RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 MRPL47Q9HD33 250 aaKnown RBP6.83□□□□□ -1.32
SMAD4-212ENST00000591126 G3BP2Q9UN86 482 aaKnown RBP6.83□□□□□ -1.32
SMAD4-212ENST00000591126 TRPV2Q9Y5S1 764 aa6.83□□□□□ -1.32
SMAD4-212ENST00000591126 MARK3P27448 753 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 IRF5Q13568 498 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 BTG3Q14201 252 aaPredicted RBP6.82□□□□□ -1.32
SMAD4-212ENST00000591126 PADI6Q6TGC4 694 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 NT5DC4Q86YG4 428 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 RHPN2Q8IUC4 686 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 CCDC50Q8IVM0 306 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 SENP6Q9GZR1 1112 aaPredicted RBP6.82□□□□□ -1.32
SMAD4-212ENST00000591126 ZNF609O15014 1411 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 PVALEFA0A1B0GWK0 134 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 RSPH10B2B2RC85 870 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 ADCY6O43306 1168 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 RNASEH1O60930 286 aaKnown RBP6.82□□□□□ -1.32
SMAD4-212ENST00000591126 ALDH2P05091 517 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 RSPH10BP0C881 870 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 TFAMQ00059 246 aaKnown RBP6.82□□□□□ -1.32
SMAD4-212ENST00000591126 NFE2Q16621 373 aaPredicted RBP6.82□□□□□ -1.32
SMAD4-212ENST00000591126 TLK2Q86UE8 772 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 RAB42Q8N4Z0 105 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 SLC44A5Q8NCS7 719 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.82□□□□□ -1.32
SMAD4-212ENST00000591126 TBC1D31Q96DN5 1066 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 KLRG1Q96E93 195 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 ZFP91Q96JP5 570 aaPredicted RBP6.82□□□□□ -1.32
SMAD4-212ENST00000591126 TIGD1Q96MW7 591 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 STN1Q9H668 368 aaKnown RBP6.82□□□□□ -1.32
SMAD4-212ENST00000591126 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.82□□□□□ -1.32
SMAD4-212ENST00000591126 UTP6Q9NYH9 597 aaKnown RBP6.82□□□□□ -1.32
SMAD4-212ENST00000591126 UBQLN1Q9UMX0 589 aaKnown RBP6.82□□□□□ -1.32
SMAD4-212ENST00000591126 TLR2O60603 784 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 ODC1P11926 461 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 EPHB3P54753 998 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 C1QTNF8P60827 252 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 SMARCB1Q12824 385 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 PCNX4Q63HM2 1172 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 CYP4F22Q6NT55 531 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 GSTA5Q7RTV2 222 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 MRPS31Q92665 395 aaKnown RBP6.82□□□□□ -1.32
SMAD4-212ENST00000591126 RIPOR3Q96MK2 946 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 TCEANC2Q96MN5 208 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 ANTXR1Q9H6X2 564 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 KIF9Q9HAQ2 790 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 NMRK2Q9NPI5 230 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 ZNF197O14709 1029 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 LAG3P18627 525 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 RASA1P20936 1047 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 GARTP22102 1010 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 CMA1P23946 247 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 ALDH3A1P30838 453 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 ARL4AP40617 200 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 LAMB3Q13751 1172 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 SLFNL1Q499Z3 407 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 IFNL1Q8IU54 200 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 MICALL1Q8N3F8 863 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 SLITRK1Q96PX8 696 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 MYL10Q9BUA6 226 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 NRCAMQ92823 1304 aa6.82□□□□□ -1.32
SMAD4-212ENST00000591126 GOLGA6L7A0A1B0GV03 622 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 A0A1W2PQ27 194 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 A0A1W2PQ64 194 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 A0A1W2PQD8 194 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 PRKCBP05771 671 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 PLA2G4BP0C869 781 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 SSTR3P32745 418 aaPredicted RBP6.81□□□□□ -1.32
SMAD4-212ENST00000591126 PSEN2P49810 448 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 LRRC63Q05C16 580 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 KRT81Q14533 505 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 NLGN2Q8NFZ4 835 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 CSGALNACT1Q8TDX6 532 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 AKAP7Q9P0M2 348 aaPredicted RBP6.81□□□□□ -1.32
SMAD4-212ENST00000591126 TUBE1Q9UJT0 475 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 SH3BP1Q9Y3L3 701 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 SPOPO43791 374 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 SLC2A3P11169 496 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 NSFP46459 744 aaKnown RBP6.81□□□□□ -1.32
SMAD4-212ENST00000591126 LMNB2Q03252 620 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 TSGA10IPQ3SY00 556 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 GPR142Q7Z601 462 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 PROM2Q8N271 834 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 ZNF558Q96NG5 402 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 IQCGQ9H095 443 aaKnown RBP6.81□□□□□ -1.32
SMAD4-212ENST00000591126 POLR3FQ9H1D9 316 aaPredicted RBP6.81□□□□□ -1.32
SMAD4-212ENST00000591126 MTRF1LQ9UGC7 380 aaKnown RBP6.81□□□□□ -1.32
SMAD4-212ENST00000591126 SRRDQ9UH36 339 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 KCNJ14Q9UNX9 436 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 PQBP1O60828 265 aaKnown RBP6.81□□□□□ -1.32
SMAD4-212ENST00000591126 EYA4O95677 639 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 PRKAR2AP13861 404 aaKnown RBP6.81□□□□□ -1.32
SMAD4-212ENST00000591126 IGFBP4P22692 258 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 HOXA13P31271 388 aaPredicted RBP6.81□□□□□ -1.32
SMAD4-212ENST00000591126 FKBP3Q00688 224 aaKnown RBP6.81□□□□□ -1.32
SMAD4-212ENST00000591126 ADAM9Q13443 819 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 MFSD10Q14728 455 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 ZNF280DQ6N043 979 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 CEP57Q86XR8 500 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 PALM2Q8IXS6 379 aa6.81□□□□□ -1.32
SMAD4-212ENST00000591126 LSG1Q9H089 658 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms