RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 PNMA2Q9UL42 364 aa18.41■□□□□ 0.54
SLC1A4-201ENST00000234256 FLT1P17948 1338 aa18.41■□□□□ 0.54
SLC1A4-201ENST00000234256 CEP170BQ9Y4F5 1589 aaPredicted RBP18.41■□□□□ 0.54
SLC1A4-201ENST00000234256 SART1O43290 800 aaKnown RBP18.41■□□□□ 0.54
SLC1A4-201ENST00000234256 NTSR2O95665 410 aa18.41■□□□□ 0.54
SLC1A4-201ENST00000234256 PSAPP07602 524 aa18.41■□□□□ 0.54
SLC1A4-201ENST00000234256 CNGA1P29973 690 aa18.41■□□□□ 0.54
SLC1A4-201ENST00000234256 PPP6R3Q5H9R7 873 aaPredicted RBP18.41■□□□□ 0.54
SLC1A4-201ENST00000234256 PHLDB3Q6NSJ2 640 aa18.41■□□□□ 0.54
SLC1A4-201ENST00000234256 DPP9Q86TI2 863 aa18.41■□□□□ 0.54
SLC1A4-201ENST00000234256 ERICH1Q86X53 443 aa18.41■□□□□ 0.54
SLC1A4-201ENST00000234256 TTLL6Q8N841 843 aa18.41■□□□□ 0.54
SLC1A4-201ENST00000234256 PYROXD1Q8WU10 500 aa18.41■□□□□ 0.54
SLC1A4-201ENST00000234256 SAYSD1Q9NPB0 183 aa18.41■□□□□ 0.54
SLC1A4-201ENST00000234256 FBXL5Q9UKA1 691 aa18.41■□□□□ 0.54
SLC1A4-201ENST00000234256 NOC2LQ9Y3T9 749 aaKnown RBP18.41■□□□□ 0.54
SLC1A4-201ENST00000234256 PPP1R3GB7ZBB8 358 aa18.4■□□□□ 0.54
SLC1A4-201ENST00000234256 CTIFO43310 598 aaKnown RBP18.4■□□□□ 0.54
SLC1A4-201ENST00000234256 RPS6KA2Q15349 733 aa18.4■□□□□ 0.54
SLC1A4-201ENST00000234256 C6orf118Q5T5N4 469 aa18.4■□□□□ 0.54
SLC1A4-201ENST00000234256 RINT1Q6NUQ1 792 aa18.4■□□□□ 0.54
SLC1A4-201ENST00000234256 CYFIP1Q7L576 1253 aa18.4■□□□□ 0.54
SLC1A4-201ENST00000234256 TADA2BQ86TJ2 420 aa18.4■□□□□ 0.54
SLC1A4-201ENST00000234256 SLC17A8Q8NDX2 589 aa18.4■□□□□ 0.54
SLC1A4-201ENST00000234256 DCPSQ96C86 337 aaKnown RBP18.4■□□□□ 0.54
SLC1A4-201ENST00000234256 CNOT10Q9H9A5 744 aaKnown RBP18.4■□□□□ 0.54
SLC1A4-201ENST00000234256 EHD2Q9NZN4 543 aa18.4■□□□□ 0.54
SLC1A4-201ENST00000234256 PLEKP08567 350 aaPredicted RBP18.4■□□□□ 0.54
SLC1A4-201ENST00000234256 ZNF18P17022 549 aa18.4■□□□□ 0.54
SLC1A4-201ENST00000234256 CIAPIN1Q6FI81 312 aa18.4■□□□□ 0.54
SLC1A4-201ENST00000234256 PDIK1LQ8N165 341 aa18.4■□□□□ 0.54
SLC1A4-201ENST00000234256 TBC1D16Q8TBP0 767 aa18.4■□□□□ 0.54
SLC1A4-201ENST00000234256 VCXQ9H320 206 aa18.4■□□□□ 0.54
SLC1A4-201ENST00000234256 TAF1DQ9H5J8 278 aaPredicted RBP18.4■□□□□ 0.54
SLC1A4-201ENST00000234256 ZBTB22O15209 634 aa18.4■□□□□ 0.54
SLC1A4-201ENST00000234256 GUCY2CP25092 1073 aa18.4■□□□□ 0.54
SLC1A4-201ENST00000234256 CCND2P30279 289 aa18.4■□□□□ 0.54
SLC1A4-201ENST00000234256 DNAAF3Q8N9W5 541 aa18.4■□□□□ 0.54
SLC1A4-201ENST00000234256 GIMAP8Q8ND71 665 aaPredicted RBP18.4■□□□□ 0.54
SLC1A4-201ENST00000234256 NSMCE1Q8WV22 266 aa18.4■□□□□ 0.54
SLC1A4-201ENST00000234256 QARSP47897 775 aaKnown RBP18.4■□□□□ 0.54
SLC1A4-201ENST00000234256 CCDC117Q8IWD4 279 aaPredicted RBP18.4■□□□□ 0.54
SLC1A4-201ENST00000234256 MCUQ8NE86 351 aa18.4■□□□□ 0.54
SLC1A4-201ENST00000234256 C1orf54Q8WWF1 131 aa18.4■□□□□ 0.54
SLC1A4-201ENST00000234256 ZNF512BQ96KM6 892 aaPredicted RBP18.4■□□□□ 0.54
SLC1A4-201ENST00000234256 MIS12Q9H081 205 aa18.4■□□□□ 0.54
SLC1A4-201ENST00000234256 INTS2Q9H0H0 1204 aaKnown RBP18.4■□□□□ 0.54
SLC1A4-201ENST00000234256 TACC3Q9Y6A5 838 aa18.4■□□□□ 0.54
SLC1A4-201ENST00000234256 DUSP10Q9Y6W6 482 aa18.4■□□□□ 0.54
SLC1A4-201ENST00000234256 ZHX2Q9Y6X8 837 aa18.4■□□□□ 0.54
SLC1A4-201ENST00000234256 MIF4GDA9UHW6 222 aaKnown RBP18.39■□□□□ 0.54
SLC1A4-201ENST00000234256 STXBP3O00186 592 aa18.39■□□□□ 0.54
SLC1A4-201ENST00000234256 TLR3O15455 904 aaKnown RBP18.39■□□□□ 0.54
SLC1A4-201ENST00000234256 KRT14P02533 472 aa18.39■□□□□ 0.54
SLC1A4-201ENST00000234256 COL9A3Q14050 684 aaPredicted RBP18.39■□□□□ 0.54
SLC1A4-201ENST00000234256 TFDP1Q14186 410 aa18.39■□□□□ 0.54
SLC1A4-201ENST00000234256 BEND6Q5SZJ8 279 aaPredicted RBP18.39■□□□□ 0.54
SLC1A4-201ENST00000234256 CFAP57Q96MR6 1250 aa18.39■□□□□ 0.54
SLC1A4-201ENST00000234256 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.39■□□□□ 0.547e-6■■□□□ 11.5
SLC1A4-201ENST00000234256 MKRN3Q13064 507 aaKnown RBP18.39■□□□□ 0.53
SLC1A4-201ENST00000234256 SWSAP1Q6NVH7 229 aa18.39■□□□□ 0.53
SLC1A4-201ENST00000234256 PDCD7Q8N8D1 485 aaKnown RBP18.39■□□□□ 0.53
SLC1A4-201ENST00000234256 HEXIM2Q96MH2 286 aaKnown RBP18.39■□□□□ 0.53
SLC1A4-201ENST00000234256 GABBR1Q9UBS5 961 aa18.39■□□□□ 0.53
SLC1A4-201ENST00000234256 PCSK1NQ9UHG2 260 aa18.39■□□□□ 0.53
SLC1A4-201ENST00000234256 WDR64B1ANS9 1081 aa18.39■□□□□ 0.53
SLC1A4-201ENST00000234256 PODXLO00592 558 aa18.39■□□□□ 0.53
SLC1A4-201ENST00000234256 CLDN3O15551 220 aa18.39■□□□□ 0.53
SLC1A4-201ENST00000234256 PDIA5Q14554 519 aa18.39■□□□□ 0.53
SLC1A4-201ENST00000234256 SBK1Q52WX2 424 aa18.39■□□□□ 0.53
SLC1A4-201ENST00000234256 CLTCQ00610 1675 aaKnown RBP18.39■□□□□ 0.53
SLC1A4-201ENST00000234256 NDUFB10O96000 172 aa18.39■□□□□ 0.53
SLC1A4-201ENST00000234256 HAUS6Q7Z4H7 955 aa18.39■□□□□ 0.53
SLC1A4-201ENST00000234256 ZNF564Q8TBZ8 553 aaPredicted RBP18.39■□□□□ 0.53
SLC1A4-201ENST00000234256 NUP85Q9BW27 656 aa18.39■□□□□ 0.53
SLC1A4-201ENST00000234256 CPP00450 1065 aa18.38■□□□□ 0.53
SLC1A4-201ENST00000234256 PDHBP11177 359 aa18.38■□□□□ 0.53
SLC1A4-201ENST00000234256 USP11P51784 963 aa18.38■□□□□ 0.53
SLC1A4-201ENST00000234256 CEP55Q53EZ4 464 aa18.38■□□□□ 0.53
SLC1A4-201ENST00000234256 TRIM59Q8IWR1 403 aa18.38■□□□□ 0.53
SLC1A4-201ENST00000234256 GABPB2Q8TAK5 448 aaPredicted RBP18.38■□□□□ 0.53
SLC1A4-201ENST00000234256 CDKL2Q92772 493 aa18.38■□□□□ 0.53
SLC1A4-201ENST00000234256 NUF2Q9BZD4 464 aa18.38■□□□□ 0.53
SLC1A4-201ENST00000234256 FAM49AQ9H0Q0 323 aaPredicted RBP18.38■□□□□ 0.53
SLC1A4-201ENST00000234256 RNF146Q9NTX7 359 aa18.38■□□□□ 0.53
SLC1A4-201ENST00000234256 INTUQ9ULD6 942 aa18.38■□□□□ 0.53
SLC1A4-201ENST00000234256 SYNGAP1Q96PV0 1343 aa18.38■□□□□ 0.53
SLC1A4-201ENST00000234256 MAGEA9P43362 315 aa18.38■□□□□ 0.53
SLC1A4-201ENST00000234256 ADCY2Q08462 1091 aa18.38■□□□□ 0.53
SLC1A4-201ENST00000234256 DDX42Q86XP3 938 aaKnown RBP eCLIP18.38■□□□□ 0.53
SLC1A4-201ENST00000234256 HSPH1Q92598 858 aa18.38■□□□□ 0.53
SLC1A4-201ENST00000234256 PITPNM3Q9BZ71 974 aa18.38■□□□□ 0.53
SLC1A4-201ENST00000234256 ZNF277Q9NRM2 450 aaPredicted RBP18.38■□□□□ 0.53
SLC1A4-201ENST00000234256 RBM12Q9NTZ6 932 aaKnown RBP18.38■□□□□ 0.53
SLC1A4-201ENST00000234256 CHORDC1Q9UHD1 332 aaPredicted RBP18.38■□□□□ 0.53
SLC1A4-201ENST00000234256 RASA4BC9J798 803 aa18.38■□□□□ 0.53
SLC1A4-201ENST00000234256 RASA4O43374 803 aa18.38■□□□□ 0.53
SLC1A4-201ENST00000234256 P4HBP07237 508 aaKnown RBP18.38■□□□□ 0.53
SLC1A4-201ENST00000234256 SLC18A3Q16572 532 aa18.38■□□□□ 0.53
SLC1A4-201ENST00000234256 FBXO33Q7Z6M2 555 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms