RNA–Protein interactions for RNA: YBL022C

PIM1, Transcript of ATP-dependent Lon protease, yeast

Gene PIM1, Length 3,402 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PIM1	YBL022C	RAD27	P26793	382 aa		3.84	□□□□□ -1.79
PIM1	YBL022C	RPD3	P32561	433 aa		3.84	□□□□□ -1.79
PIM1	YBL022C	VPH1	P32563	840 aa	Known RBP	3.84	□□□□□ -1.79
PIM1	YBL022C	MAL32	P38158	584 aa		3.84	□□□□□ -1.79
PIM1	YBL022C	COS10	P52924	374 aa		3.84	□□□□□ -1.79
PIM1	YBL022C	JAC1	P53193	184 aa		3.84	□□□□□ -1.79
PIM1	YBL022C	TIM13	P53299	105 aa		3.84	□□□□□ -1.79
PIM1	YBL022C	MAL12	P53341	584 aa		3.84	□□□□□ -1.79
PIM1	YBL022C	MEP3	P53390	489 aa		3.84	□□□□□ -1.79
PIM1	YBL022C	CTL1	Q03220	320 aa	Known RBP	3.84	□□□□□ -1.79
PIM1	YBL022C	MRPS17	Q03246	237 aa	Predicted RBP	3.84	□□□□□ -1.79
PIM1	YBL022C	YOR059C	Q08448	450 aa	Known RBP	3.84	□□□□□ -1.79
PIM1	YBL022C	TRE2	Q08693	809 aa		3.84	□□□□□ -1.79
PIM1	YBL022C	DDC1	Q08949	612 aa		3.84	□□□□□ -1.79
PIM1	YBL022C	UPC2	Q12151	913 aa		3.84	□□□□□ -1.79
PIM1	YBL022C	ARP7	Q12406	477 aa		3.84	□□□□□ -1.79
PIM1	YBL022C	SUS1	Q6WNK7	96 aa		3.84	□□□□□ -1.79
PIM1	YBL022C	HXK2	P04807	486 aa	Known RBP	3.84	□□□□□ -1.8
PIM1	YBL022C	CDC4	P07834	779 aa		3.84	□□□□□ -1.8
PIM1	YBL022C	YCP4	P25349	247 aa	Known RBP	3.84	□□□□□ -1.8
PIM1	YBL022C	SFK1	P35735	353 aa		3.84	□□□□□ -1.8
PIM1	YBL022C	PEX32	P38292	413 aa		3.84	□□□□□ -1.8
PIM1	YBL022C	PEX28	P38848	579 aa		3.84	□□□□□ -1.8
PIM1	YBL022C	PRM2	P40534	656 aa		3.84	□□□□□ -1.8
PIM1	YBL022C	GAB1	P41733	394 aa		3.84	□□□□□ -1.8
PIM1	YBL022C	NIT2	P47016	307 aa		3.84	□□□□□ -1.8
PIM1	YBL022C	ASN1	P49089	572 aa	Known RBP	3.84	□□□□□ -1.8
PIM1	YBL022C	SOL1	P50278	321 aa		3.84	□□□□□ -1.8
PIM1	YBL022C	SDT1	P53078	280 aa		3.84	□□□□□ -1.8
PIM1	YBL022C	YGL117W	P53133	265 aa		3.84	□□□□□ -1.8
PIM1	YBL022C	YGR151C	P53287	111 aa		3.84	□□□□□ -1.8
PIM1	YBL022C	FMP41	P53889	259 aa	Known RBP	3.84	□□□□□ -1.8
PIM1	YBL022C	SPP2	Q02521	185 aa		3.84	□□□□□ -1.8
PIM1	YBL022C	HLR1	Q04429	423 aa		3.84	□□□□□ -1.8
PIM1	YBL022C	CTR3	Q06686	241 aa		3.84	□□□□□ -1.8
PIM1	YBL022C	NRT1	Q08485	598 aa		3.84	□□□□□ -1.8
PIM1	YBL022C	RPN5	Q12250	445 aa	Known RBP	3.84	□□□□□ -1.8
PIM1	YBL022C	YGR161W-C	Q3E744	92 aa		3.84	□□□□□ -1.8
PIM1	YBL022C	PNO1	Q99216	274 aa	Known RBP	3.84	□□□□□ -1.8
PIM1	YBL022C	TIM9	O74700	87 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	RPL9A	P05738	191 aa	Known RBP	3.83	□□□□□ -1.8
PIM1	YBL022C	PRP2	P20095	876 aa	Predicted RBP	3.83	□□□□□ -1.8
PIM1	YBL022C	SYN8	P31377	255 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	OAC1	P32332	324 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	WBP1	P33767	430 aa	Known RBP	3.83	□□□□□ -1.8
PIM1	YBL022C	POP7	P38291	140 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	RPN11	P43588	306 aa	Known RBP	3.83	□□□□□ -1.8
PIM1	YBL022C	COX16	P47081	118 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	PHO23	P50947	330 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	RPL9B	P51401	191 aa	Known RBP	3.83	□□□□□ -1.8
PIM1	YBL022C	YGL039W	P53183	348 aa	Known RBP	3.83	□□□□□ -1.8
PIM1	YBL022C	SHY1	P53266	389 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	ASI3	P53983	676 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	RHO3	Q00245	231 aa	Known RBP	3.83	□□□□□ -1.8
PIM1	YBL022C	CTK1	Q03957	528 aa	Known RBP	3.83	□□□□□ -1.8
PIM1	YBL022C	YEL009C-A	A0A023PZF2	135 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	SIR2	P06700	562 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	RPP1B	P10622	106 aa	Known RBP	3.83	□□□□□ -1.8
PIM1	YBL022C	SAM35	P14693	329 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	AMD1	P15274	810 aa	Known RBP	3.83	□□□□□ -1.8
PIM1	YBL022C	SPO7	P18410	259 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	CPR4	P25334	318 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	GUT1	P32190	709 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	YNK1	P36010	153 aa	Known RBP	3.83	□□□□□ -1.8
PIM1	YBL022C	VBA5	P36172	582 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	ASC1	P38011	319 aa	Known RBP	3.83	□□□□□ -1.8
PIM1	YBL022C	COS8	P38723	381 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	YDR415C	Q04033	374 aa	Predicted RBP	3.83	□□□□□ -1.8
PIM1	YBL022C	YMR087W	Q04299	284 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	MSC3	Q05812	728 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	ISR1	Q06098	443 aa	Known RBP	3.83	□□□□□ -1.8
PIM1	YBL022C	MRL1	Q06815	381 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	MRH1	Q12117	320 aa	Predicted RBP	3.83	□□□□□ -1.8
PIM1	YBL022C	YOL114C	Q12322	202 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	EAF3	Q12432	401 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	ERP4	Q12450	207 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	HTB1	P02293	131 aa	Known RBP	3.83	□□□□□ -1.8
PIM1	YBL022C	HTB2	P02294	131 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	HAP2	P06774	265 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	SPS4	P09937	338 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	ART10	P18634	518 aa	Known RBP	3.83	□□□□□ -1.8
PIM1	YBL022C	AAT2	P23542	418 aa	Known RBP	3.83	□□□□□ -1.8
PIM1	YBL022C	LRE1	P25579	583 aa	Known RBP	3.83	□□□□□ -1.8
PIM1	YBL022C	COQ3	P27680	312 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	MIG1	P27705	504 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	FUN26	P31381	517 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	SNC2	P33328	115 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	AIM3	P38266	947 aa	Known RBP	3.83	□□□□□ -1.8
PIM1	YBL022C	PAC1	P39946	494 aa	Known RBP	3.83	□□□□□ -1.8
PIM1	YBL022C	RRG9	P40156	214 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	KTR7	P40504	517 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	RPS12	P48589	143 aa	Known RBP	3.83	□□□□□ -1.8
PIM1	YBL022C	RRN5	Q02983	363 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	RPN4	Q03465	531 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	NHX1	Q04121	633 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	YMR130W	Q04223	302 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	SEC13	Q04491	297 aa	Known RBP	3.83	□□□□□ -1.8
PIM1	YBL022C	TVP18	Q04767	167 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	AIM39	Q08223	395 aa		3.83	□□□□□ -1.8
PIM1	YBL022C	IES4	Q08561	116 aa		3.83	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms