RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 ATP6V1HQ9UI12 483 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 NRXN3Q9Y4C0 1643 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 AATKQ6ZMQ8 1374 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 RPAP1Q9BWH6 1393 aaPredicted RBP4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 ERICH2A1L162 156 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 B4DLN1 442 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 GCOM1H8Y6P7 765 aaPredicted RBP4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 INO80B-WBP1J3KQ70 363 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 AXIN1O15169 862 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 WDR46O15213 610 aaKnown RBP4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 DGKIO75912 1065 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 KCNH1O95259 989 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 HEXBP07686 556 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 SRGNP10124 158 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 RAC2P15153 192 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 PRLRP16471 622 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 IL32P24001 234 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 ZNF76P36508 570 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 YARSP54577 528 aaKnown RBP4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 ACTN3Q08043 901 aaPredicted RBP4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 SP140Q13342 867 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 MINDY4Q4G0A6 757 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 PPP6R3Q5H9R7 873 aaPredicted RBP4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 FAM83BQ5T0W9 1011 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 KDELC2Q7Z4H8 507 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 ARL8AQ96BM9 186 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 MAELQ96JY0 434 aaKnown RBP4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 DDX50Q9BQ39 737 aaKnown RBP4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 ATP13A3Q9H7F0 1226 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 TUFT1Q9NNX1 390 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 SENP1Q9P0U3 644 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 ATXN10Q9UBB4 475 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 CHMP2BQ9UQN3 213 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 UNC80Q8N2C7 3258 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 IQANK1A0A1B0GTG1 560 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 UBXN8O00124 270 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 MAP2K7O14733 419 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 F13A1P00488 732 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 THEGLP0DJG4 465 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 ATP6V1B1P15313 513 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 CES1P23141 567 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 KRT2P35908 639 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 SARSP49591 514 aaKnown RBP4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 KRT85P78386 507 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 TMEM62Q0P6H9 643 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 TCIRG1Q13488 830 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 KRT32Q14532 448 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 CRY1Q16526 586 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 VPS53Q5VIR6 699 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 CAND1Q86VP6 1230 aaKnown RBP4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 C10orf53Q8N6V4 93 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 PJA1Q8NG27 643 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 CEP95Q96GE4 821 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 RBM18Q96H35 190 aaKnown RBP4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 CCDC42Q96M95 316 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 RIOK1Q9BRS2 568 aaKnown RBP4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 KATNAL1Q9BW62 490 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 REPIN1Q9BWE0 567 aaKnown RBP4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 MFRPQ9BY79 579 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 NAT10Q9H0A0 1025 aaKnown RBP4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 VPS11Q9H270 941 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 MYO1AQ9UBC5 1043 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 HERC5Q9UII4 1024 aaKnown RBP4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 USP16Q9Y5T5 823 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 RGS12O14924 1447 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 CHGBP05060 677 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 CLUP10909 449 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 EPB41P11171 864 aaKnown RBP4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 STAT3P40763 770 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 PLTPP55058 493 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 ZNF211Q13398 564 aaPredicted RBP4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 TUBB2AQ13885 445 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 FLOT2Q14254 428 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 ARHGAP44Q17R89 818 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 TMEM95Q3KNT9 176 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 KRT71Q3SY84 523 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 USH1GQ495M9 461 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 RC3H1Q5TC82 1133 aaKnown RBP4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 ERAP2Q6P179 960 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 MTHFD1LQ6UB35 978 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 GALNT13Q8IUC8 556 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 TEX9Q8N6V9 391 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 DEPTORQ8TB45 409 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 WDR60Q8WVS4 1066 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 STON2Q8WXE9 905 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 RILPL2Q969X0 211 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 CHAMP1Q96JM3 812 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 PPP1R13BQ96KQ4 1090 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 NLRP3Q96P20 1036 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 HNRNPABQ99729 332 aaKnown RBP4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 GAL3ST1Q99999 423 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 CCDC28BQ9BUN5 200 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 TUBB2BQ9BVA1 445 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 BRINP2Q9C0B6 783 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 ZWILCHQ9H900 591 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 RPRD1BQ9NQG5 326 aaKnown RBP4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 USP40Q9NVE5 1235 aa4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 AKAP7Q9P0M2 348 aaPredicted RBP4.18□□□□□ -1.74
R3HDM1-220ENST00000628915 STIM2Q9P246 746 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms