RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 MAFO75444 373 aaPredicted RBP16.25■□□□□ 0.19
CDK5RAP3-201ENST00000338399 HOXD8P13378 290 aaPredicted RBP16.25■□□□□ 0.19
CDK5RAP3-201ENST00000338399 SPAG1Q07617 926 aa16.25■□□□□ 0.19
CDK5RAP3-201ENST00000338399 DMP1Q13316 513 aaPredicted RBP16.25■□□□□ 0.19
CDK5RAP3-201ENST00000338399 KRT31Q15323 416 aa16.25■□□□□ 0.19
CDK5RAP3-201ENST00000338399 DGKDQ16760 1214 aa16.25■□□□□ 0.19
CDK5RAP3-201ENST00000338399 APTXQ7Z2E3 356 aaKnown RBP16.25■□□□□ 0.19
CDK5RAP3-201ENST00000338399 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.25■□□□□ 0.19
CDK5RAP3-201ENST00000338399 UBE4BO95155 1302 aa16.25■□□□□ 0.19
CDK5RAP3-201ENST00000338399 PPP1R37O75864 691 aa16.25■□□□□ 0.19
CDK5RAP3-201ENST00000338399 AKR1A1P14550 325 aa16.25■□□□□ 0.19
CDK5RAP3-201ENST00000338399 CDC25BP30305 580 aa16.25■□□□□ 0.19
CDK5RAP3-201ENST00000338399 NPTX2P47972 431 aa16.25■□□□□ 0.19
CDK5RAP3-201ENST00000338399 SMTNP53814 917 aa16.25■□□□□ 0.19
CDK5RAP3-201ENST00000338399 NCKAP1LP55160 1127 aa16.25■□□□□ 0.19
CDK5RAP3-201ENST00000338399 FKBP3Q00688 224 aaKnown RBP16.25■□□□□ 0.19
CDK5RAP3-201ENST00000338399 TBC1D8BQ0IIM8 1120 aa16.25■□□□□ 0.19
CDK5RAP3-201ENST00000338399 TRIM32Q13049 653 aa16.25■□□□□ 0.19
CDK5RAP3-201ENST00000338399 HAUS6Q7Z4H7 955 aa16.25■□□□□ 0.19
CDK5RAP3-201ENST00000338399 ANKRD20A12PQ8NF67 263 aa16.25■□□□□ 0.19
CDK5RAP3-201ENST00000338399 TRAPPC12Q8WVT3 735 aa16.25■□□□□ 0.19
CDK5RAP3-201ENST00000338399 IKZF4Q9H2S9 585 aa16.25■□□□□ 0.19
CDK5RAP3-201ENST00000338399 C17orf75Q9HAS0 396 aa16.25■□□□□ 0.19
CDK5RAP3-201ENST00000338399 MAGEC2Q9UBF1 373 aaPredicted RBP16.25■□□□□ 0.19
CDK5RAP3-201ENST00000338399 SRRDQ9UH36 339 aa16.25■□□□□ 0.19
CDK5RAP3-201ENST00000338399 LIMA1Q9UHB6 759 aaKnown RBP16.25■□□□□ 0.19
CDK5RAP3-201ENST00000338399 TRAF3IP3Q9Y228 551 aa16.25■□□□□ 0.19
CDK5RAP3-201ENST00000338399 PPME1Q9Y570 386 aa16.25■□□□□ 0.19
CDK5RAP3-201ENST00000338399 ZMYM2Q9UBW7 1377 aa16.24■□□□□ 0.19
CDK5RAP3-201ENST00000338399 A6NJR5 290 aa16.24■□□□□ 0.19
CDK5RAP3-201ENST00000338399 H3BRB1 525 aa16.24■□□□□ 0.19
CDK5RAP3-201ENST00000338399 PDXKO00764 312 aa16.24■□□□□ 0.19
CDK5RAP3-201ENST00000338399 FGFR1OPO95684 399 aaKnown RBP16.24■□□□□ 0.19
CDK5RAP3-201ENST00000338399 CYBAP13498 195 aa16.24■□□□□ 0.19
CDK5RAP3-201ENST00000338399 EEF1GP26641 437 aaKnown RBP16.24■□□□□ 0.19
CDK5RAP3-201ENST00000338399 HOXD10P28358 340 aa16.24■□□□□ 0.19
CDK5RAP3-201ENST00000338399 RTP1P59025 263 aa16.24■□□□□ 0.19
CDK5RAP3-201ENST00000338399 IRX5P78411 483 aaPredicted RBP16.24■□□□□ 0.19
CDK5RAP3-201ENST00000338399 PPP4R3CPQ6ZMV5 832 aa16.24■□□□□ 0.19
CDK5RAP3-201ENST00000338399 LRRC55Q6ZSA7 311 aa16.24■□□□□ 0.19
CDK5RAP3-201ENST00000338399 FAM114A1Q8IWE2 563 aa16.24■□□□□ 0.19
CDK5RAP3-201ENST00000338399 IFT74Q96LB3 600 aa16.24■□□□□ 0.19
CDK5RAP3-201ENST00000338399 CNOT6LQ96LI5 555 aaKnown RBP16.24■□□□□ 0.19
CDK5RAP3-201ENST00000338399 CTAGE1Q96RT6 745 aa16.24■□□□□ 0.19
CDK5RAP3-201ENST00000338399 KIFC3Q9BVG8 833 aa16.24■□□□□ 0.19
CDK5RAP3-201ENST00000338399 AP5M1Q9H0R1 490 aa16.24■□□□□ 0.19
CDK5RAP3-201ENST00000338399 TUT1Q9H6E5 874 aaKnown RBP16.24■□□□□ 0.19
CDK5RAP3-201ENST00000338399 KMT5AQ9NQR1 393 aa16.24■□□□□ 0.19
CDK5RAP3-201ENST00000338399 TYW1Q9NV66 732 aaKnown RBP16.24■□□□□ 0.19
CDK5RAP3-201ENST00000338399 INTS13Q9NVM9 706 aa16.24■□□□□ 0.19
CDK5RAP3-201ENST00000338399 NRBP1Q9UHY1 535 aa16.24■□□□□ 0.19
CDK5RAP3-201ENST00000338399 ZNF215Q9UL58 517 aaPredicted RBP16.24■□□□□ 0.19
CDK5RAP3-201ENST00000338399 EVPLQ92817 2033 aa16.24■□□□□ 0.19
CDK5RAP3-201ENST00000338399 A0A1B0GTH6 734 aa16.23■□□□□ 0.19
CDK5RAP3-201ENST00000338399 TGFB1I1O43294 461 aa16.23■□□□□ 0.19
CDK5RAP3-201ENST00000338399 CALUO43852 315 aaPredicted RBP16.23■□□□□ 0.19
CDK5RAP3-201ENST00000338399 PTMAP06454 111 aaKnown RBP16.23■□□□□ 0.19
CDK5RAP3-201ENST00000338399 INSRRP14616 1297 aa16.23■□□□□ 0.19
CDK5RAP3-201ENST00000338399 ELNP15502 786 aa16.23■□□□□ 0.19
CDK5RAP3-201ENST00000338399 ARL2P36404 184 aa16.23■□□□□ 0.19
CDK5RAP3-201ENST00000338399 GTF2BQ00403 316 aa16.23■□□□□ 0.19
CDK5RAP3-201ENST00000338399 ALCAMQ13740 583 aa16.23■□□□□ 0.19
CDK5RAP3-201ENST00000338399 PTPN21Q16825 1174 aa16.23■□□□□ 0.19
CDK5RAP3-201ENST00000338399 EDRF1Q3B7T1 1238 aa16.23■□□□□ 0.19
CDK5RAP3-201ENST00000338399 SLC17A8Q8NDX2 589 aa16.23■□□□□ 0.19
CDK5RAP3-201ENST00000338399 SPIRE2Q8WWL2 714 aa16.23■□□□□ 0.19
CDK5RAP3-201ENST00000338399 VPS16Q9H269 839 aa16.23■□□□□ 0.19
CDK5RAP3-201ENST00000338399 ST6GALNAC4Q9H4F1 302 aa16.23■□□□□ 0.19
CDK5RAP3-201ENST00000338399 TAB2Q9NYJ8 693 aa16.23■□□□□ 0.19
CDK5RAP3-201ENST00000338399 Q9Y3F1 56 aa16.23■□□□□ 0.19
CDK5RAP3-201ENST00000338399 KAT6AQ92794 2004 aa16.23■□□□□ 0.19
CDK5RAP3-201ENST00000338399 LRRC10BA6NIK2 292 aa16.22■□□□□ 0.19
CDK5RAP3-201ENST00000338399 CLIC2O15247 247 aa16.22■□□□□ 0.19
CDK5RAP3-201ENST00000338399 TPM3P06753 285 aa16.22■□□□□ 0.19
CDK5RAP3-201ENST00000338399 CNGA1P29973 690 aa16.22■□□□□ 0.19
CDK5RAP3-201ENST00000338399 COPB1P53618 953 aaKnown RBP16.22■□□□□ 0.19
CDK5RAP3-201ENST00000338399 IGBP1P78318 339 aa16.22■□□□□ 0.19
CDK5RAP3-201ENST00000338399 CACNB2Q08289 660 aaPredicted RBP16.22■□□□□ 0.19
CDK5RAP3-201ENST00000338399 ADAM9Q13443 819 aa16.22■□□□□ 0.19
CDK5RAP3-201ENST00000338399 ZNF484Q5JVG2 852 aa16.22■□□□□ 0.19
CDK5RAP3-201ENST00000338399 SYCP3Q8IZU3 236 aa16.22■□□□□ 0.19
CDK5RAP3-201ENST00000338399 TMEM161BQ8NDZ6 487 aa16.22■□□□□ 0.19
CDK5RAP3-201ENST00000338399 ASAP3Q8TDY4 903 aa16.22■□□□□ 0.19
CDK5RAP3-201ENST00000338399 NTPCRQ9BSD7 190 aaKnown RBP16.22■□□□□ 0.19
CDK5RAP3-201ENST00000338399 SUGCTQ9HAC7 445 aa16.22■□□□□ 0.19
CDK5RAP3-201ENST00000338399 FKTNO75072 461 aa16.22■□□□□ 0.19
CDK5RAP3-201ENST00000338399 GLRA2P23416 452 aa16.22■□□□□ 0.19
CDK5RAP3-201ENST00000338399 NR2F2P24468 414 aa16.22■□□□□ 0.19
CDK5RAP3-201ENST00000338399 BEX3Q00994 111 aa16.22■□□□□ 0.19
CDK5RAP3-201ENST00000338399 DRP2Q13474 957 aa16.22■□□□□ 0.19
CDK5RAP3-201ENST00000338399 NR1I3Q14994 352 aa16.22■□□□□ 0.19
CDK5RAP3-201ENST00000338399 FILIP1LQ4L180 1135 aa16.22■□□□□ 0.19
CDK5RAP3-201ENST00000338399 EXOC8Q8IYI6 725 aa16.22■□□□□ 0.19
CDK5RAP3-201ENST00000338399 LRRC71Q8N4P6 559 aa16.22■□□□□ 0.19
CDK5RAP3-201ENST00000338399 ZBTB10Q96DT7 871 aa16.22■□□□□ 0.19
CDK5RAP3-201ENST00000338399 ERO1AQ96HE7 468 aa16.22■□□□□ 0.19
CDK5RAP3-201ENST00000338399 CEP63Q96MT8 703 aa16.22■□□□□ 0.19
CDK5RAP3-201ENST00000338399 ACCSQ96QU6 501 aa16.22■□□□□ 0.19
CDK5RAP3-201ENST00000338399 SAGE1Q9NXZ1 904 aa16.22■□□□□ 0.19
CDK5RAP3-201ENST00000338399 ADGRA3Q8IWK6 1321 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms