RNA–Protein interactions for RNA: ENSMUST00000106865.7

Ccdc47-202, Transcript of Coiled-coil domain-containing protein 47, mousemouse

TSL 1 (best) BASIC

Gene Ccdc47, Length 704 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-202ENSMUST00000106865 Plekha4Q8VC98 588 aa8.08□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Stk38Q91VJ4 465 aa8.08□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Pcdhb15Q91Y04 786 aa8.08□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 PigqQ9QYT7 581 aa8.08□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Nek3Q9R0A5 511 aa8.08□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Btbd19S4R1I0 287 aa8.08□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Bcorl1A2AQH4 1781 aa8.07□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Jakmip2D3YXK0 820 aa8.07□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Gm21981D3Z6Q6 369 aa8.07□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Pira2F8VQ94 680 aa8.07□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Gm4340L7N2C4 268 aa8.07□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Kifc2O08672 792 aa8.07□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Ess2O70279 479 aa8.07□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Surf1P09925 306 aa8.07□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Gnat2P50149 354 aa8.07□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Plekhf1Q3TB82 279 aa8.07□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Cnnm2Q3TWN3 875 aa8.07□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Tmed8Q3UHI4 326 aa8.07□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Slc38a10Q5I012 1090 aa8.07□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Cdc37Q61081 379 aa8.07□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Panx2Q6IMP4 677 aa8.07□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Polr3gQ6NXY9 223 aa8.07□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Usp17leQ7M764 540 aa8.07□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Pif1Q80SX8 650 aa8.07□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 MaobQ8BW75 520 aa8.07□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Kiaa1524Q8BWY9 907 aa8.07□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Lmbrd2Q8C561 694 aa8.07□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Zfp202Q8C879 641 aa8.07□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Bola3Q8CEI1 110 aa8.07□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Fam83aQ8K2P2 436 aa8.07□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 SdsQ8VBT2 327 aa8.07□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Nrbp1Q99J45 535 aa8.07□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Krt84Q99M73 603 aa8.07□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Plekho1Q9JIY0 408 aa8.07□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Piezo2Q8CD54 2822 aa8.07□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Mast3Q3U214 1321 aa8.06□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 SrcapA0A087WQ44 3271 aa8.06□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Gm15262A0A140LIQ5 728 aa8.06□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Trim34bJ3QNR8 485 aa8.06□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 DdcO88533 480 aa8.06□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Gria2P23819 883 aa8.06□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Fxr1Q61584 677 aaKnown RBP8.06□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Ifit1Q64282 463 aa8.06□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Spty2d1Q68FG3 682 aa8.06□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Kiaa0753Q6A000 959 aa8.06□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 PoliQ6R3M4 717 aa8.06□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Vps37dQ810I0 261 aa8.06□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Q8K2W9 541 aa8.06□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Ncoa5Q91W39 579 aaKnown RBP8.06□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Slc15a4Q91W98 574 aa8.06□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Rnf141Q99MB7 230 aa8.06□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Ceacam20Q9D2Z1 577 aa8.06□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Zbtb43Q9DAI4 467 aa8.06□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Zfp119aQ9JIC0 545 aa8.06□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Clic4Q9QYB1 253 aa8.06□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Speer4dL7N216 212 aa8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Cyp26a1O55127 497 aa8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Cd160O88875 185 aa8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Tnni2P13412 182 aa8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Cbx2P30658 519 aa8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Mtx1P47802 317 aa8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Atoh1P48985 351 aa8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Snrpa1P57784 255 aaKnown RBP8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Map6d1Q14BB9 191 aa8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Ell2Q3UKU1 639 aa8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Tmprss11eQ5S248 423 aa8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Rasa3Q60790 834 aa8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Ddx3yQ62095 658 aaKnown RBP8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Ces5aQ6AW46 575 aa8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Edrf1Q6GQV7 1239 aa8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Krt74Q6IFZ9 495 aa8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Ltv1Q6NSQ7 470 aaKnown RBP8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Acap3Q6NXL5 833 aa8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Cep135Q6P5D4 1140 aa8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Atp1a3Q6PIC6 1013 aa8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Kansl1Q80TG1 1036 aaKnown RBP8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Fam205cQ80YD3 371 aa8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Zfyve1Q810J8 777 aa8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Tmem169Q8BG50 297 aa8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Prkag3Q8BGM7 489 aa8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 F13a1Q8BH61 732 aa8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Q8BP99 230 aa8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Ccdc150Q8CDI7 1110 aa8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Rnf208Q8K0W3 265 aa8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Il31raQ8K5B1 716 aa8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 HnrnplQ8R081 586 aaKnown RBP8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Slc14a2Q8R4T9 930 aa8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Olfr99Q8VFE4 305 aa8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Vmn1r51Q8VIC6 319 aa8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Hdac9Q99N13 588 aa8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Stxbp4Q9WV89 557 aa8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 CpdO89001 1377 aa8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Med23Q80YQ2 1367 aa8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Rgs12Q8CGE9 1381 aa8.05□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Ms4a12A0A087WSB9 263 aa8.04□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Naaladl2A0A0N4SUJ3 795 aa8.04□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Frmd7A2AD83 703 aa8.04□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Tbc1d8bA3KGB4 1114 aa8.04□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Btn2a2A4QPC6 514 aa8.04□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Nova2D3YVV7 556 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 77.4 ms