RNA–Protein interactions for RNA: ENST00000629137.1

SPTAN1-218, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-218ENST00000629137 SCN5AQ14524 2016 aa10.38□□□□□ -0.75
SPTAN1-218ENST00000629137 ZBTB39O15060 712 aa10.38□□□□□ -0.75
SPTAN1-218ENST00000629137 HBP1O60381 514 aa10.38□□□□□ -0.75
SPTAN1-218ENST00000629137 CTSHP09668 335 aa10.38□□□□□ -0.75
SPTAN1-218ENST00000629137 IQCF3P0C7M6 154 aa10.38□□□□□ -0.75
SPTAN1-218ENST00000629137 GNAT1P11488 350 aa10.38□□□□□ -0.75
SPTAN1-218ENST00000629137 THPOP40225 353 aa10.38□□□□□ -0.75
SPTAN1-218ENST00000629137 FPGSQ05932 587 aa10.38□□□□□ -0.75
SPTAN1-218ENST00000629137 CTTNQ14247 550 aaKnown RBP10.38□□□□□ -0.75
SPTAN1-218ENST00000629137 EPHA7Q15375 998 aa10.38□□□□□ -0.75
SPTAN1-218ENST00000629137 IL17AQ16552 155 aa10.38□□□□□ -0.75
SPTAN1-218ENST00000629137 C9orf50Q5SZB4 431 aa10.38□□□□□ -0.75
SPTAN1-218ENST00000629137 FOXD4L5Q5VV16 416 aaPredicted RBP10.38□□□□□ -0.75
SPTAN1-218ENST00000629137 SMYD5Q6GMV2 418 aa10.38□□□□□ -0.75
SPTAN1-218ENST00000629137 MTHFD1LQ6UB35 978 aa10.38□□□□□ -0.75
SPTAN1-218ENST00000629137 BRAPQ7Z569 592 aa10.38□□□□□ -0.75
SPTAN1-218ENST00000629137 TMEM199Q8N511 208 aa10.38□□□□□ -0.75
SPTAN1-218ENST00000629137 CAGE1Q8TC20 777 aa10.38□□□□□ -0.75
SPTAN1-218ENST00000629137 FOXD4L4Q8WXT5 416 aaPredicted RBP10.38□□□□□ -0.75
SPTAN1-218ENST00000629137 EIF2AK1Q9BQI3 630 aaKnown RBP10.38□□□□□ -0.75
SPTAN1-218ENST00000629137 LXNQ9BS40 222 aa10.38□□□□□ -0.75
SPTAN1-218ENST00000629137 OSBPL7Q9BZF2 842 aa10.38□□□□□ -0.75
SPTAN1-218ENST00000629137 FTOQ9C0B1 505 aaKnown RBP eCLIP10.38□□□□□ -0.75
SPTAN1-218ENST00000629137 CEP290O15078 2479 aa10.38□□□□□ -0.75
SPTAN1-218ENST00000629137 SIP14410 1827 aa10.37□□□□□ -0.75
SPTAN1-218ENST00000629137 A0A087WWV3 80 aa10.37□□□□□ -0.75
SPTAN1-218ENST00000629137 RRN3P2A6NIE6 340 aa10.37□□□□□ -0.75
SPTAN1-218ENST00000629137 SLITRK3O94933 977 aa10.37□□□□□ -0.75
SPTAN1-218ENST00000629137 C22orf31O95567 290 aa10.37□□□□□ -0.75
SPTAN1-218ENST00000629137 P4HBP07237 508 aaKnown RBP10.37□□□□□ -0.75
SPTAN1-218ENST00000629137 KLRC1P26715 233 aa10.37□□□□□ -0.75
SPTAN1-218ENST00000629137 BMP8BP34820 402 aa10.37□□□□□ -0.75
SPTAN1-218ENST00000629137 QARSP47897 775 aaKnown RBP10.37□□□□□ -0.75
SPTAN1-218ENST00000629137 PSMC5P62195 406 aa10.37□□□□□ -0.75
SPTAN1-218ENST00000629137 KCNC4Q03721 635 aa10.37□□□□□ -0.75
SPTAN1-218ENST00000629137 RBL2Q08999 1139 aa10.37□□□□□ -0.75
SPTAN1-218ENST00000629137 MBTPS1Q14703 1052 aa10.37□□□□□ -0.75
SPTAN1-218ENST00000629137 SHHQ15465 462 aa10.37□□□□□ -0.75
SPTAN1-218ENST00000629137 MTERF2Q49AM1 385 aa10.37□□□□□ -0.75
SPTAN1-218ENST00000629137 ZNF484Q5JVG2 852 aa10.37□□□□□ -0.75
SPTAN1-218ENST00000629137 PLA2G4FQ68DD2 849 aa10.37□□□□□ -0.75
SPTAN1-218ENST00000629137 ANO5Q75V66 913 aa10.37□□□□□ -0.75
SPTAN1-218ENST00000629137 LRRC8DQ7L1W4 858 aa10.37□□□□□ -0.75
SPTAN1-218ENST00000629137 DEFB128Q7Z7B8 93 aa10.37□□□□□ -0.75
SPTAN1-218ENST00000629137 TPH2Q8IWU9 490 aa10.37□□□□□ -0.75
SPTAN1-218ENST00000629137 CCDC155Q8N6L0 562 aa10.37□□□□□ -0.75
SPTAN1-218ENST00000629137 RETREG2Q8NC44 543 aa10.37□□□□□ -0.75
SPTAN1-218ENST00000629137 DNAJB3Q8WWF6 145 aa10.37□□□□□ -0.75
SPTAN1-218ENST00000629137 CEP89Q96ST8 783 aa10.37□□□□□ -0.75
SPTAN1-218ENST00000629137 HSD17B14Q9BPX1 270 aa10.37□□□□□ -0.75
SPTAN1-218ENST00000629137 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.37□□□□□ -0.75
SPTAN1-218ENST00000629137 FAM49AQ9H0Q0 323 aaPredicted RBP10.37□□□□□ -0.75
SPTAN1-218ENST00000629137 CLIC4Q9Y696 253 aa10.37□□□□□ -0.75
SPTAN1-218ENST00000629137 COL1A2P08123 1366 aa10.37□□□□□ -0.75
SPTAN1-218ENST00000629137 MYH9P35579 1960 aaKnown RBP10.36□□□□□ -0.75
SPTAN1-218ENST00000629137 DDX11L8A8MPP1 907 aa10.36□□□□□ -0.75
SPTAN1-218ENST00000629137 PP2D1A8MPX8 630 aa10.36□□□□□ -0.75
SPTAN1-218ENST00000629137 GPR37O15354 613 aa10.36□□□□□ -0.75
SPTAN1-218ENST00000629137 NBNO60934 754 aa10.36□□□□□ -0.75
SPTAN1-218ENST00000629137 MED24O75448 989 aa10.36□□□□□ -0.75
SPTAN1-218ENST00000629137 SPATA31C1P0DKV0 1188 aa10.36□□□□□ -0.75
SPTAN1-218ENST00000629137 SELPP16109 830 aa10.36□□□□□ -0.75
SPTAN1-218ENST00000629137 NPEPPSP55786 919 aa10.36□□□□□ -0.75
SPTAN1-218ENST00000629137 ATP2C1P98194 919 aaPredicted RBP10.36□□□□□ -0.75
SPTAN1-218ENST00000629137 TMEM62Q0P6H9 643 aa10.36□□□□□ -0.75
SPTAN1-218ENST00000629137 SF3A1Q15459 793 aaKnown RBP10.36□□□□□ -0.75
SPTAN1-218ENST00000629137 TARBP2Q15633 366 aaKnown RBP10.36□□□□□ -0.75
SPTAN1-218ENST00000629137 TCTN1Q2MV58 587 aa10.36□□□□□ -0.75
SPTAN1-218ENST00000629137 XKR3Q5GH77 459 aa10.36□□□□□ -0.75
SPTAN1-218ENST00000629137 LRRC71Q8N4P6 559 aa10.36□□□□□ -0.75
SPTAN1-218ENST00000629137 TNPO1Q92973 898 aaKnown RBP10.36□□□□□ -0.75
SPTAN1-218ENST00000629137 FAM167AQ96KS9 214 aa10.36□□□□□ -0.75
SPTAN1-218ENST00000629137 NIFKQ9BYG3 293 aaKnown RBP10.36□□□□□ -0.75
SPTAN1-218ENST00000629137 IL23AQ9NPF7 189 aa10.36□□□□□ -0.75
SPTAN1-218ENST00000629137 NRBP2Q9NSY0 501 aa10.36□□□□□ -0.75
SPTAN1-218ENST00000629137 PCDHA2Q9Y5H9 948 aa10.36□□□□□ -0.75
SPTAN1-218ENST00000629137 SZT2Q5T011 3432 aa10.36□□□□□ -0.75
SPTAN1-218ENST00000629137 MYH15Q9Y2K3 1946 aa10.35□□□□□ -0.75
SPTAN1-218ENST00000629137 SMIM35A0A1B0GVV1 85 aa10.35□□□□□ -0.75
SPTAN1-218ENST00000629137 RSPH10B2B2RC85 870 aa10.35□□□□□ -0.75
SPTAN1-218ENST00000629137 LAD1O00515 517 aa10.35□□□□□ -0.75
SPTAN1-218ENST00000629137 CHRNA1P02708 482 aa10.35□□□□□ -0.75
SPTAN1-218ENST00000629137 RSPH10BP0C881 870 aa10.35□□□□□ -0.75
SPTAN1-218ENST00000629137 FECHP22830 423 aa10.35□□□□□ -0.75
SPTAN1-218ENST00000629137 CDC25AP30304 524 aa10.35□□□□□ -0.75
SPTAN1-218ENST00000629137 YWHABP31946 246 aaKnown RBP10.35□□□□□ -0.75
SPTAN1-218ENST00000629137 PRPHP41219 470 aa10.35□□□□□ -0.75
SPTAN1-218ENST00000629137 CLCN3P51790 818 aa10.35□□□□□ -0.75
SPTAN1-218ENST00000629137 CEBPZQ03701 1054 aaKnown RBP10.35□□□□□ -0.75
SPTAN1-218ENST00000629137 GRIN1Q05586 938 aa10.35□□□□□ -0.75
SPTAN1-218ENST00000629137 MGAT3Q09327 533 aa10.35□□□□□ -0.75
SPTAN1-218ENST00000629137 PPIGQ13427 754 aaKnown RBP eCLIP10.35□□□□□ -0.75
SPTAN1-218ENST00000629137 ECM1Q16610 540 aa10.35□□□□□ -0.75
SPTAN1-218ENST00000629137 FOXD4L6Q3SYB3 417 aaPredicted RBP10.35□□□□□ -0.75
SPTAN1-218ENST00000629137 TMEM240Q5SV17 173 aa10.35□□□□□ -0.75
SPTAN1-218ENST00000629137 TAF2Q6P1X5 1199 aa10.35□□□□□ -0.75
SPTAN1-218ENST00000629137 FOXD4L3Q6VB84 417 aaPredicted RBP10.35□□□□□ -0.75
SPTAN1-218ENST00000629137 ZNF365Q70YC5 407 aa10.35□□□□□ -0.75
SPTAN1-218ENST00000629137 CATSPER3Q86XQ3 398 aa10.35□□□□□ -0.75
SPTAN1-218ENST00000629137 C4orf19Q8IY42 314 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms