RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 PDS5AQ29RF7 1337 aaKnown RBP17.58■□□□□ 0.4
BRD3-201ENST00000303407 ITIH6Q6UXX5 1313 aa17.58■□□□□ 0.4
BRD3-201ENST00000303407 OATP04181 439 aa17.58■□□□□ 0.4
BRD3-201ENST00000303407 ZNF543Q08ER8 600 aa17.58■□□□□ 0.4
BRD3-201ENST00000303407 MTRQ99707 1265 aa17.58■□□□□ 0.4
BRD3-201ENST00000303407 SNX24Q9Y343 169 aa17.58■□□□□ 0.4
BRD3-201ENST00000303407 ACSL3O95573 720 aa17.57■□□□□ 0.4
BRD3-201ENST00000303407 SFNP31947 248 aa17.57■□□□□ 0.4
BRD3-201ENST00000303407 PRR5LQ6MZQ0 368 aa17.57■□□□□ 0.4
BRD3-201ENST00000303407 FRMD5Q7Z6J6 570 aa17.57■□□□□ 0.4
BRD3-201ENST00000303407 WRNIP1Q96S55 665 aa17.57■□□□□ 0.4
BRD3-201ENST00000303407 KIAA1586Q9HCI6 787 aa17.57■□□□□ 0.4
BRD3-201ENST00000303407 BCAP29Q9UHQ4 241 aa17.57■□□□□ 0.4
BRD3-201ENST00000303407 AFG3L2Q9Y4W6 797 aa17.57■□□□□ 0.4
BRD3-201ENST00000303407 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.57■□□□□ 0.4
BRD3-201ENST00000303407 MARCH10Q8NA82 808 aaPredicted RBP17.57■□□□□ 0.4
BRD3-201ENST00000303407 RNF146Q9NTX7 359 aa17.57■□□□□ 0.4
BRD3-201ENST00000303407 ARL4AP40617 200 aa17.57■□□□□ 0.4
BRD3-201ENST00000303407 FBXO33Q7Z6M2 555 aa17.57■□□□□ 0.4
BRD3-201ENST00000303407 NUP85Q9BW27 656 aa17.57■□□□□ 0.4
BRD3-201ENST00000303407 ADAM22Q9P0K1 906 aa17.57■□□□□ 0.4
BRD3-201ENST00000303407 FAM133BQ5BKY9 247 aaKnown RBP17.57■□□□□ 0.4
BRD3-201ENST00000303407 TRIM68Q6AZZ1 485 aa17.57■□□□□ 0.4
BRD3-201ENST00000303407 NSUN6Q8TEA1 469 aaKnown RBP17.57■□□□□ 0.4
BRD3-201ENST00000303407 CRAMP1Q96RY5 1269 aa17.57■□□□□ 0.4
BRD3-201ENST00000303407 NKX1-1Q15270 411 aaPredicted RBP17.56■□□□□ 0.4
BRD3-201ENST00000303407 THNSL1Q8IYQ7 743 aa17.56■□□□□ 0.4
BRD3-201ENST00000303407 ZNF302Q9NR11 478 aa17.56■□□□□ 0.4
BRD3-201ENST00000303407 ADGRB2O60241 1585 aa17.56■□□□□ 0.4
BRD3-201ENST00000303407 RHOBTB3O94955 611 aa17.56■□□□□ 0.4
BRD3-201ENST00000303407 EYA4O95677 639 aa17.56■□□□□ 0.4
BRD3-201ENST00000303407 SESN3P58005 492 aa17.56■□□□□ 0.4
BRD3-201ENST00000303407 USP49Q70CQ1 688 aa17.56■□□□□ 0.4
BRD3-201ENST00000303407 RSPH3Q86UC2 560 aa17.56■□□□□ 0.4
BRD3-201ENST00000303407 HOXC10Q9NYD6 342 aa17.56■□□□□ 0.4
BRD3-201ENST00000303407 GABBR1Q9UBS5 961 aa17.56■□□□□ 0.4
BRD3-201ENST00000303407 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.56■□□□□ 0.4
BRD3-201ENST00000303407 TACC3Q9Y6A5 838 aa17.56■□□□□ 0.4
BRD3-201ENST00000303407 SWSAP1Q6NVH7 229 aa17.56■□□□□ 0.4
BRD3-201ENST00000303407 ZNF564Q8TBZ8 553 aaPredicted RBP17.56■□□□□ 0.4
BRD3-201ENST00000303407 CLDN3O15551 220 aa17.56■□□□□ 0.4
BRD3-201ENST00000303407 BAG2O95816 211 aa17.56■□□□□ 0.4
BRD3-201ENST00000303407 RASA1P20936 1047 aa17.56■□□□□ 0.4
BRD3-201ENST00000303407 KIF22Q14807 665 aa17.56■□□□□ 0.4
BRD3-201ENST00000303407 ZNF394Q53GI3 561 aa17.56■□□□□ 0.4
BRD3-201ENST00000303407 METTL23Q86XA0 190 aa17.56■□□□□ 0.4
BRD3-201ENST00000303407 TUFT1Q9NNX1 390 aa17.56■□□□□ 0.4
BRD3-201ENST00000303407 TJP3O95049 919 aa17.56■□□□□ 0.4
BRD3-201ENST00000303407 MT-ND3P03897 115 aa17.56■□□□□ 0.4
BRD3-201ENST00000303407 ZNF211Q13398 564 aaPredicted RBP17.56■□□□□ 0.4
BRD3-201ENST00000303407 RAPH1Q70E73 1250 aa17.56■□□□□ 0.4
BRD3-201ENST00000303407 CLEC10AQ8IUN9 316 aa17.56■□□□□ 0.4
BRD3-201ENST00000303407 GIMAP8Q8ND71 665 aaPredicted RBP17.56■□□□□ 0.4
BRD3-201ENST00000303407 SAAL1Q96ER3 474 aa17.56■□□□□ 0.4
BRD3-201ENST00000303407 SRGNP10124 158 aa17.55■□□□□ 0.4
BRD3-201ENST00000303407 MKRN3Q13064 507 aaKnown RBP17.55■□□□□ 0.4
BRD3-201ENST00000303407 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.55■□□□□ 0.41e-7■■■□□ 15.4
BRD3-201ENST00000303407 POLR3FQ9H1D9 316 aaPredicted RBP17.55■□□□□ 0.4
BRD3-201ENST00000303407 MEGF6O75095 1541 aa17.55■□□□□ 0.4
BRD3-201ENST00000303407 SART1O43290 800 aaKnown RBP17.55■□□□□ 0.4
BRD3-201ENST00000303407 TRIM49P0CI25 452 aa17.55■□□□□ 0.4
BRD3-201ENST00000303407 TRIM49CP0CI26 452 aa17.55■□□□□ 0.4
BRD3-201ENST00000303407 KCNJ6P48051 423 aa17.55■□□□□ 0.4
BRD3-201ENST00000303407 PSMC5P62195 406 aa17.55■□□□□ 0.4
BRD3-201ENST00000303407 CDO1Q16878 200 aa17.55■□□□□ 0.4
BRD3-201ENST00000303407 PHLDB3Q6NSJ2 640 aa17.55■□□□□ 0.4
BRD3-201ENST00000303407 TMEM270Q6UE05 265 aa17.55■□□□□ 0.4
BRD3-201ENST00000303407 HERC5Q9UII4 1024 aaKnown RBP17.55■□□□□ 0.4
BRD3-201ENST00000303407 SRGAP2BP0DMP2 458 aa17.55■□□□□ 0.4
BRD3-201ENST00000303407 SOX5P35711 763 aa17.55■□□□□ 0.4
BRD3-201ENST00000303407 RPS6KA2Q15349 733 aa17.55■□□□□ 0.4
BRD3-201ENST00000303407 CHP1Q99653 195 aa17.55■□□□□ 0.4
BRD3-201ENST00000303407 HEMGNQ9BXL5 484 aa17.55■□□□□ 0.4
BRD3-201ENST00000303407 ADAM21Q9UKJ8 722 aa17.55■□□□□ 0.4
BRD3-201ENST00000303407 MAP3K21Q5TCX8 1036 aa17.55■□□□□ 0.4
BRD3-201ENST00000303407 CENPUQ71F23 418 aa17.55■□□□□ 0.4
BRD3-201ENST00000303407 SALL3Q9BXA9 1300 aa17.55■□□□□ 0.4
BRD3-201ENST00000303407 ZNF746Q6NUN9 644 aaPredicted RBP17.54■□□□□ 0.4
BRD3-201ENST00000303407 CFAP61Q8NHU2 1237 aa17.54■□□□□ 0.4
BRD3-201ENST00000303407 FAM167AQ96KS9 214 aa17.54■□□□□ 0.4
BRD3-201ENST00000303407 SMYD2Q9NRG4 433 aa17.54■□□□□ 0.4
BRD3-201ENST00000303407 MAGED2Q9UNF1 606 aaPredicted RBP17.54■□□□□ 0.4
BRD3-201ENST00000303407 SLIT1O75093 1534 aa17.54■□□□□ 0.4
BRD3-201ENST00000303407 ESYT3A0FGR9 886 aa17.54■□□□□ 0.4
BRD3-201ENST00000303407 VPS72Q15906 364 aa17.54■□□□□ 0.4
BRD3-201ENST00000303407 ZNF667Q5HYK9 610 aa17.54■□□□□ 0.4
BRD3-201ENST00000303407 TRIM42Q8IWZ5 723 aa17.54■□□□□ 0.4
BRD3-201ENST00000303407 ENGASEQ8NFI3 743 aa17.54■□□□□ 0.4
BRD3-201ENST00000303407 NUF2Q9BZD4 464 aa17.54■□□□□ 0.4
BRD3-201ENST00000303407 FTLP02792 175 aaPredicted RBP17.54■□□□□ 0.4
BRD3-201ENST00000303407 NMT1P30419 496 aaKnown RBP17.54■□□□□ 0.4
BRD3-201ENST00000303407 MAP2K2P36507 400 aa17.54■□□□□ 0.4
BRD3-201ENST00000303407 BBS9Q3SYG4 887 aa17.54■□□□□ 0.4
BRD3-201ENST00000303407 LDHDQ86WU2 507 aa17.54■□□□□ 0.4
BRD3-201ENST00000303407 PRPF38AQ8NAV1 312 aaKnown RBP17.54■□□□□ 0.4
BRD3-201ENST00000303407 RGL1Q9NZL6 768 aa17.54■□□□□ 0.4
BRD3-201ENST00000303407 IPO11Q9UI26 975 aaKnown RBP17.54■□□□□ 0.4
BRD3-201ENST00000303407 GRIN1Q05586 938 aa17.54■□□□□ 0.4
BRD3-201ENST00000303407 EPHA7Q15375 998 aa17.54■□□□□ 0.4
BRD3-201ENST00000303407 GSDMBQ8TAX9 411 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms