RNA–Protein interactions for RNA: ENST00000599040.5

FARP1-226, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-226ENST00000599040 CLK2P49760 499 aaKnown RBP10.48□□□□□ -0.73
FARP1-226ENST00000599040 SLC26A2P50443 739 aa10.48□□□□□ -0.73
FARP1-226ENST00000599040 ERVK-21P61565 698 aa10.48□□□□□ -0.73
FARP1-226ENST00000599040 GRB10Q13322 594 aa10.48□□□□□ -0.73
FARP1-226ENST00000599040 HIC1Q14526 733 aa10.48□□□□□ -0.73
FARP1-226ENST00000599040 GRIK4Q16099 956 aa10.48□□□□□ -0.73
FARP1-226ENST00000599040 CALCRLQ16602 461 aa10.48□□□□□ -0.73
FARP1-226ENST00000599040 CEP55Q53EZ4 464 aa10.48□□□□□ -0.73
FARP1-226ENST00000599040 FAM26DQ5JW98 314 aa10.48□□□□□ -0.73
FARP1-226ENST00000599040 PPP4R3AQ6IN85 833 aa10.48□□□□□ -0.73
FARP1-226ENST00000599040 FAM117BQ6P1L5 589 aa10.48□□□□□ -0.73
FARP1-226ENST00000599040 MOXD1Q6UVY6 613 aa10.48□□□□□ -0.73
FARP1-226ENST00000599040 CEP57L1Q8IYX8 460 aa10.48□□□□□ -0.73
FARP1-226ENST00000599040 YME1L1Q96TA2 773 aa10.48□□□□□ -0.73
FARP1-226ENST00000599040 IFIH1Q9BYX4 1025 aaKnown RBP10.48□□□□□ -0.73
FARP1-226ENST00000599040 TSPY26PQ9H489 355 aa10.48□□□□□ -0.73
FARP1-226ENST00000599040 PRDM6Q9NQX0 595 aa10.48□□□□□ -0.73
FARP1-226ENST00000599040 KCNH7Q9NS40 1196 aa10.48□□□□□ -0.73
FARP1-226ENST00000599040 PKD2L1Q9P0L9 805 aa10.48□□□□□ -0.73
FARP1-226ENST00000599040 CCDC39Q9UFE4 941 aa10.48□□□□□ -0.73
FARP1-226ENST00000599040 FBXO2Q9UK22 296 aaPredicted RBP10.48□□□□□ -0.73
FARP1-226ENST00000599040 KCNH3Q9ULD8 1083 aa10.48□□□□□ -0.73
FARP1-226ENST00000599040 SIP14410 1827 aa10.48□□□□□ -0.73
FARP1-226ENST00000599040 GSTTP1A0A1W2PQM5 241 aa10.47□□□□□ -0.73
FARP1-226ENST00000599040 SYCE3A1L190 88 aa10.47□□□□□ -0.73
FARP1-226ENST00000599040 LCHNA4D1U4 455 aa10.47□□□□□ -0.73
FARP1-226ENST00000599040 LINC01553A4QN01 128 aa10.47□□□□□ -0.73
FARP1-226ENST00000599040 VWA3AA6NCI4 1184 aa10.47□□□□□ -0.73
FARP1-226ENST00000599040 FAM205CA6NFA0 338 aa10.47□□□□□ -0.73
FARP1-226ENST00000599040 RFXAPO00287 272 aa10.47□□□□□ -0.73
FARP1-226ENST00000599040 CAVIN2O95810 425 aa10.47□□□□□ -0.73
FARP1-226ENST00000599040 PFKFB1P16118 471 aa10.47□□□□□ -0.73
FARP1-226ENST00000599040 MARK3P27448 753 aa10.47□□□□□ -0.73
FARP1-226ENST00000599040 SREBF1P36956 1147 aa10.47□□□□□ -0.73
FARP1-226ENST00000599040 ADAM17P78536 824 aa10.47□□□□□ -0.73
FARP1-226ENST00000599040 SETQ01105 290 aaPredicted RBP10.47□□□□□ -0.73
FARP1-226ENST00000599040 PTPROQ16827 1216 aa10.47□□□□□ -0.73
FARP1-226ENST00000599040 EARS2Q5JPH6 523 aaKnown RBP10.47□□□□□ -0.73
FARP1-226ENST00000599040 AXDND1Q5T1B0 1012 aaPredicted RBP10.47□□□□□ -0.73
FARP1-226ENST00000599040 IER5Q5VY09 327 aa10.47□□□□□ -0.73
FARP1-226ENST00000599040 FAM160B1Q5W0V3 765 aa10.47□□□□□ -0.73
FARP1-226ENST00000599040 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.47□□□□□ -0.73
FARP1-226ENST00000599040 FAM43BQ6ZT52 329 aaPredicted RBP10.47□□□□□ -0.73
FARP1-226ENST00000599040 NIPA1Q7RTP0 329 aa10.47□□□□□ -0.73
FARP1-226ENST00000599040 TMCO2Q7Z6W1 182 aaPredicted RBP10.47□□□□□ -0.73
FARP1-226ENST00000599040 SLFN12Q8IYM2 578 aa10.47□□□□□ -0.73
FARP1-226ENST00000599040 CNNM3Q8NE01 707 aa10.47□□□□□ -0.73
FARP1-226ENST00000599040 FBXO22Q8NEZ5 403 aa10.47□□□□□ -0.73
FARP1-226ENST00000599040 ADAMTS19Q8TE59 1207 aa10.47□□□□□ -0.73
FARP1-226ENST00000599040 CDK5RAP3Q96JB5 506 aa10.47□□□□□ -0.73
FARP1-226ENST00000599040 UHRF1Q96T88 793 aaPredicted RBP10.47□□□□□ -0.73
FARP1-226ENST00000599040 TMEM260Q9NX78 707 aa10.47□□□□□ -0.73
FARP1-226ENST00000599040 DDX25Q9UHL0 483 aaKnown RBP10.47□□□□□ -0.73
FARP1-226ENST00000599040 MTUS1Q9ULD2 1270 aa10.47□□□□□ -0.73
FARP1-226ENST00000599040 TRPC6Q9Y210 931 aa10.47□□□□□ -0.73
FARP1-226ENST00000599040 COL4A4P53420 1690 aaPredicted RBP10.47□□□□□ -0.73
FARP1-226ENST00000599040 FAM237AA0A1B0GTK4 181 aa10.46□□□□□ -0.73
FARP1-226ENST00000599040 MBLAC1A4D2B0 266 aaPredicted RBP10.46□□□□□ -0.73
FARP1-226ENST00000599040 EPOPA6NHQ4 379 aa10.46□□□□□ -0.73
FARP1-226ENST00000599040 ZNF202O95125 648 aa10.46□□□□□ -0.73
FARP1-226ENST00000599040 MRE11P49959 708 aa10.46□□□□□ -0.73
FARP1-226ENST00000599040 STAT5BP51692 787 aa10.46□□□□□ -0.73
FARP1-226ENST00000599040 NDUFA8P51970 172 aa10.46□□□□□ -0.73
FARP1-226ENST00000599040 ACTR2P61160 394 aa10.46□□□□□ -0.73
FARP1-226ENST00000599040 HTRA4P83105 476 aaPredicted RBP10.46□□□□□ -0.73
FARP1-226ENST00000599040 PLPPR4Q7Z2D5 763 aa10.46□□□□□ -0.73
FARP1-226ENST00000599040 FMR1NBQ8N0W7 255 aaPredicted RBP10.46□□□□□ -0.73
FARP1-226ENST00000599040 IQUBQ8NA54 791 aa10.46□□□□□ -0.73
FARP1-226ENST00000599040 SP7Q8TDD2 431 aaPredicted RBP10.46□□□□□ -0.73
FARP1-226ENST00000599040 GDPD5Q8WTR4 605 aa10.46□□□□□ -0.73
FARP1-226ENST00000599040 HLA-CQ95604 372 aa10.46□□□□□ -0.73
FARP1-226ENST00000599040 TOP1MTQ969P6 601 aa10.46□□□□□ -0.73
FARP1-226ENST00000599040 CALML4Q96GE6 196 aa10.46□□□□□ -0.73
FARP1-226ENST00000599040 CLIC6Q96NY7 704 aa10.46□□□□□ -0.73
FARP1-226ENST00000599040 NAT10Q9H0A0 1025 aaKnown RBP10.46□□□□□ -0.73
FARP1-226ENST00000599040 CSRNP2Q9H175 543 aa10.46□□□□□ -0.73
FARP1-226ENST00000599040 AGO4Q9HCK5 861 aaKnown RBP10.46□□□□□ -0.73
FARP1-226ENST00000599040 RWDD3Q9Y3V2 267 aa10.46□□□□□ -0.73
FARP1-226ENST00000599040 COL4A6Q14031 1691 aa10.46□□□□□ -0.74
FARP1-226ENST00000599040 POTEB3A0JP26 581 aa10.45□□□□□ -0.74
FARP1-226ENST00000599040 MEIS1O00470 390 aa10.45□□□□□ -0.74
FARP1-226ENST00000599040 BACH1O14867 736 aa10.45□□□□□ -0.74
FARP1-226ENST00000599040 TBX3O15119 743 aa10.45□□□□□ -0.74
FARP1-226ENST00000599040 SLC26A4O43511 780 aa10.45□□□□□ -0.74
FARP1-226ENST00000599040 ARHGEF15O94989 841 aa10.45□□□□□ -0.74
FARP1-226ENST00000599040 UPP2O95045 317 aa10.45□□□□□ -0.74
FARP1-226ENST00000599040 SMC2O95347 1197 aa10.45□□□□□ -0.74
FARP1-226ENST00000599040 GHRP10912 638 aa10.45□□□□□ -0.74
FARP1-226ENST00000599040 IGBP1P78318 339 aa10.45□□□□□ -0.74
FARP1-226ENST00000599040 MRPS6P82932 125 aaKnown RBP10.45□□□□□ -0.74
FARP1-226ENST00000599040 MKRN4PQ13434 485 aaPredicted RBP10.45□□□□□ -0.74
FARP1-226ENST00000599040 PDIA5Q14554 519 aa10.45□□□□□ -0.74
FARP1-226ENST00000599040 CAMK4Q16566 473 aa10.45□□□□□ -0.74
FARP1-226ENST00000599040 TCTN1Q2MV58 587 aa10.45□□□□□ -0.74
FARP1-226ENST00000599040 TIGD5Q53EQ6 642 aa10.45□□□□□ -0.74
FARP1-226ENST00000599040 KRT79Q5XKE5 535 aa10.45□□□□□ -0.74
FARP1-226ENST00000599040 MIS18BP1Q6P0N0 1132 aa10.45□□□□□ -0.74
FARP1-226ENST00000599040 POTEBQ6S5H4 581 aa10.45□□□□□ -0.74
FARP1-226ENST00000599040 SHC4Q6S5L8 630 aa10.45□□□□□ -0.74
FARP1-226ENST00000599040 RUFY4Q6ZNE9 571 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms