RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 GEX1P25596 615 aa-1.96□□□□□ -2.72
snR53snR53 APE3P37302 537 aaKnown RBP-1.96□□□□□ -2.72
snR53snR53 IST2P38250 946 aa-1.96□□□□□ -2.72
snR53snR53 RFC3P38629 340 aa-1.96□□□□□ -2.72
snR53snR53 YHL041WP38730 149 aa-1.96□□□□□ -2.72
snR53snR53 YJR141WP47172 347 aaPredicted RBP-1.96□□□□□ -2.72
snR53snR53 TRM112P53738 135 aaPredicted RBP-1.96□□□□□ -2.72
snR53snR53 YSA1Q01976 231 aa-1.96□□□□□ -2.72
snR53snR53 MET14Q02196 202 aa-1.96□□□□□ -2.72
snR53snR53 YBR056W-AI2HB52 66 aa-1.97□□□□□ -2.72
snR53snR53 MRPL20P22354 195 aaPredicted RBP-1.97□□□□□ -2.72
snR53snR53 SKI2P35207 1287 aaKnown RBP RIP-Chip data-1.97□□□□□ -2.72not detected
snR53snR53 YBL029WP38201 376 aa-1.97□□□□□ -2.72
snR53snR53 YHR045WP38775 560 aa-1.97□□□□□ -2.72
snR53snR53 MEX67Q99257 599 aaKnown RBP-1.97□□□□□ -2.72
snR53snR53 DOA4P32571 926 aa-1.98□□□□□ -2.73
snR53snR53 RRG9P40156 214 aa-1.98□□□□□ -2.73
snR53snR53 VTC2P43585 828 aa-1.98□□□□□ -2.73
snR53snR53 AIM23P47015 356 aa-1.98□□□□□ -2.73
snR53snR53 MMR1Q06324 491 aa-1.98□□□□□ -2.73
snR53snR53 CSI2Q08054 341 aa-1.98□□□□□ -2.73
snR53snR53 RIO1Q12196 484 aaKnown RBP-1.98□□□□□ -2.73
snR53snR53 ATG34Q12292 412 aa-1.98□□□□□ -2.73
snR53snR53 HEM4P06174 275 aa-1.99□□□□□ -2.73
snR53snR53 YOL163WP0CF20 169 aa-1.99□□□□□ -2.73
snR53snR53 PTP2P29461 750 aa-1.99□□□□□ -2.73
snR53snR53 YBR219CP38317 127 aa-1.99□□□□□ -2.73
snR53snR53 GPI16P38875 610 aa-1.99□□□□□ -2.73
snR53snR53 YGL118CP53132 145 aa-1.99□□□□□ -2.73
snR53snR53 FOL1P53848 824 aa-1.99□□□□□ -2.73
snR53snR53 SPR6Q01684 191 aa-1.99□□□□□ -2.73
snR53snR53 SOR2Q07786 357 aa-1.99□□□□□ -2.73
snR53snR53 PRR2Q12310 699 aa-1.99□□□□□ -2.73
snR53snR53 DCN1Q12395 269 aa-1.99□□□□□ -2.73
snR53snR53 SKM1Q12469 655 aa-1.99□□□□□ -2.73
snR53snR53 RPS14AP06367 137 aaKnown RBP-2□□□□□ -2.73
snR53snR53 SPS4P09937 338 aa-2□□□□□ -2.73
snR53snR53 PMT2P31382 759 aa-2□□□□□ -2.73
snR53snR53 ERG3P32353 365 aa-2□□□□□ -2.73
snR53snR53 KRE6P32486 720 aa-2□□□□□ -2.73
snR53snR53 GPX2P38143 162 aa-2□□□□□ -2.73
snR53snR53 RPS14BP39516 138 aaKnown RBP-2□□□□□ -2.73
snR53snR53 MIC19P43594 170 aa-2□□□□□ -2.73
snR53snR53 HIS3P06633 220 aa-2.01□□□□□ -2.73
snR53snR53 GPH1P06738 902 aaKnown RBP-2.01□□□□□ -2.73
snR53snR53 ATP1P07251 545 aaKnown RBP-2.01□□□□□ -2.73
snR53snR53 RNA15P25299 296 aaPredicted RBP-2.01□□□□□ -2.73
snR53snR53 RHB1P25378 209 aa-2.01□□□□□ -2.73
snR53snR53 PAF1P38351 445 aa-2.01□□□□□ -2.73
snR53snR53 EFM1P38732 585 aa-2.01□□□□□ -2.73
snR53snR53 UTP25P40498 721 aaKnown RBP-2.01□□□□□ -2.73
snR53snR53 VMA13P41807 478 aaKnown RBP-2.01□□□□□ -2.73
snR53snR53 CWC22P53333 577 aaKnown RBP-2.01□□□□□ -2.73
snR53snR53 MDM30Q05930 598 aa-2.01□□□□□ -2.73
snR53snR53 YOR292CQ08743 309 aa-2.01□□□□□ -2.73
snR53snR53 PAB1P04147 577 aaKnown RBP RIP-Chip data-2.02□□□□□ -2.73not detected
snR53snR53 DPM1P14020 267 aaKnown RBP-2.02□□□□□ -2.73
snR53snR53 CDC42P19073 191 aa-2.02□□□□□ -2.73
snR53snR53 PPH21P23594 369 aa-2.02□□□□□ -2.73
snR53snR53 MIR1P23641 311 aaKnown RBP-2.02□□□□□ -2.73
snR53snR53 ACA1P39970 489 aa-2.02□□□□□ -2.73
snR53snR53 NGL3Q03210 505 aa-2.02□□□□□ -2.73
snR53snR53 GIR2Q03768 265 aaPredicted RBP-2.02□□□□□ -2.73
snR53snR53 YDL109CQ12103 647 aa-2.02□□□□□ -2.73
snR53snR53 ALG1P16661 449 aa-2.03□□□□□ -2.73
snR53snR53 MDH1P17505 334 aaKnown RBP RIP-Chip data-2.03□□□□□ -2.73not detected
snR53snR53 PRE7P23724 241 aaKnown RBP-2.03□□□□□ -2.73
snR53snR53 FPR3P38911 411 aaKnown RBP-2.03□□□□□ -2.73
snR53snR53 MRPL49P40858 161 aaPredicted RBP-2.03□□□□□ -2.73
snR53snR53 RPS0BP46654 252 aaKnown RBP-2.03□□□□□ -2.73
snR53snR53 HIT1P46973 164 aa-2.03□□□□□ -2.73
snR53snR53 URH1Q04179 340 aa-2.03□□□□□ -2.73
snR53snR53 RCN2Q12044 265 aa-2.03□□□□□ -2.73
snR53snR53 YPL119C-AQ3E751 87 aa-2.03□□□□□ -2.73
snR53snR53 YTA7P40340 1379 aa-2.03□□□□□ -2.73
snR53snR53 RPL23AP0CX41 137 aaKnown RBP-2.04□□□□□ -2.74
snR53snR53 RPL23BP0CX42 137 aaKnown RBP-2.04□□□□□ -2.74
snR53snR53 RPL16AP26784 199 aaKnown RBP-2.04□□□□□ -2.74
snR53snR53 TIR2P33890 251 aa-2.04□□□□□ -2.74
snR53snR53 MND1P53102 219 aa-2.04□□□□□ -2.74
snR53snR53 YGR117CP53270 476 aa-2.04□□□□□ -2.74
snR53snR53 BIO4P53630 237 aa-2.04□□□□□ -2.74
snR53snR53 UBX4P54730 416 aa-2.04□□□□□ -2.74
snR53snR53 YML133CQ03099 1374 aa-2.04□□□□□ -2.74
snR53snR53 SNT309Q06091 175 aaPredicted RBP-2.04□□□□□ -2.74
snR53snR53 YLL067CQ07888 1374 aa-2.04□□□□□ -2.74
snR53snR53 YJR112W-AQ3E743 109 aa-2.04□□□□□ -2.74
snR53snR53 YLL066CQ99208 1374 aa-2.04□□□□□ -2.74
snR53snR53 CSE1P33307 960 aa-2.05□□□□□ -2.74
snR53snR53 SLC1P33333 303 aa-2.05□□□□□ -2.74
snR53snR53 YEL057CP39983 233 aa-2.05□□□□□ -2.74
snR53snR53 ICE2P40499 491 aa-2.05□□□□□ -2.74
snR53snR53 YGL114WP53134 725 aa-2.05□□□□□ -2.74
snR53snR53 MMT1Q03218 510 aa-2.05□□□□□ -2.74
snR53snR53 CAB5Q03941 241 aa-2.05□□□□□ -2.74
snR53snR53 VPS63O13549 108 aa-2.06□□□□□ -2.74
snR53snR53 RPL19AP0CX82 189 aaKnown RBP-2.06□□□□□ -2.74
snR53snR53 RPL19BP0CX83 189 aaPredicted RBP-2.06□□□□□ -2.74
snR53snR53 COY1P34237 679 aa-2.06□□□□□ -2.74
snR53snR53 YDR089WP38966 869 aa-2.06□□□□□ -2.74
Retrieved 100 of 5,963 RNA–protein pairs in 136.7 ms