RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR47, Length 99 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR47snR47 SNT309Q06091 175 aaPredicted RBP-1.01□□□□□ -2.57
snR47snR47 GAS2Q06135 555 aa-1.01□□□□□ -2.57
snR47snR47 SOR2Q07786 357 aa-1.01□□□□□ -2.57
snR47snR47 MMT2Q08970 484 aa-1.01□□□□□ -2.57
snR47snR47 TIM22Q12328 207 aa-1.01□□□□□ -2.57
snR47snR47 MEX67Q99257 599 aaKnown RBP-1.01□□□□□ -2.57
snR47snR47 BGL2P15703 313 aaKnown RBP-1.02□□□□□ -2.57
snR47snR47 NIP1P32497 812 aaKnown RBP-1.02□□□□□ -2.57
snR47snR47 SEC66P33754 206 aa-1.02□□□□□ -2.57
snR47snR47 ZRT3P34240 503 aa-1.02□□□□□ -2.57
snR47snR47 SKI2P35207 1287 aaKnown RBP RIP-Chip data-1.02□□□□□ -2.57not detected
snR47snR47 SPO77Q06134 477 aa-1.02□□□□□ -2.57
snR47snR47 YOL160WQ08321 113 aa-1.02□□□□□ -2.57
snR47snR47 RKM1Q08961 583 aaPredicted RBP-1.02□□□□□ -2.57
snR47snR47 NMD4Q12129 218 aa-1.02□□□□□ -2.57
snR47snR47 SKM1Q12469 655 aa-1.02□□□□□ -2.57
snR47snR47 HEM4P06174 275 aa-1.03□□□□□ -2.57
snR47snR47 CPA1P07258 411 aaKnown RBP-1.03□□□□□ -2.57
snR47snR47 YOL163WP0CF20 169 aa-1.03□□□□□ -2.57
snR47snR47 CHS3P29465 1165 aa-1.03□□□□□ -2.57
snR47snR47 GPX2P38143 162 aa-1.03□□□□□ -2.57
snR47snR47 TAE1P38340 232 aa-1.03□□□□□ -2.57
snR47snR47 TCD1P38756 429 aa-1.03□□□□□ -2.57
snR47snR47 YHR045WP38775 560 aa-1.03□□□□□ -2.57
snR47snR47 CIS3P47001 227 aa-1.03□□□□□ -2.57
snR47snR47 MND1P53102 219 aa-1.03□□□□□ -2.57
snR47snR47 YGR066CP53242 292 aa-1.03□□□□□ -2.57
snR47snR47 SLM2P53955 656 aa-1.03□□□□□ -2.57
snR47snR47 RTN2Q12443 393 aa-1.03□□□□□ -2.57
snR47snR47 TDH1P00360 332 aaKnown RBP-1.04□□□□□ -2.58
snR47snR47 SCEIP03882 235 aa-1.04□□□□□ -2.58
snR47snR47 FUM1P08417 488 aaKnown RBP-1.04□□□□□ -2.58
snR47snR47 DPM1P14020 267 aaKnown RBP-1.04□□□□□ -2.58
snR47snR47 ALG1P16661 449 aa-1.04□□□□□ -2.58
snR47snR47 MIR1P23641 311 aaKnown RBP-1.04□□□□□ -2.58
snR47snR47 FLC2P39719 783 aa-1.04□□□□□ -2.58
snR47snR47 YIL054WP40524 105 aa-1.04□□□□□ -2.58
snR47snR47 AIM23P47015 356 aa-1.04□□□□□ -2.58
snR47snR47 YJR141WP47172 347 aaPredicted RBP-1.04□□□□□ -2.58
snR47snR47 YGR117CP53270 476 aa-1.04□□□□□ -2.58
snR47snR47 SCS7Q03529 384 aa-1.04□□□□□ -2.58
snR47snR47 TMA7Q3E764 64 aaKnown RBP-1.04□□□□□ -2.58
snR47snR47 HIS3P06633 220 aa-1.05□□□□□ -2.58
snR47snR47 DFR1P07807 211 aaKnown RBP RIP-Chip data-1.05□□□□□ -2.58not detected
snR47snR47 RPL2AP0CX45 254 aaKnown RBP-1.05□□□□□ -2.58
snR47snR47 RPL2BP0CX46 254 aaKnown RBP-1.05□□□□□ -2.58
snR47snR47 RHB1P25378 209 aa-1.05□□□□□ -2.58
snR47snR47 RRT12P25381 491 aa-1.05□□□□□ -2.58
snR47snR47 YCR102CP25608 368 aa-1.05□□□□□ -2.58
snR47snR47 ITR2P30606 609 aa-1.05□□□□□ -2.58
snR47snR47 PMT2P31382 759 aa-1.05□□□□□ -2.58
snR47snR47 SLC1P33333 303 aa-1.05□□□□□ -2.58
snR47snR47 PSY4P38193 441 aa-1.05□□□□□ -2.58
snR47snR47 UTP25P40498 721 aaKnown RBP-1.05□□□□□ -2.58
snR47snR47 MRPL49P40858 161 aaPredicted RBP-1.05□□□□□ -2.58
snR47snR47 LYS14P40971 790 aa-1.05□□□□□ -2.58
snR47snR47 EFM3P47163 339 aa-1.05□□□□□ -2.58
snR47snR47 TRM112P53738 135 aaPredicted RBP-1.05□□□□□ -2.58
snR47snR47 UBX4P54730 416 aa-1.05□□□□□ -2.58
snR47snR47 INP1Q03694 420 aa-1.05□□□□□ -2.58
snR47snR47 RIO1Q12196 484 aaKnown RBP-1.05□□□□□ -2.58
snR47snR47 ATP1P07251 545 aaKnown RBP-1.06□□□□□ -2.58
snR47snR47 ROX1P25042 368 aa-1.06□□□□□ -2.58
snR47snR47 TIR2P33890 251 aa-1.06□□□□□ -2.58
snR47snR47 MCR1P36060 302 aaKnown RBP-1.06□□□□□ -2.58
snR47snR47 TWF1P53250 332 aa-1.06□□□□□ -2.58
snR47snR47 CWC22P53333 577 aaKnown RBP-1.06□□□□□ -2.58
snR47snR47 SPR6Q01684 191 aa-1.06□□□□□ -2.58
snR47snR47 MMT1Q03218 510 aa-1.06□□□□□ -2.58
snR47snR47 YDL109CQ12103 647 aa-1.06□□□□□ -2.58
snR47snR47 BUG1Q12191 341 aa-1.06□□□□□ -2.58
snR47snR47 YBR126W-AQ8TGU7 68 aa-1.06□□□□□ -2.58
snR47snR47 ERG3P32353 365 aa-1.07□□□□□ -2.58
snR47snR47 RPS0BP46654 252 aaKnown RBP-1.07□□□□□ -2.58
snR47snR47 ACT1P60010 375 aaKnown RBP-1.07□□□□□ -2.58
snR47snR47 YMR007WQ03675 126 aa-1.07□□□□□ -2.58
snR47snR47 YDR131CQ03899 556 aa-1.07□□□□□ -2.58
snR47snR47 MMR1Q06324 491 aa-1.07□□□□□ -2.58
snR47snR47 CBP2P03874 630 aaPredicted RBP-1.08□□□□□ -2.58
snR47snR47 RPL23AP0CX41 137 aaKnown RBP-1.08□□□□□ -2.58
snR47snR47 RPL23BP0CX42 137 aaKnown RBP-1.08□□□□□ -2.58
snR47snR47 MDH1P17505 334 aaKnown RBP RIP-Chip data-1.08□□□□□ -2.58not detected
snR47snR47 CSE1P33307 960 aa-1.08□□□□□ -2.58
snR47snR47 KAP123P40069 1113 aaKnown RBP-1.08□□□□□ -2.58
snR47snR47 LCB2P40970 561 aa-1.08□□□□□ -2.58
snR47snR47 RPL10P41805 221 aaKnown RBP-1.08□□□□□ -2.58
snR47snR47 YMR010WQ03687 405 aa-1.08□□□□□ -2.58
snR47snR47 GRH1Q04410 372 aaKnown RBP-1.08□□□□□ -2.58
snR47snR47 YOR292CQ08743 309 aa-1.08□□□□□ -2.58
snR47snR47 PRR2Q12310 699 aa-1.08□□□□□ -2.58
snR47snR47 VPS63O13549 108 aa-1.09□□□□□ -2.58
snR47snR47 ZWF1P11412 505 aaKnown RBP-1.09□□□□□ -2.58
snR47snR47 CDC42P19073 191 aa-1.09□□□□□ -2.58
snR47snR47 PRE7P23724 241 aaKnown RBP-1.09□□□□□ -2.58
snR47snR47 SLM5P25345 492 aaKnown RBP-1.09□□□□□ -2.58
snR47snR47 RPL16AP26784 199 aaKnown RBP-1.09□□□□□ -2.58
snR47snR47 BEM1P29366 551 aa-1.09□□□□□ -2.58
snR47snR47 CST26P38226 397 aa-1.09□□□□□ -2.58
snR47snR47 HXT14P42833 540 aa-1.09□□□□□ -2.58
snR47snR47 ABM1P47146 123 aa-1.09□□□□□ -2.58
Retrieved 100 of 5,963 RNA–protein pairs in 52.5 ms