RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 MTMR1Q13613 665 aa9.96□□□□□ -0.82
SMAD4-215ENST00000592911 SMC1AQ14683 1233 aaKnown RBP9.96□□□□□ -0.82
SMAD4-215ENST00000592911 PAN2Q504Q3 1202 aaKnown RBP9.96□□□□□ -0.82
SMAD4-215ENST00000592911 SPOUT1Q5T280 376 aaKnown RBP9.96□□□□□ -0.82
SMAD4-215ENST00000592911 KIAA1841Q6NSI8 718 aa9.96□□□□□ -0.82
SMAD4-215ENST00000592911 CATIPQ7Z7H3 387 aa9.96□□□□□ -0.82
SMAD4-215ENST00000592911 LRRC43Q8N309 656 aa9.96□□□□□ -0.82
SMAD4-215ENST00000592911 TMEM105Q8N8V8 129 aa9.96□□□□□ -0.82
SMAD4-215ENST00000592911 TMEM117Q9H0C3 514 aa9.96□□□□□ -0.82
SMAD4-215ENST00000592911 TMX1Q9H3N1 280 aa9.96□□□□□ -0.82
SMAD4-215ENST00000592911 BCAS3Q9H6U6 928 aa9.96□□□□□ -0.82
SMAD4-215ENST00000592911 ATP6V0A4Q9HBG4 840 aa9.96□□□□□ -0.82
SMAD4-215ENST00000592911 ZSWIM6Q9HCJ5 1215 aa9.96□□□□□ -0.82
SMAD4-215ENST00000592911 JADE2Q9NQC1 790 aa9.96□□□□□ -0.82
SMAD4-215ENST00000592911 DIAPH3Q9NSV4 1193 aa9.96□□□□□ -0.82
SMAD4-215ENST00000592911 RTEL1Q9NZ71 1219 aa9.96□□□□□ -0.82
SMAD4-215ENST00000592911 SEC63Q9UGP8 760 aaKnown RBP9.96□□□□□ -0.82
SMAD4-215ENST00000592911 UBIAD1Q9Y5Z9 338 aa9.96□□□□□ -0.82
SMAD4-215ENST00000592911 IRAK3Q9Y616 596 aa9.96□□□□□ -0.82
SMAD4-215ENST00000592911 DENND3A2RUS2 1198 aa9.95□□□□□ -0.82
SMAD4-215ENST00000592911 HBP1O60381 514 aa9.95□□□□□ -0.82
SMAD4-215ENST00000592911 RPS6KA5O75582 802 aa9.95□□□□□ -0.82
SMAD4-215ENST00000592911 DDAH1O94760 285 aa9.95□□□□□ -0.82
SMAD4-215ENST00000592911 AOC1P19801 751 aa9.95□□□□□ -0.82
SMAD4-215ENST00000592911 ERVFC1P60507 584 aa9.95□□□□□ -0.82
SMAD4-215ENST00000592911 TDRD5Q8NAT2 981 aaKnown RBP9.95□□□□□ -0.82
SMAD4-215ENST00000592911 RILPL2Q969X0 211 aa9.95□□□□□ -0.82
SMAD4-215ENST00000592911 RRP36Q96EU6 259 aaKnown RBP9.95□□□□□ -0.82
SMAD4-215ENST00000592911 ZNF558Q96NG5 402 aa9.95□□□□□ -0.82
SMAD4-215ENST00000592911 TCF25Q9BQ70 676 aa9.95□□□□□ -0.82
SMAD4-215ENST00000592911 MRPL9Q9BYD2 267 aaKnown RBP9.95□□□□□ -0.82
SMAD4-215ENST00000592911 RHOBTB2Q9BYZ6 727 aa9.95□□□□□ -0.82
SMAD4-215ENST00000592911 MFSD1Q9H3U5 465 aa9.95□□□□□ -0.82
SMAD4-215ENST00000592911 ENTPD7Q9NQZ7 604 aa9.95□□□□□ -0.82
SMAD4-215ENST00000592911 SLC9A2Q9UBY0 812 aa9.95□□□□□ -0.82
SMAD4-215ENST00000592911 NCOR2Q9Y618 2525 aa9.95□□□□□ -0.82
SMAD4-215ENST00000592911 DNAH14Q0VDD8 3507 aa9.94□□□□□ -0.82
SMAD4-215ENST00000592911 IGKV6D-21A0A0A0MT36 114 aa9.94□□□□□ -0.82
SMAD4-215ENST00000592911 SPDYE3A6NKU9 549 aa9.94□□□□□ -0.82
SMAD4-215ENST00000592911 TBKBP1A7MCY6 615 aa9.94□□□□□ -0.82
SMAD4-215ENST00000592911 PER2O15055 1255 aa9.94□□□□□ -0.82
SMAD4-215ENST00000592911 ATG7O95352 703 aa9.94□□□□□ -0.82
SMAD4-215ENST00000592911 BRD1O95696 1058 aa9.94□□□□□ -0.82
SMAD4-215ENST00000592911 ITGB5P18084 799 aa9.94□□□□□ -0.82
SMAD4-215ENST00000592911 MARK3P27448 753 aa9.94□□□□□ -0.82
SMAD4-215ENST00000592911 STAT5BP51692 787 aa9.94□□□□□ -0.82
SMAD4-215ENST00000592911 CRYBB1P53674 252 aaPredicted RBP9.94□□□□□ -0.82
SMAD4-215ENST00000592911 POLGP54098 1239 aaPredicted RBP9.94□□□□□ -0.82
SMAD4-215ENST00000592911 WTAPQ15007 396 aa9.94□□□□□ -0.82
SMAD4-215ENST00000592911 SLC35G1Q2M3R5 365 aa9.94□□□□□ -0.82
SMAD4-215ENST00000592911 ATAT1Q5SQI0 421 aa9.94□□□□□ -0.82
SMAD4-215ENST00000592911 ZC3H14Q6PJT7 736 aaKnown RBP9.94□□□□□ -0.82
SMAD4-215ENST00000592911 MTHFD1LQ6UB35 978 aa9.94□□□□□ -0.82
SMAD4-215ENST00000592911 CYP26C1Q6V0L0 522 aa9.94□□□□□ -0.82
SMAD4-215ENST00000592911 PPFIBP1Q86W92 1011 aa9.94□□□□□ -0.82
SMAD4-215ENST00000592911 CCDC105Q8IYK2 499 aa9.94□□□□□ -0.82
SMAD4-215ENST00000592911 ADSSL1Q8N142 457 aa9.94□□□□□ -0.82
SMAD4-215ENST00000592911 TMTC2Q8N394 836 aa9.94□□□□□ -0.82
SMAD4-215ENST00000592911 MRPL43Q8N983 215 aaKnown RBP9.94□□□□□ -0.82
SMAD4-215ENST00000592911 CTCFLQ8NI51 663 aaPredicted RBP9.94□□□□□ -0.82
SMAD4-215ENST00000592911 NXPE3Q969Y0 559 aa9.94□□□□□ -0.82
SMAD4-215ENST00000592911 ACSF2Q96CM8 615 aaPredicted RBP9.94□□□□□ -0.82
SMAD4-215ENST00000592911 ADAM2Q99965 735 aa9.94□□□□□ -0.82
SMAD4-215ENST00000592911 SDF4Q9BRK5 362 aa9.94□□□□□ -0.82
SMAD4-215ENST00000592911 FAM49AQ9H0Q0 323 aaPredicted RBP9.94□□□□□ -0.82
SMAD4-215ENST00000592911 CWH43Q9H720 699 aa9.94□□□□□ -0.82
SMAD4-215ENST00000592911 TYW1Q9NV66 732 aaKnown RBP9.94□□□□□ -0.82
SMAD4-215ENST00000592911 SPG21Q9NZD8 308 aa9.94□□□□□ -0.82
SMAD4-215ENST00000592911 HCFC2Q9Y5Z7 792 aa9.94□□□□□ -0.82
SMAD4-215ENST00000592911 CACNA1IQ9P0X4 2223 aa9.93□□□□□ -0.82
SMAD4-215ENST00000592911 C2CD4DB7Z1M9 353 aa9.93□□□□□ -0.82
SMAD4-215ENST00000592911 IFIT3O14879 490 aaKnown RBP9.93□□□□□ -0.82
SMAD4-215ENST00000592911 ATP9AO75110 1047 aa9.93□□□□□ -0.82
SMAD4-215ENST00000592911 EOMESO95936 686 aa9.93□□□□□ -0.82
SMAD4-215ENST00000592911 FOSP01100 380 aaPredicted RBP9.93□□□□□ -0.82
SMAD4-215ENST00000592911 SDHBP21912 280 aa9.93□□□□□ -0.82
SMAD4-215ENST00000592911 SP4Q02446 784 aa9.93□□□□□ -0.82
SMAD4-215ENST00000592911 NFX1Q12986 1120 aaKnown RBP9.93□□□□□ -0.82
SMAD4-215ENST00000592911 PUM1Q14671 1186 aaKnown RBP eCLIP9.93□□□□□ -0.82
SMAD4-215ENST00000592911 PLCB4Q15147 1175 aa9.93□□□□□ -0.82
SMAD4-215ENST00000592911 NONOQ15233 471 aaKnown RBP eCLIP9.93□□□□□ -0.82
SMAD4-215ENST00000592911 ZNF484Q5JVG2 852 aa9.93□□□□□ -0.82
SMAD4-215ENST00000592911 LCE2DQ5TA82 110 aaPredicted RBP9.93□□□□□ -0.82
SMAD4-215ENST00000592911 PLPP4Q5VZY2 271 aa9.93□□□□□ -0.82
SMAD4-215ENST00000592911 FAM160B1Q5W0V3 765 aa9.93□□□□□ -0.82
SMAD4-215ENST00000592911 KCNT2Q6UVM3 1135 aa9.93□□□□□ -0.82
SMAD4-215ENST00000592911 CWC27Q6UX04 472 aaKnown RBP9.93□□□□□ -0.82
SMAD4-215ENST00000592911 NIPA1Q7RTP0 329 aa9.93□□□□□ -0.82
SMAD4-215ENST00000592911 OTOP3Q7RTS5 596 aa9.93□□□□□ -0.82
SMAD4-215ENST00000592911 ABI1Q8IZP0 508 aa9.93□□□□□ -0.82
SMAD4-215ENST00000592911 NCOA7Q8NI08 942 aa9.93□□□□□ -0.82
SMAD4-215ENST00000592911 PCYT2Q99447 389 aa9.93□□□□□ -0.82
SMAD4-215ENST00000592911 GLT8D2Q9H1C3 349 aa9.93□□□□□ -0.82
SMAD4-215ENST00000592911 POMKQ9H5K3 350 aa9.93□□□□□ -0.82
SMAD4-215ENST00000592911 PSTPIP2Q9H939 334 aa9.93□□□□□ -0.82
SMAD4-215ENST00000592911 CYP26B1Q9NR63 512 aa9.93□□□□□ -0.82
SMAD4-215ENST00000592911 IGSF9Q9P2J2 1179 aa9.93□□□□□ -0.82
SMAD4-215ENST00000592911 ST3GAL5Q9UNP4 418 aa9.93□□□□□ -0.82
SMAD4-215ENST00000592911 CEP131Q9UPN4 1083 aa9.93□□□□□ -0.82
SMAD4-215ENST00000592911 SUPT16HQ9Y5B9 1047 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms