RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 PLCB1Q9NQ66 1216 aa20.46■□□□□ 0.87
PSPC1-201ENST00000338910 RBAK-RBAKDNI3L0D1 243 aa20.45■□□□□ 0.86
PSPC1-201ENST00000338910 CYP3A4P08684 503 aa20.45■□□□□ 0.86
PSPC1-201ENST00000338910 RPA1P27694 616 aa20.45■□□□□ 0.86
PSPC1-201ENST00000338910 SLC12A3P55017 1021 aa20.45■□□□□ 0.86
PSPC1-201ENST00000338910 LRRC63Q05C16 580 aa20.45■□□□□ 0.86
PSPC1-201ENST00000338910 HGSNATQ68CP4 663 aa20.45■□□□□ 0.86
PSPC1-201ENST00000338910 CCDC121Q6ZUS5 278 aa20.45■□□□□ 0.86
PSPC1-201ENST00000338910 MAATS1Q7Z4T9 603 aa20.45■□□□□ 0.86
PSPC1-201ENST00000338910 INPP4AQ96PE3 977 aaPredicted RBP20.45■□□□□ 0.86
PSPC1-201ENST00000338910 PPANQ9NQ55 473 aaKnown RBP20.45■□□□□ 0.86
PSPC1-201ENST00000338910 SLC12A6Q9UHW9 1150 aa20.45■□□□□ 0.86
PSPC1-201ENST00000338910 DNM3Q9UQ16 869 aa20.45■□□□□ 0.86
PSPC1-201ENST00000338910 HPDP32754 393 aaPredicted RBP20.45■□□□□ 0.86
PSPC1-201ENST00000338910 CDR1P51861 262 aa20.45■□□□□ 0.86
PSPC1-201ENST00000338910 DGKZQ13574 1117 aa20.45■□□□□ 0.86
PSPC1-201ENST00000338910 PRAMEF18Q5VWM3 479 aa20.45■□□□□ 0.86
PSPC1-201ENST00000338910 LRIG3Q6UXM1 1119 aa20.45■□□□□ 0.86
PSPC1-201ENST00000338910 NELFCDQ8IXH7 590 aa20.45■□□□□ 0.86
PSPC1-201ENST00000338910 OSBPL7Q9BZF2 842 aa20.45■□□□□ 0.86
PSPC1-201ENST00000338910 DDX20Q9UHI6 824 aaKnown RBP20.45■□□□□ 0.86
PSPC1-201ENST00000338910 IGLV3-22A0A075B6J6 115 aa20.44■□□□□ 0.86
PSPC1-201ENST00000338910 MYBP10242 640 aa20.44■□□□□ 0.86
PSPC1-201ENST00000338910 MAN2A1Q16706 1144 aa20.44■□□□□ 0.86
PSPC1-201ENST00000338910 PDXDC1Q6P996 788 aa20.44■□□□□ 0.86
PSPC1-201ENST00000338910 LDHDQ86WU2 507 aa20.44■□□□□ 0.86
PSPC1-201ENST00000338910 CCDC114Q96M63 670 aa20.44■□□□□ 0.86
PSPC1-201ENST00000338910 FEM1BQ9UK73 627 aa20.44■□□□□ 0.86
PSPC1-201ENST00000338910 VAV3Q9UKW4 847 aa20.44■□□□□ 0.86
PSPC1-201ENST00000338910 GMNCA6NCL1 334 aa20.44■□□□□ 0.86
PSPC1-201ENST00000338910 EML1O00423 815 aa20.44■□□□□ 0.86
PSPC1-201ENST00000338910 SPRED3Q2MJR0 410 aa20.44■□□□□ 0.86
PSPC1-201ENST00000338910 FAM160B2Q86V87 743 aa20.44■□□□□ 0.86
PSPC1-201ENST00000338910 FUKQ8N0W3 1084 aa20.44■□□□□ 0.86
PSPC1-201ENST00000338910 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.44■□□□□ 0.86
PSPC1-201ENST00000338910 TSG101Q99816 390 aa20.44■□□□□ 0.86
PSPC1-201ENST00000338910 WDR18Q9BV38 432 aa20.44■□□□□ 0.86
PSPC1-201ENST00000338910 CENPHQ9H3R5 247 aa20.44■□□□□ 0.86
PSPC1-201ENST00000338910 RGL1Q9NZL6 768 aa20.44■□□□□ 0.86
PSPC1-201ENST00000338910 MRPL11Q9Y3B7 192 aaKnown RBP20.44■□□□□ 0.86
PSPC1-201ENST00000338910 ABCB11O95342 1321 aa20.43■□□□□ 0.86
PSPC1-201ENST00000338910 ATAD5Q96QE3 1844 aa20.43■□□□□ 0.86
PSPC1-201ENST00000338910 GOLGA6L7A0A1B0GV03 622 aa20.43■□□□□ 0.86
PSPC1-201ENST00000338910 GOLGA6L10A6NI86 522 aa20.43■□□□□ 0.86
PSPC1-201ENST00000338910 H0YGN5 161 aa20.43■□□□□ 0.86
PSPC1-201ENST00000338910 RAD51CO43502 376 aa20.43■□□□□ 0.86
PSPC1-201ENST00000338910 TRAPPC3O43617 180 aa20.43■□□□□ 0.86
PSPC1-201ENST00000338910 PALMO75781 387 aa20.43■□□□□ 0.86
PSPC1-201ENST00000338910 FGFR1OPO95684 399 aaKnown RBP20.43■□□□□ 0.86
PSPC1-201ENST00000338910 SNCBQ16143 134 aa20.43■□□□□ 0.86
PSPC1-201ENST00000338910 CYB5D1Q6P9G0 228 aa20.43■□□□□ 0.86
PSPC1-201ENST00000338910 LRRC55Q6ZSA7 311 aa20.43■□□□□ 0.86
PSPC1-201ENST00000338910 BANK1Q8NDB2 785 aa20.43■□□□□ 0.86
PSPC1-201ENST00000338910 AGBL1Q96MI9 1066 aa20.43■□□□□ 0.86
PSPC1-201ENST00000338910 ODF2LQ9ULJ1 636 aa20.43■□□□□ 0.86
PSPC1-201ENST00000338910 PCDHA2Q9Y5H9 948 aa20.43■□□□□ 0.86
PSPC1-201ENST00000338910 NFS1Q9Y697 457 aa20.43■□□□□ 0.86
PSPC1-201ENST00000338910 TMCO5BA8MYB1 307 aa20.43■□□□□ 0.86
PSPC1-201ENST00000338910 DNM1LO00429 736 aa20.43■□□□□ 0.86
PSPC1-201ENST00000338910 TRAF5O00463 557 aa20.43■□□□□ 0.86
PSPC1-201ENST00000338910 CTNND1O60716 968 aaKnown RBP20.43■□□□□ 0.86
PSPC1-201ENST00000338910 NF2P35240 595 aa20.43■□□□□ 0.86
PSPC1-201ENST00000338910 ANGEL2Q5VTE6 544 aaKnown RBP20.43■□□□□ 0.86
PSPC1-201ENST00000338910 ARHGAP27Q6ZUM4 889 aa20.43■□□□□ 0.86
PSPC1-201ENST00000338910 FAM228AQ86W67 206 aa20.43■□□□□ 0.86
PSPC1-201ENST00000338910 PARP9Q8IXQ6 854 aa20.43■□□□□ 0.86
PSPC1-201ENST00000338910 EIF1ADQ8N9N8 165 aaKnown RBP20.43■□□□□ 0.86
PSPC1-201ENST00000338910 TAF1DQ9H5J8 278 aaPredicted RBP20.43■□□□□ 0.86
PSPC1-201ENST00000338910 FZD1Q9UP38 647 aa20.43■□□□□ 0.86
PSPC1-201ENST00000338910 SLC26A4O43511 780 aa20.42■□□□□ 0.86
PSPC1-201ENST00000338910 CHMP2AO43633 222 aa20.42■□□□□ 0.86
PSPC1-201ENST00000338910 PLA2G6O60733 806 aa20.42■□□□□ 0.86
PSPC1-201ENST00000338910 MAGEC3Q8TD91 643 aa20.42■□□□□ 0.86
PSPC1-201ENST00000338910 N4BP2L2Q92802 583 aaPredicted RBP20.42■□□□□ 0.86
PSPC1-201ENST00000338910 SGSM3Q96HU1 749 aa20.42■□□□□ 0.86
PSPC1-201ENST00000338910 EIF2AK1Q9BQI3 630 aaKnown RBP20.42■□□□□ 0.86
PSPC1-201ENST00000338910 EDEM3Q9BZQ6 932 aa20.42■□□□□ 0.86
PSPC1-201ENST00000338910 FTCDO95954 541 aa20.42■□□□□ 0.86
PSPC1-201ENST00000338910 MYZAPP0CAP1 466 aa20.42■□□□□ 0.86
PSPC1-201ENST00000338910 ECHS1P30084 290 aa20.42■□□□□ 0.86
PSPC1-201ENST00000338910 HSD17B3P37058 310 aa20.42■□□□□ 0.86
PSPC1-201ENST00000338910 ANKRD20A8PQ5CZ79 823 aa20.42■□□□□ 0.86
PSPC1-201ENST00000338910 MEI1Q5TIA1 1274 aa20.42■□□□□ 0.86
PSPC1-201ENST00000338910 TRPM4Q8TD43 1214 aa20.42■□□□□ 0.86
PSPC1-201ENST00000338910 ISCUQ9H1K1 167 aa20.42■□□□□ 0.86
PSPC1-201ENST00000338910 EMILIN3Q9NT22 766 aa20.42■□□□□ 0.86
PSPC1-201ENST00000338910 TMEM59LQ9UK28 342 aa20.42■□□□□ 0.86
PSPC1-201ENST00000338910 PCDHGC5Q9Y5F6 944 aa20.42■□□□□ 0.86
PSPC1-201ENST00000338910 CLGNO14967 610 aa20.41■□□□□ 0.86
PSPC1-201ENST00000338910 DNA2P51530 1060 aa20.41■□□□□ 0.86
PSPC1-201ENST00000338910 FKBP3Q00688 224 aaKnown RBP20.41■□□□□ 0.86
PSPC1-201ENST00000338910 GIT2Q14161 759 aa20.41■□□□□ 0.86
PSPC1-201ENST00000338910 NAB2Q15742 525 aa20.41■□□□□ 0.86
PSPC1-201ENST00000338910 QPCTQ16769 361 aa20.41■□□□□ 0.86
PSPC1-201ENST00000338910 SYT2Q8N9I0 419 aaPredicted RBP20.41■□□□□ 0.86
PSPC1-201ENST00000338910 SCFD1Q8WVM8 642 aa20.41■□□□□ 0.86
PSPC1-201ENST00000338910 MIEF2Q96C03 454 aa20.41■□□□□ 0.86
PSPC1-201ENST00000338910 BHMT2Q9H2M3 363 aa20.41■□□□□ 0.86
PSPC1-201ENST00000338910 C5orf60A6NFR6 353 aa20.41■□□□□ 0.86
PSPC1-201ENST00000338910 CTTNQ14247 550 aaKnown RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms