RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Pbx4Q99NE9 378 aa16.18■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Olr1Q9EQ09 363 aa16.18■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Tmod3Q9JHJ0 352 aa16.18■□□□□ 0.18
Ercc1-201ENSMUST00000003645 GraspQ9JJA9 392 aa16.18■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Add1Q9QYC0 735 aaKnown RBP16.18■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Fbxo16Q9QZM9 334 aa16.18■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Pex11aQ9Z211 246 aa16.18■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Ankrd16A2AS55 361 aa16.17■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Ttll10A4Q9F3 704 aa16.17■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Svs3aF2Z472 265 aa16.17■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Ly6dP35459 127 aa16.17■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Tmod1P49813 359 aa16.17■□□□□ 0.18
Ercc1-201ENSMUST00000003645 PtgdrP70263 357 aa16.17■□□□□ 0.18
Ercc1-201ENSMUST00000003645 HmgcrQ01237 887 aa16.17■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Xkr4Q5GH67 647 aa16.17■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Elf1Q60775 612 aa16.17■□□□□ 0.18
Ercc1-201ENSMUST00000003645 March6Q6ZQ89 909 aa16.17■□□□□ 0.18
Ercc1-201ENSMUST00000003645 TbataQ7TSD4 393 aa16.17■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Suz12Q80U70 741 aaKnown RBP16.17■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Gpc2Q8BKV1 579 aa16.17■□□□□ 0.18
Ercc1-201ENSMUST00000003645 VcpkmtQ8C436 228 aa16.17■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Dmtf1Q8CE22 761 aa16.17■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Exoc1Q8R3S6 894 aa16.17■□□□□ 0.18
Ercc1-201ENSMUST00000003645 BrdtQ91Y44 956 aa16.17■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Med15Q924H2 789 aa16.17■□□□□ 0.18
Ercc1-201ENSMUST00000003645 TtpalQ9D3D0 343 aa16.17■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Magi2Q9WVQ1 1275 aa16.17■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Btg4O70552 250 aa16.16■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Adssl1P28650 457 aa16.16■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Tap2P36371 702 aa16.16■□□□□ 0.18
Ercc1-201ENSMUST00000003645 GlrbP48168 496 aa16.16■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Spink5Q148R4 1017 aa16.16■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Mief2Q5NCS9 454 aa16.16■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Cd37Q61470 281 aa16.16■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Ntan1Q64311 310 aa16.16■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Ctnna3Q65CL1 895 aa16.16■□□□□ 0.18
Ercc1-201ENSMUST00000003645 C6.1alQ7M757 291 aa16.16■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Drd5Q8BLD9 478 aa16.16■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Olfml1Q8BSH2 233 aa16.16■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Slc38a7Q8BWH0 463 aa16.16■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Tmem161bQ8C2L6 487 aa16.16■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Tmem63cQ8CBX0 802 aa16.16■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Ca9Q8VHB5 437 aa16.16■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Fubp1Q91WJ8 651 aaKnown RBP16.16■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Smc1bQ920F6 1248 aa16.16■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Zfp623Q9CY99 499 aa16.16■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Thap2Q9D305 217 aa16.16■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Drc3Q9D5E4 523 aa16.16■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Arih1Q9Z1K5 555 aa16.16■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Fam129cD3YZB0 591 aa16.15■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Clca3bE9PUL3 1044 aa16.15■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Rnaseh1O70338 285 aa16.15■□□□□ 0.18
Ercc1-201ENSMUST00000003645 P01734 135 aa16.15■□□□□ 0.18
Ercc1-201ENSMUST00000003645 GpiP06745 558 aaKnown RBP16.15■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Ptpn11P35235 597 aa16.15■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Ogfod1Q3U0K8 545 aa16.15■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Tgfbrap1Q3UR70 860 aa16.15■□□□□ 0.18
Ercc1-201ENSMUST00000003645 DeptorQ570Y9 409 aa16.15■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Cyp3a11Q64459 504 aa16.15■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Slc15a5Q8CBB2 566 aa16.15■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Mettl24Q8CCB5 363 aa16.15■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Tbc1d13Q8R3D1 400 aa16.15■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Olfr1494Q8VGP8 315 aa16.15■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Acot11Q8VHQ9 594 aa16.15■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Nrbp1Q99J45 535 aa16.15■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Syce1Q9D495 329 aa16.15■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Prl2b1Q9DAZ2 228 aa16.15■□□□□ 0.18
Ercc1-201ENSMUST00000003645 CoasyQ9DBL7 563 aa16.15■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Nek3Q9R0A5 511 aa16.15■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Wdr81Q5ND34 1934 aa16.15■□□□□ 0.18
Ercc1-201ENSMUST00000003645 Gm21973F6WEZ7 68 aa16.14■□□□□ 0.17
Ercc1-201ENSMUST00000003645 Efna5O08543 228 aa16.14■□□□□ 0.17
Ercc1-201ENSMUST00000003645 PtenO08586 403 aa16.14■□□□□ 0.17
Ercc1-201ENSMUST00000003645 Chrna1P04756 457 aa16.14■□□□□ 0.17
Ercc1-201ENSMUST00000003645 Cyp2c38P56655 490 aa16.14■□□□□ 0.17
Ercc1-201ENSMUST00000003645 Tfdp1Q08639 410 aa16.14■□□□□ 0.17
Ercc1-201ENSMUST00000003645 Oog4Q4G0C7 502 aa16.14■□□□□ 0.17
Ercc1-201ENSMUST00000003645 Wdr18Q4VBE8 431 aa16.14■□□□□ 0.17
Ercc1-201ENSMUST00000003645 Tsg101Q61187 391 aa16.14■□□□□ 0.17
Ercc1-201ENSMUST00000003645 Tcaf3Q6QR59 914 aa16.14■□□□□ 0.17
Ercc1-201ENSMUST00000003645 Zbed4Q80WQ9 1168 aa16.14■□□□□ 0.17
Ercc1-201ENSMUST00000003645 Mfap3Q922T2 349 aa16.14■□□□□ 0.17
Ercc1-201ENSMUST00000003645 Kif17Q99PW8 1038 aa16.14■□□□□ 0.17
Ercc1-201ENSMUST00000003645 Cfap45Q9D9U9 551 aa16.14■□□□□ 0.17
Ercc1-201ENSMUST00000003645 DcpsQ9DAR7 338 aa16.14■□□□□ 0.17
Ercc1-201ENSMUST00000003645 Akt3Q9WUA6 479 aa16.14■□□□□ 0.17
Ercc1-201ENSMUST00000003645 Lcmt1A0A0U1RNF2 332 aa16.13■□□□□ 0.17
Ercc1-201ENSMUST00000003645 Gm5934D3Z4U6 212 aa16.13■□□□□ 0.17
Ercc1-201ENSMUST00000003645 Gm4788E9Q8B5 879 aa16.13■□□□□ 0.17
Ercc1-201ENSMUST00000003645 Irf8P23611 424 aa16.13■□□□□ 0.17
Ercc1-201ENSMUST00000003645 IppP28575 584 aa16.13■□□□□ 0.17
Ercc1-201ENSMUST00000003645 Ccr5P51682 354 aa16.13■□□□□ 0.17
Ercc1-201ENSMUST00000003645 WasP70315 520 aa16.13■□□□□ 0.17
Ercc1-201ENSMUST00000003645 Ift88Q61371 824 aa16.13■□□□□ 0.17
Ercc1-201ENSMUST00000003645 Pank4Q80YV4 820 aa16.13■□□□□ 0.17
Ercc1-201ENSMUST00000003645 GanQ8CA72 597 aa16.13■□□□□ 0.17
Ercc1-201ENSMUST00000003645 Adgrg3Q8R0T6 542 aa16.13■□□□□ 0.17
Ercc1-201ENSMUST00000003645 Ero1aQ8R180 464 aa16.13■□□□□ 0.17
Ercc1-201ENSMUST00000003645 Reep2Q8VCD6 254 aa16.13■□□□□ 0.17
Ercc1-201ENSMUST00000003645 Olfr390Q8VEZ7 311 aa16.13■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 31.8 ms