RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Olfr394Q8VGR5 310 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Traf7Q922B6 594 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 HgsQ99LI8 775 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Tex12Q9CR81 123 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Mtfr1lQ9CWE0 289 aa9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Marf1Q8BJ34 1730 aaKnown RBP9.9□□□□□ -0.82
Upf3b-201ENSMUST00000076265 Kif1aP33173 1695 aa9.9□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Gm16486A0A1D5RMD1 1434 aa9.9□□□□□ -0.83
Upf3b-201ENSMUST00000076265 PtpruB1AUH1 1446 aa9.9□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Gm6657A0A1B0GRJ3 277 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 GabreA2AMW3 916 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Gm5819E9PZ96 154 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Krt78E9Q0F0 1068 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Ankrd35E9Q9D8 996 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Grk4O70291 574 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Sbk2P0C5K1 362 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Fam167bP17257 162 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Glycam1Q02596 151 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Krt26Q3TRJ4 462 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Ermp1Q3UVK0 898 aaKnown RBP9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Kiaa0754Q69ZZ9 979 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Lrig3Q6P1C6 1117 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 HaaoQ78JT3 286 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Adcy2Q80TL1 1090 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Fcho1Q8K285 873 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 TmieQ8K467 153 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Mfsd6lQ8R3N2 586 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Epsti1Q8VDI1 314 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Olfr397Q8VEZ6 315 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Lrrc59Q922Q8 307 aaKnown RBP9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Mtfr1Q99MB2 328 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Ttc25Q9D4B2 624 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 ProdhQ9WU79 599 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Rlbp1Q9Z275 317 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 9330159F19RikD3Z623 648 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 4933402N22RikF7D1B3 190 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Axin1O35625 863 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Art2bO35975 289 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Itm2bO89051 266 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Vav1P27870 845 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Mtx1P47802 317 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Rpl13P47963 211 aaKnown RBP9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Cyp2c38P56655 490 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Kcnj13P86046 360 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Lmntd2Q0VET5 664 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Pbxip1Q3TVI8 727 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Ncbp1Q3UYV9 790 aaKnown RBP9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 AsphQ8BSY0 741 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 CntrobQ8CB62 887 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Brf1Q8CFK2 676 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Asb2Q8K0L0 634 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Alg9Q8VDI9 611 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Lrrc71Q9D3W5 558 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Sall2Q9QX96 1004 aa9.89□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Atp10bB1AWN4 1474 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Tex14Q7M6U3 1450 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Apol7bB1AQP7 369 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Tsc22d2E9Q7M2 769 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Capn1O35350 713 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Nploc4P60670 608 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Kifap3P70188 793 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Fam187bQ0VAY3 358 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Rundc1Q0VDN7 615 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Ccdc160Q3UYG1 323 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Apol7eQ3UZ24 369 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Islr2Q5RKR3 745 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Dlx3Q64205 287 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Cand1Q6ZQ38 1230 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Ttc29Q80VM3 471 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Elac2Q80Y81 831 aaKnown RBP9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Ano1Q8BHY3 960 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Cep55Q8BT07 462 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Erlin1Q91X78 346 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Tas1r3Q925D8 858 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Card14Q99KF0 999 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 NosipQ9D6T0 301 aaKnown RBP9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Sgk1Q9WVC6 431 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 AadatQ9WVM8 425 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Fam135bQ9DAI6 1403 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Pgap3A2A559 320 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 GmlE9PX31 176 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Gm20517G3UVU6 152 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Gsto1O09131 240 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 GabrdP22933 449 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Cep76Q0VEJ0 659 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Coq10bQ3THF9 240 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 C87499Q3UX49 493 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Tmem40Q4FJU9 225 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 GpkowQ56A08 488 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Pcbp2Q61990 362 aaKnown RBP9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Ccpg1Q640L3 753 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 PapolgQ6PCL9 739 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Prrt3Q6PE13 971 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Naa15Q80UM3 865 aaKnown RBP9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Cfap100Q80VN0 613 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Olfm2Q8BM13 448 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Kank2Q8BX02 843 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Taf5Q8C092 801 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Bola3Q8CEI1 110 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Plekha4Q8VC98 588 aa9.88□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 30.3 ms