RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 GOLGA8CPA6NN73 597 aa18.5■□□□□ 0.55
CDCP1-201ENST00000296129 ZBED1O96006 694 aa18.5■□□□□ 0.55
CDCP1-201ENST00000296129 IFT88Q13099 833 aa18.5■□□□□ 0.55
CDCP1-201ENST00000296129 CCDC38Q502W7 563 aa18.5■□□□□ 0.55
CDCP1-201ENST00000296129 GUF1Q8N442 669 aaKnown RBP18.5■□□□□ 0.55
CDCP1-201ENST00000296129 DCLK2Q8N568 766 aa18.5■□□□□ 0.55
CDCP1-201ENST00000296129 KIF9Q9HAQ2 790 aa18.5■□□□□ 0.55
CDCP1-201ENST00000296129 ITSN1Q15811 1721 aa18.5■□□□□ 0.55
CDCP1-201ENST00000296129 EXOC1LA0A1B0GW35 172 aa18.5■□□□□ 0.55
CDCP1-201ENST00000296129 CASQ2O14958 399 aaPredicted RBP18.5■□□□□ 0.55
CDCP1-201ENST00000296129 BAG2O95816 211 aa18.5■□□□□ 0.55
CDCP1-201ENST00000296129 ANTXR2P58335 489 aa18.5■□□□□ 0.55
CDCP1-201ENST00000296129 BBS9Q3SYG4 887 aa18.5■□□□□ 0.55
CDCP1-201ENST00000296129 ALS2CLQ60I27 953 aa18.5■□□□□ 0.55
CDCP1-201ENST00000296129 CLEC10AQ8IUN9 316 aa18.5■□□□□ 0.55
CDCP1-201ENST00000296129 SEL1LQ9UBV2 794 aa18.5■□□□□ 0.55
CDCP1-201ENST00000296129 USP27XA6NNY8 438 aa18.49■□□□□ 0.55
CDCP1-201ENST00000296129 RASGRF2O14827 1237 aa18.49■□□□□ 0.55
CDCP1-201ENST00000296129 ZNF668Q96K58 619 aaPredicted RBP18.49■□□□□ 0.55
CDCP1-201ENST00000296129 DIP2BQ9P265 1576 aa18.49■□□□□ 0.55
CDCP1-201ENST00000296129 HIP1RO75146 1068 aa18.49■□□□□ 0.55
CDCP1-201ENST00000296129 MT-ND3P03897 115 aa18.49■□□□□ 0.55
CDCP1-201ENST00000296129 MAP3K21Q5TCX8 1036 aa18.49■□□□□ 0.55
CDCP1-201ENST00000296129 TTC26A0AVF1 554 aa18.49■□□□□ 0.55
CDCP1-201ENST00000296129 PLS3P13797 630 aa18.49■□□□□ 0.55
CDCP1-201ENST00000296129 STRIP1Q5VSL9 837 aa18.49■□□□□ 0.55
CDCP1-201ENST00000296129 MCUQ8NE86 351 aa18.49■□□□□ 0.55
CDCP1-201ENST00000296129 GDAP1Q8TB36 358 aa18.49■□□□□ 0.55
CDCP1-201ENST00000296129 ZBTB24O43167 697 aaPredicted RBP18.49■□□□□ 0.55
CDCP1-201ENST00000296129 S100BP04271 92 aaPredicted RBP18.49■□□□□ 0.55
CDCP1-201ENST00000296129 ZNF543Q08ER8 600 aa18.49■□□□□ 0.55
CDCP1-201ENST00000296129 TTLL4Q14679 1199 aa18.49■□□□□ 0.55
CDCP1-201ENST00000296129 DRAP1Q14919 205 aaPredicted RBP18.49■□□□□ 0.55
CDCP1-201ENST00000296129 MUM1L1Q5H9M0 696 aa18.49■□□□□ 0.55
CDCP1-201ENST00000296129 RNF139Q8WU17 664 aa18.49■□□□□ 0.55
CDCP1-201ENST00000296129 NGRNQ9NPE2 291 aaKnown RBP18.49■□□□□ 0.55
CDCP1-201ENST00000296129 CPSF3Q9UKF6 684 aaKnown RBP18.49■□□□□ 0.55
CDCP1-201ENST00000296129 KIAA1210Q9ULL0 1709 aa18.49■□□□□ 0.55
CDCP1-201ENST00000296129 IQGAP1P46940 1657 aa18.49■□□□□ 0.55
CDCP1-201ENST00000296129 CLTAP09496 248 aa18.48■□□□□ 0.55
CDCP1-201ENST00000296129 ASPHQ12797 758 aa18.48■□□□□ 0.55
CDCP1-201ENST00000296129 MTMR2Q13614 643 aa18.48■□□□□ 0.55
CDCP1-201ENST00000296129 PSPC1Q8WXF1 523 aaKnown RBP18.48■□□□□ 0.55
CDCP1-201ENST00000296129 A0A0G2JLW4 131 aa18.48■□□□□ 0.55
CDCP1-201ENST00000296129 NCK2O43639 380 aa18.48■□□□□ 0.55
CDCP1-201ENST00000296129 CTNND1O60716 968 aaKnown RBP18.48■□□□□ 0.55
CDCP1-201ENST00000296129 TJP3O95049 919 aa18.48■□□□□ 0.55
CDCP1-201ENST00000296129 CFAP61Q8NHU2 1237 aa18.48■□□□□ 0.55
CDCP1-201ENST00000296129 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.48■□□□□ 0.55
CDCP1-201ENST00000296129 USP32Q8NFA0 1604 aa18.48■□□□□ 0.55
CDCP1-201ENST00000296129 ANKRD40Q6AI12 368 aa18.48■□□□□ 0.55
CDCP1-201ENST00000296129 DEPDC1BQ8WUY9 529 aa18.48■□□□□ 0.55
CDCP1-201ENST00000296129 CEMIPQ8WUJ3 1361 aa18.48■□□□□ 0.55
CDCP1-201ENST00000296129 SESN3P58005 492 aa18.48■□□□□ 0.55
CDCP1-201ENST00000296129 THOC5Q13769 683 aaKnown RBP18.48■□□□□ 0.55
CDCP1-201ENST00000296129 CDC42EP5Q6NZY7 148 aa18.48■□□□□ 0.55
CDCP1-201ENST00000296129 HEMGNQ9BXL5 484 aa18.48■□□□□ 0.55
CDCP1-201ENST00000296129 SENP2Q9HC62 589 aa18.48■□□□□ 0.55
CDCP1-201ENST00000296129 RCN2Q14257 317 aa18.48■□□□□ 0.55
CDCP1-201ENST00000296129 SPATA33Q96N06 139 aa18.48■□□□□ 0.55
CDCP1-201ENST00000296129 SYNGAP1Q96PV0 1343 aa18.48■□□□□ 0.55
CDCP1-201ENST00000296129 CCDC188H7C350 402 aa18.47■□□□□ 0.55
CDCP1-201ENST00000296129 ACSL3O95573 720 aa18.47■□□□□ 0.55
CDCP1-201ENST00000296129 HMGCS2P54868 508 aa18.47■□□□□ 0.55
CDCP1-201ENST00000296129 SEPT6Q14141 434 aa18.47■□□□□ 0.55
CDCP1-201ENST00000296129 ARL13BQ3SXY8 428 aa18.47■□□□□ 0.55
CDCP1-201ENST00000296129 MMEL1Q495T6 779 aa18.47■□□□□ 0.55
CDCP1-201ENST00000296129 CYFIP1Q7L576 1253 aa18.47■□□□□ 0.55
CDCP1-201ENST00000296129 HPS3Q969F9 1004 aa18.47■□□□□ 0.55
CDCP1-201ENST00000296129 TMEM35BQ8NCS4 154 aa18.47■□□□□ 0.55
CDCP1-201ENST00000296129 C11orf70Q9BRQ4 267 aa18.47■□□□□ 0.55
CDCP1-201ENST00000296129 NUP85Q9BW27 656 aa18.47■□□□□ 0.55
CDCP1-201ENST00000296129 IL25Q9H293 177 aa18.47■□□□□ 0.55
CDCP1-201ENST00000296129 GINM1Q9NU53 330 aa18.47■□□□□ 0.55
CDCP1-201ENST00000296129 KIDINS220Q9ULH0 1771 aa18.47■□□□□ 0.55
CDCP1-201ENST00000296129 TRIM49P0CI25 452 aa18.47■□□□□ 0.55
CDCP1-201ENST00000296129 TRIM49CP0CI26 452 aa18.47■□□□□ 0.55
CDCP1-201ENST00000296129 CNOT10Q9H9A5 744 aaKnown RBP18.47■□□□□ 0.55
CDCP1-201ENST00000296129 EYA4O95677 639 aa18.47■□□□□ 0.55
CDCP1-201ENST00000296129 KCNB1Q14721 858 aa18.47■□□□□ 0.55
CDCP1-201ENST00000296129 EPHA7Q15375 998 aa18.47■□□□□ 0.55
CDCP1-201ENST00000296129 PPP6R3Q5H9R7 873 aaPredicted RBP18.47■□□□□ 0.55
CDCP1-201ENST00000296129 C16orf86Q6ZW13 317 aa18.47■□□□□ 0.55
CDCP1-201ENST00000296129 CENPUQ71F23 418 aa18.47■□□□□ 0.55
CDCP1-201ENST00000296129 RAB44Q7Z6P3 723 aaPredicted RBP18.47■□□□□ 0.55
CDCP1-201ENST00000296129 TRIM42Q8IWZ5 723 aa18.47■□□□□ 0.55
CDCP1-201ENST00000296129 RGL1Q9NZL6 768 aa18.47■□□□□ 0.55
CDCP1-201ENST00000296129 TAF6LQ9Y6J9 622 aa18.47■□□□□ 0.55
CDCP1-201ENST00000296129 CEP170BQ9Y4F5 1589 aaPredicted RBP18.47■□□□□ 0.55
CDCP1-201ENST00000296129 MIF4GDA9UHW6 222 aaKnown RBP18.46■□□□□ 0.55
CDCP1-201ENST00000296129 NR1D1P20393 614 aa18.46■□□□□ 0.55
CDCP1-201ENST00000296129 PHLDB3Q6NSJ2 640 aa18.46■□□□□ 0.55
CDCP1-201ENST00000296129 ZNF746Q6NUN9 644 aaPredicted RBP18.46■□□□□ 0.55
CDCP1-201ENST00000296129 NFRKBQ6P4R8 1299 aa18.46■□□□□ 0.55
CDCP1-201ENST00000296129 PLAAQ9Y263 795 aa18.46■□□□□ 0.55
CDCP1-201ENST00000296129 SART1O43290 800 aaKnown RBP18.46■□□□□ 0.55
CDCP1-201ENST00000296129 ZNF564Q8TBZ8 553 aaPredicted RBP18.46■□□□□ 0.55
CDCP1-201ENST00000296129 PYROXD1Q8WU10 500 aa18.46■□□□□ 0.55
CDCP1-201ENST00000296129 GNAT1P11488 350 aa18.46■□□□□ 0.55
CDCP1-201ENST00000296129 TSTA3Q13630 321 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms