 0.9
SH2B3-201ENST00000341259 DDX23Q9BUQ8 820 aaKnown RBP20.7■□□□□ 0.9
SH2B3-201ENST00000341259 NUP85Q9BW27 656 aa20.7■□□□□ 0.9
SH2B3-201ENST00000341259 SLC9A2Q9UBY0 812 aa20.7■□□□□ 0.9
SH2B3-201ENST00000341259 ATP8B3O60423 1300 aa20.7■□□□□ 0.9
SH2B3-201ENST00000341259 EMSYQ7Z589 1322 aa20.7■□□□□ 0.9
SH2B3-201ENST00000341259 IFT88Q13099 833 aa20.7■□□□□ 0.9
SH2B3-201ENST00000341259 TTLL4Q14679 1199 aa20.7■□□□□ 0.9
SH2B3-201ENST00000341259 RSBN1LQ6PCB5 846 aaPredicted RBP20.7■□□□□ 0.9
SH2B3-201ENST00000341259 VCX3BQ9H321 246 aa20.7■□□□□ 0.9
SH2B3-201ENST00000341259 EFCC1Q9HA90 598 aa20.7■□□□□ 0.9
SH2B3-201ENST00000341259 PLAAQ9Y263 795 aa20.7■□□□□ 0.9
SH2B3-201ENST00000341259 TBX3O15119 743 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms