RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 PLAAQ9Y263 795 aa17.48■□□□□ 0.39
PTCH1-201ENST00000331920 RALGAPBQ86X10 1494 aa17.48■□□□□ 0.39
PTCH1-201ENST00000331920 RASGRP4Q8TDF6 673 aa17.47■□□□□ 0.39
PTCH1-201ENST00000331920 TBC1D22AQ8WUA7 517 aa17.47■□□□□ 0.39
PTCH1-201ENST00000331920 PBKQ96KB5 322 aa17.47■□□□□ 0.39
PTCH1-201ENST00000331920 ECT2Q9H8V3 914 aa17.47■□□□□ 0.39
PTCH1-201ENST00000331920 SESN1Q9Y6P5 492 aa17.47■□□□□ 0.39
PTCH1-201ENST00000331920 NFX1Q12986 1120 aaKnown RBP17.47■□□□□ 0.39
PTCH1-201ENST00000331920 C16orf72Q14CZ0 275 aa17.47■□□□□ 0.39
PTCH1-201ENST00000331920 CLEC4FQ8N1N0 589 aa17.47■□□□□ 0.39
PTCH1-201ENST00000331920 HEMGNQ9BXL5 484 aa17.47■□□□□ 0.39
PTCH1-201ENST00000331920 DISP3Q9P2K9 1392 aa17.47■□□□□ 0.39
PTCH1-201ENST00000331920 ADCY2Q08462 1091 aa17.47■□□□□ 0.39
PTCH1-201ENST00000331920 MFSD4BQ5TF39 518 aa17.47■□□□□ 0.39
PTCH1-201ENST00000331920 CDR2LQ86X02 465 aaPredicted RBP17.47■□□□□ 0.39
PTCH1-201ENST00000331920 DIS3LQ8TF46 1054 aaKnown RBP17.47■□□□□ 0.39
PTCH1-201ENST00000331920 MTERF3Q96E29 417 aa17.47■□□□□ 0.39
PTCH1-201ENST00000331920 A1BGP04217 495 aa17.47■□□□□ 0.39
PTCH1-201ENST00000331920 CSE1LP55060 971 aaKnown RBP17.47■□□□□ 0.39
PTCH1-201ENST00000331920 TRIM32Q13049 653 aa17.47■□□□□ 0.39
PTCH1-201ENST00000331920 ARHGEF6Q15052 776 aa17.47■□□□□ 0.39
PTCH1-201ENST00000331920 KBTBD3Q8NAB2 608 aa17.47■□□□□ 0.39
PTCH1-201ENST00000331920 IPO5O00410 1097 aaKnown RBP17.47■□□□□ 0.39
PTCH1-201ENST00000331920 PGBD3Q8N328 593 aa17.47■□□□□ 0.39
PTCH1-201ENST00000331920 CUL1Q13616 776 aa17.47■□□□□ 0.39
PTCH1-201ENST00000331920 TEDDM1Q5T9Z0 273 aa17.47■□□□□ 0.39
PTCH1-201ENST00000331920 STAG2Q8N3U4 1231 aa17.47■□□□□ 0.39
PTCH1-201ENST00000331920 GDAQ9Y2T3 454 aa17.47■□□□□ 0.39
PTCH1-201ENST00000331920 ASXL1Q8IXJ9 1541 aa17.47■□□□□ 0.39
PTCH1-201ENST00000331920 TOMM70O94826 608 aa17.46■□□□□ 0.39
PTCH1-201ENST00000331920 IL10P22301 178 aa17.46■□□□□ 0.39
PTCH1-201ENST00000331920 MAPRE1Q15691 268 aaKnown RBP17.46■□□□□ 0.39
PTCH1-201ENST00000331920 RAB42Q8N4Z0 105 aa17.46■□□□□ 0.39
PTCH1-201ENST00000331920 THAP11Q96EK4 314 aa17.46■□□□□ 0.39
PTCH1-201ENST00000331920 NRBP1Q9UHY1 535 aa17.46■□□□□ 0.39
PTCH1-201ENST00000331920 CDC23Q9UJX2 597 aa17.46■□□□□ 0.39
PTCH1-201ENST00000331920 FAM32AQ9Y421 112 aaKnown RBP17.46■□□□□ 0.39
PTCH1-201ENST00000331920 TBC1D4O60343 1298 aa17.46■□□□□ 0.39
PTCH1-201ENST00000331920 FOSP01100 380 aaPredicted RBP17.46■□□□□ 0.39
PTCH1-201ENST00000331920 GYG1P46976 350 aa17.46■□□□□ 0.39
PTCH1-201ENST00000331920 CACNB2Q08289 660 aaPredicted RBP17.46■□□□□ 0.39
PTCH1-201ENST00000331920 RARS2Q5T160 578 aaKnown RBP17.46■□□□□ 0.39
PTCH1-201ENST00000331920 SLFN13Q68D06 897 aa17.46■□□□□ 0.39
PTCH1-201ENST00000331920 MAP10Q9P2G4 905 aa17.46■□□□□ 0.39
PTCH1-201ENST00000331920 PCDHA13Q9Y5I0 950 aa17.46■□□□□ 0.39
PTCH1-201ENST00000331920 KIF14Q15058 1648 aa17.46■□□□□ 0.39
PTCH1-201ENST00000331920 MAP3K15Q6ZN16 1313 aa17.46■□□□□ 0.39
PTCH1-201ENST00000331920 PARVBQ9HBI1 364 aa17.46■□□□□ 0.39
PTCH1-201ENST00000331920 SOS2Q07890 1332 aaPredicted RBP17.46■□□□□ 0.39
PTCH1-201ENST00000331920 GYS2P54840 703 aa17.46■□□□□ 0.39
PTCH1-201ENST00000331920 PLEKHA8Q96JA3 519 aa17.46■□□□□ 0.39
PTCH1-201ENST00000331920 ARHGEF11O15085 1522 aa17.46■□□□□ 0.39
PTCH1-201ENST00000331920 LINC00854A0A1B0GVQ3 168 aa17.46■□□□□ 0.39
PTCH1-201ENST00000331920 ASAP2O43150 1006 aa17.46■□□□□ 0.39
PTCH1-201ENST00000331920 KRT37O76014 449 aa17.46■□□□□ 0.39
PTCH1-201ENST00000331920 TLK2Q86UE8 772 aa17.46■□□□□ 0.39
PTCH1-201ENST00000331920 RABGGTAQ92696 567 aa17.46■□□□□ 0.39
PTCH1-201ENST00000331920 EDC3Q96F86 508 aaKnown RBP17.46■□□□□ 0.39
PTCH1-201ENST00000331920 SH3GL1Q99961 368 aa17.46■□□□□ 0.39
PTCH1-201ENST00000331920 MAD2L2Q9UI95 211 aa17.46■□□□□ 0.39
PTCH1-201ENST00000331920 NCALDP61601 193 aa17.46■□□□□ 0.39
PTCH1-201ENST00000331920 PRAMEP78395 509 aa17.46■□□□□ 0.39
PTCH1-201ENST00000331920 BFSP2Q13515 415 aa17.46■□□□□ 0.39
PTCH1-201ENST00000331920 SLC10A5Q5PT55 438 aa17.46■□□□□ 0.39
PTCH1-201ENST00000331920 ANKRD40Q6AI12 368 aa17.46■□□□□ 0.39
PTCH1-201ENST00000331920 OR6P1Q8NGX9 317 aa17.46■□□□□ 0.39
PTCH1-201ENST00000331920 G2E3Q7L622 706 aa17.46■□□□□ 0.38
PTCH1-201ENST00000331920 CCDC103Q8IW40 242 aa17.46■□□□□ 0.38
PTCH1-201ENST00000331920 SLC17A8Q8NDX2 589 aa17.46■□□□□ 0.38
PTCH1-201ENST00000331920 SAMSN1Q9NSI8 373 aaKnown RBP17.46■□□□□ 0.38
PTCH1-201ENST00000331920 BTDP43251 543 aa17.45■□□□□ 0.38
PTCH1-201ENST00000331920 TRIM54Q9BYV2 358 aa17.45■□□□□ 0.38
PTCH1-201ENST00000331920 PTPN23Q9H3S7 1636 aa17.45■□□□□ 0.38
PTCH1-201ENST00000331920 ARHGEF37A1IGU5 675 aa17.45■□□□□ 0.38
PTCH1-201ENST00000331920 DEAF1O75398 565 aaPredicted RBP17.45■□□□□ 0.38
PTCH1-201ENST00000331920 SLC16A2P36021 539 aa17.45■□□□□ 0.38
PTCH1-201ENST00000331920 KLHL24Q6TFL4 600 aa17.45■□□□□ 0.38
PTCH1-201ENST00000331920 CCDC149Q6ZUS6 474 aa17.45■□□□□ 0.38
PTCH1-201ENST00000331920 OPTNQ96CV9 577 aa17.45■□□□□ 0.38
PTCH1-201ENST00000331920 ADD1P35611 737 aaKnown RBP17.45■□□□□ 0.38
PTCH1-201ENST00000331920 CCNA1P78396 465 aa17.45■□□□□ 0.38
PTCH1-201ENST00000331920 DDHD2O94830 711 aa17.45■□□□□ 0.38
PTCH1-201ENST00000331920 BBS2Q9BXC9 721 aa17.45■□□□□ 0.38
PTCH1-201ENST00000331920 BRD8Q9H0E9 1235 aa17.45■□□□□ 0.38
PTCH1-201ENST00000331920 DTNAQ9Y4J8 743 aa17.45■□□□□ 0.38
PTCH1-201ENST00000331920 ACTN3Q08043 901 aaPredicted RBP17.45■□□□□ 0.38
PTCH1-201ENST00000331920 C10orf53Q8N6V4 93 aa17.45■□□□□ 0.38
PTCH1-201ENST00000331920 TMA16Q96EY4 203 aaKnown RBP17.45■□□□□ 0.38
PTCH1-201ENST00000331920 TMEM63CQ9P1W3 806 aa17.45■□□□□ 0.38
PTCH1-201ENST00000331920 ETF1P62495 437 aaKnown RBP17.44■□□□□ 0.38
PTCH1-201ENST00000331920 CUL3Q13618 768 aa17.44■□□□□ 0.38
PTCH1-201ENST00000331920 VN1R5Q7Z5H4 357 aa17.44■□□□□ 0.38
PTCH1-201ENST00000331920 GRAMD1CQ8IYS0 662 aa17.44■□□□□ 0.38
PTCH1-201ENST00000331920 A0A087WUV0 522 aaPredicted RBP17.44■□□□□ 0.38
PTCH1-201ENST00000331920 ALDH18A1P54886 795 aaKnown RBP17.44■□□□□ 0.38
PTCH1-201ENST00000331920 MSTO1Q9BUK6 570 aa17.44■□□□□ 0.38
PTCH1-201ENST00000331920 UNC45AQ9H3U1 944 aa17.44■□□□□ 0.38
PTCH1-201ENST00000331920 EXOSC4Q9NPD3 245 aaKnown RBP17.44■□□□□ 0.38
PTCH1-201ENST00000331920 CCDC78A2IDD5 438 aa17.44■□□□□ 0.38
PTCH1-201ENST00000331920 DENND3A2RUS2 1198 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms